RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 GUF1Q8N442 669 aaKnown RBP8.45□□□□□ -1.06
SMG1-214ENST00000568038 GIMAP7Q8NHV1 300 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 NELFBQ8WX92 580 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 HVCN1Q96D96 273 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 FAM129BQ96TA1 746 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 FUCA2Q9BTY2 467 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 MRPL4Q9BYD3 311 aaKnown RBP8.45□□□□□ -1.06
SMG1-214ENST00000568038 WNT8AQ9H1J5 351 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 DNAJC25Q9H1X3 360 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 TMEM206Q9H813 350 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 PRMT7Q9NVM4 692 aaPredicted RBP8.45□□□□□ -1.06
SMG1-214ENST00000568038 ST3GAL5Q9UNP4 418 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 UBE4BO95155 1302 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 TRIM49BA6NDI0 452 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 EIF1AYO14602 144 aaKnown RBP8.44□□□□□ -1.06
SMG1-214ENST00000568038 HNRNPDLO14979 420 aaKnown RBP8.44□□□□□ -1.06
SMG1-214ENST00000568038 CLIC2O15247 247 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 EIF4EBP3O60516 100 aaPredicted RBP8.44□□□□□ -1.06
SMG1-214ENST00000568038 TSPAN1O60635 241 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 ECEL1O95672 775 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 TIMP1P01033 207 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 HARSP12081 509 aaKnown RBP8.44□□□□□ -1.06
SMG1-214ENST00000568038 ARF4P18085 180 aaPredicted RBP8.44□□□□□ -1.06
SMG1-214ENST00000568038 SCP2P22307 547 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 ABCD1P33897 745 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 PPP1R2P41236 205 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 PMS1P54277 932 aaKnown RBP8.44□□□□□ -1.06
SMG1-214ENST00000568038 NCBP1Q09161 790 aaKnown RBP8.44□□□□□ -1.06
SMG1-214ENST00000568038 PAK1Q13153 545 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 GPNMBQ14956 572 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 BMT2Q1RMZ1 405 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 ANO6Q4KMQ2 910 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 COBLL1Q53SF7 1204 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 ATF7IP2Q5U623 682 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 EEF1DP3Q658K8 133 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 ANKRD40Q6AI12 368 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 LRSAM1Q6UWE0 723 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 USP38Q8NB14 1042 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 KCNN1Q92952 543 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 P2RX5Q93086 422 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 CCDC74AQ96AQ1 378 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 DHTKD1Q96HY7 919 aaPredicted RBP8.44□□□□□ -1.06
SMG1-214ENST00000568038 ZBTB45Q96K62 511 aaPredicted RBP8.44□□□□□ -1.06
SMG1-214ENST00000568038 ACO2Q99798 780 aaKnown RBP8.44□□□□□ -1.06
SMG1-214ENST00000568038 TSG101Q99816 390 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 CORO1BQ9BR76 489 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 TCHPQ9BT92 498 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 OSBPL1AQ9BXW6 950 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 IFIH1Q9BYX4 1025 aaKnown RBP8.44□□□□□ -1.06
SMG1-214ENST00000568038 NRSN2Q9GZP1 204 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 GBP3Q9H0R5 595 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 KCTD10Q9H3F6 313 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 TSPY26PQ9H489 355 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 ERVK-5Q9HDB9 667 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 ANKFY1Q9P2R3 1169 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 ZMYND8Q9ULU4 1186 aaPredicted RBP8.44□□□□□ -1.06
SMG1-214ENST00000568038 PADI3Q9ULW8 664 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 PIN4Q9Y237 131 aaKnown RBP8.44□□□□□ -1.06
SMG1-214ENST00000568038 SQORQ9Y6N5 450 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 ALPK3Q96L96 1907 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 ZMYM2Q9UBW7 1377 aa8.44□□□□□ -1.06
SMG1-214ENST00000568038 BICDL2A1A5D9 508 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 PDXKO00764 312 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 N4BP3O15049 544 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 TGFB1I1O43294 461 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 CALUO43852 315 aaPredicted RBP8.43□□□□□ -1.06
SMG1-214ENST00000568038 PARNO95453 639 aaKnown RBP8.43□□□□□ -1.06
SMG1-214ENST00000568038 PIGRP01833 764 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 F13BP05160 661 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 ADH5P11766 374 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 CSF2RAP15509 400 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 RAB6AP20340 208 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 IBSPP21815 317 aaPredicted RBP8.43□□□□□ -1.06
SMG1-214ENST00000568038 CCNE1P24864 410 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 AXLP30530 894 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 HOXA11P31270 313 aaPredicted RBP8.43□□□□□ -1.06
SMG1-214ENST00000568038 CYP2J2P51589 502 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 GP2P55259 537 aaKnown RBP8.43□□□□□ -1.06
SMG1-214ENST00000568038 ZNF445P59923 1031 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 PDE4CQ08493 712 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 PCBP1Q15365 356 aaKnown RBP eCLIP8.43□□□□□ -1.06
SMG1-214ENST00000568038 ZNF568Q3ZCX4 644 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 TWF2Q6IBS0 349 aaKnown RBP8.43□□□□□ -1.06
SMG1-214ENST00000568038 CENPPQ6IPU0 288 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 ARMCX5Q6P1M9 558 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 SLC39A4Q6P5W5 647 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 ZPBP2Q6X784 338 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 HS2ST1Q7LGA3 356 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 TMEM199Q8N511 208 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 DBF4BQ8NFT6 615 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 NOC3LQ8WTT2 800 aaKnown RBP8.43□□□□□ -1.06
SMG1-214ENST00000568038 POMGNT1Q8WZA1 660 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 SEPT8Q92599 483 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 BADQ92934 168 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 CITED4Q96RK1 184 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 MED15Q96RN5 788 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 CBWD1Q9BRT8 395 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 ANP32EQ9BTT0 268 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 PCIF1Q9H4Z3 704 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 PDZD7Q9H5P4 517 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms