RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 PDZD4Q76G19 769 aaPredicted RBP5.17□□□□□ -1.58
CLK3-219ENST00000567805 METTL23Q86XA0 190 aa5.17□□□□□ -1.58
CLK3-219ENST00000567805 BRSK2Q8IWQ3 736 aa5.17□□□□□ -1.58
CLK3-219ENST00000567805 NPAS3Q8IXF0 933 aa5.17□□□□□ -1.58
CLK3-219ENST00000567805 EFCAB13Q8IY85 973 aa5.17□□□□□ -1.58
CLK3-219ENST00000567805 GPD1LQ8N335 351 aa5.17□□□□□ -1.58
CLK3-219ENST00000567805 TMEM105Q8N8V8 129 aa5.17□□□□□ -1.58
CLK3-219ENST00000567805 FLCNQ8NFG4 579 aa5.17□□□□□ -1.58
CLK3-219ENST00000567805 CACTINQ8WUQ7 758 aaKnown RBP5.17□□□□□ -1.58
CLK3-219ENST00000567805 ING5Q8WYH8 240 aa5.17□□□□□ -1.58
CLK3-219ENST00000567805 DHX58Q96C10 678 aa5.17□□□□□ -1.58
CLK3-219ENST00000567805 SAAL1Q96ER3 474 aa5.17□□□□□ -1.58
CLK3-219ENST00000567805 ZNF512Q96ME7 567 aaPredicted RBP5.17□□□□□ -1.58
CLK3-219ENST00000567805 ZNF560Q96MR9 790 aa5.17□□□□□ -1.58
CLK3-219ENST00000567805 C7orf25Q9BPX7 421 aa5.17□□□□□ -1.58
CLK3-219ENST00000567805 RTP3Q9BQQ7 232 aa5.17□□□□□ -1.58
CLK3-219ENST00000567805 CBWD1Q9BRT8 395 aa5.17□□□□□ -1.58
CLK3-219ENST00000567805 FGFBP2Q9BYJ0 223 aa5.17□□□□□ -1.58
CLK3-219ENST00000567805 ARHGEF3Q9NR81 526 aa5.17□□□□□ -1.58
CLK3-219ENST00000567805 FAM13BQ9NYF5 915 aa5.17□□□□□ -1.58
CLK3-219ENST00000567805 RBAKQ9NYW8 714 aaPredicted RBP5.17□□□□□ -1.58
CLK3-219ENST00000567805 HSFX1Q9UBD0 423 aa5.17□□□□□ -1.58
CLK3-219ENST00000567805 PCDHA7Q9UN72 937 aa5.17□□□□□ -1.58
CLK3-219ENST00000567805 MRPS23Q9Y3D9 190 aaKnown RBP5.17□□□□□ -1.58
CLK3-219ENST00000567805 TIMM13Q9Y5L4 95 aaPredicted RBP5.17□□□□□ -1.58
CLK3-219ENST00000567805 ZDBF2Q9HCK1 2354 aa5.17□□□□□ -1.58
CLK3-219ENST00000567805 KIF26AQ9ULI4 1882 aaPredicted RBP5.17□□□□□ -1.58
CLK3-219ENST00000567805 UBE4BO95155 1302 aa5.17□□□□□ -1.58
CLK3-219ENST00000567805 FANCMQ8IYD8 2048 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 PVALEFA0A1B0GWK0 134 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 MTMR11A4FU01 709 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 ZNF233A6NK53 670 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 KPNA7A9QM74 516 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 ECI2O75521 394 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 PRPF6O94906 941 aaKnown RBP5.16□□□□□ -1.58
CLK3-219ENST00000567805 VNN2O95498 520 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 FGF19O95750 216 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 ITGB3P05106 788 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 OR4Q2P0C623 313 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 CEBPBP17676 345 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 RFX1P22670 979 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 HOXD13P35453 343 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 CCR2P41597 374 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 MLLT3P42568 568 aaPredicted RBP5.16□□□□□ -1.58
CLK3-219ENST00000567805 ALDH1A3P47895 512 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 MRE11P49959 708 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 EPHB3P54753 998 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 EPHA5P54756 1037 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 STARD6P59095 220 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 SNRPFP62306 86 aaKnown RBP5.16□□□□□ -1.58
CLK3-219ENST00000567805 GPC5P78333 572 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 TFAMQ00059 246 aaKnown RBP5.16□□□□□ -1.58
CLK3-219ENST00000567805 PFKPQ01813 784 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 DNM1Q05193 864 aaKnown RBP5.16□□□□□ -1.58
CLK3-219ENST00000567805 EHHADHQ08426 723 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 SURF1Q15526 300 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 SLC39A12Q504Y0 691 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 FAM26FQ5R3K3 315 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 CENPPQ6IPU0 288 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 UNC13DQ70J99 1090 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 EPM2AIP1Q7L775 607 aaPredicted RBP5.16□□□□□ -1.58
CLK3-219ENST00000567805 ALYREFQ86V81 257 aaKnown RBP5.16□□□□□ -1.58
CLK3-219ENST00000567805 CEP57L1Q8IYX8 460 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 THEM5Q8N1Q8 247 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 TMEM86AQ8N2M4 240 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 LRRC52Q8N7C0 313 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 C1orf127Q8N9H9 656 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 GLIS3Q8NEA6 775 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 ZSWIM2Q8NEG5 633 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 OR10T2Q8NGX3 314 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 ZNF507Q8TCN5 953 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 GPR152Q8TDT2 470 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 C2orf15Q8WU43 125 aaKnown RBP5.16□□□□□ -1.58
CLK3-219ENST00000567805 HPS3Q969F9 1004 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 ELSPBP1Q96BH3 223 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 TCEAL4Q96EI5 215 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 MCRS1Q96EZ8 462 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 BORCS6Q96GS4 357 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 SHDQ96IW2 340 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 ANKRD36BP1Q96IX9 119 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 ASB16Q96NS5 453 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 PGLYRP2Q96PD5 576 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 KXD1Q9BQD3 176 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 RPP25Q9BUL9 199 aaKnown RBP5.16□□□□□ -1.58
CLK3-219ENST00000567805 GPR88Q9GZN0 384 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 ZCWPW1Q9H0M4 648 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 DNAJC25Q9H1X3 360 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 CRISPLD1Q9H336 500 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 PCIF1Q9H4Z3 704 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 TBC1D17Q9HA65 648 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 KIAA1586Q9HCI6 787 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 ASAH2Q9NR71 780 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 HSPBP1Q9NZL4 362 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 CEP72Q9P209 647 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 CGNQ9P2M7 1197 aaKnown RBP5.16□□□□□ -1.58
CLK3-219ENST00000567805 RCOR1Q9UKL0 485 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 ITGA11Q9UKX5 1188 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 CA14Q9ULX7 337 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 YIPF1Q9Y548 306 aa5.16□□□□□ -1.58
CLK3-219ENST00000567805 ASB3Q9Y575 518 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms