RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 ASB3Q9Y575 518 aa15.09■□□□□ 0.01
SMG1-213ENST00000567737 KIF26AQ9ULI4 1882 aaPredicted RBP15.09■□□□□ 0.01
SMG1-213ENST00000567737 BPTFQ12830 3046 aa15.09■□□□□ 0.01
SMG1-213ENST00000567737 PCNX2A6NKB5 2137 aa15.08■□□□□ 0.01
SMG1-213ENST00000567737 NUP210Q8TEM1 1887 aaPredicted RBP15.08■□□□□ 0.01
SMG1-213ENST00000567737 THADAQ6YHU6 1953 aa15.08■□□□□ 0
SMG1-213ENST00000567737 TK2O00142 265 aa15.08■□□□□ 0
SMG1-213ENST00000567737 ACKR2O00590 384 aa15.08■□□□□ 0
SMG1-213ENST00000567737 TNFRSF10BO14763 440 aa15.08■□□□□ 0
SMG1-213ENST00000567737 USO1O60763 962 aaKnown RBP15.08■□□□□ 0
SMG1-213ENST00000567737 SLITRK3O94933 977 aa15.08■□□□□ 0
SMG1-213ENST00000567737 CFIP05156 583 aa15.08■□□□□ 0
SMG1-213ENST00000567737 PLA2G2AP14555 144 aa15.08■□□□□ 0
SMG1-213ENST00000567737 RARRES1P49788 294 aa15.08■□□□□ 0
SMG1-213ENST00000567737 EEF1DP3Q658K8 133 aa15.08■□□□□ 0
SMG1-213ENST00000567737 TRIM68Q6AZZ1 485 aa15.08■□□□□ 0
SMG1-213ENST00000567737 ARMCX6Q7L4S7 300 aa15.08■□□□□ 0
SMG1-213ENST00000567737 MAEAQ7L5Y9 396 aa15.08■□□□□ 0
SMG1-213ENST00000567737 APBB1IPQ7Z5R6 666 aaPredicted RBP15.08■□□□□ 0
SMG1-213ENST00000567737 RASSF3Q86WH2 238 aa15.08■□□□□ 0
SMG1-213ENST00000567737 BEST2Q8NFU1 509 aa15.08■□□□□ 0
SMG1-213ENST00000567737 CCDC26Q8TAB7 109 aa15.08■□□□□ 0
SMG1-213ENST00000567737 PSMG2Q969U7 264 aa15.08■□□□□ 0
SMG1-213ENST00000567737 SUSD3Q96L08 255 aa15.08■□□□□ 0
SMG1-213ENST00000567737 CNOT6LQ96LI5 555 aaKnown RBP15.08■□□□□ 0
SMG1-213ENST00000567737 GCNAQ96QF7 691 aa15.08■□□□□ 0
SMG1-213ENST00000567737 POLR3CQ9BUI4 534 aaPredicted RBP15.08■□□□□ 0
SMG1-213ENST00000567737 GPRC5CQ9NQ84 441 aa15.08■□□□□ 0
SMG1-213ENST00000567737 ANO2Q9NQ90 1003 aa15.08■□□□□ 0
SMG1-213ENST00000567737 TOPORSQ9NS56 1045 aaPredicted RBP15.08■□□□□ 0
SMG1-213ENST00000567737 MBD1Q9UIS9 605 aaPredicted RBP15.08■□□□□ 0
SMG1-213ENST00000567737 USP20Q9Y2K6 914 aa15.08■□□□□ 0
SMG1-213ENST00000567737 ABCA7Q8IZY2 2146 aa15.07■□□□□ 0
SMG1-213ENST00000567737 OTOL1A6NHN0 477 aaPredicted RBP15.07■□□□□ 0
SMG1-213ENST00000567737 LYPLA2O95372 231 aa15.07■□□□□ 0
SMG1-213ENST00000567737 GCFC2P16383 781 aaKnown RBP15.07■□□□□ 0
SMG1-213ENST00000567737 U2AF2P26368 475 aaKnown RBP eCLIP15.07■□□□□ 0
SMG1-213ENST00000567737 MARCKSP29966 332 aaPredicted RBP15.07■□□□□ 0
SMG1-213ENST00000567737 CYP4F8P98187 520 aa15.07■□□□□ 0
SMG1-213ENST00000567737 DUSP4Q13115 394 aa15.07■□□□□ 0
SMG1-213ENST00000567737 TRIP6Q15654 476 aaKnown RBP15.07■□□□□ 0
SMG1-213ENST00000567737 LMBRD2Q68DH5 695 aaPredicted RBP15.07■□□□□ 0
SMG1-213ENST00000567737 KRT25Q7Z3Z0 450 aa15.07■□□□□ 0
SMG1-213ENST00000567737 DNAJB7Q7Z6W7 309 aaPredicted RBP15.07■□□□□ 0
SMG1-213ENST00000567737 ZNF605Q86T29 641 aa15.07■□□□□ 0
SMG1-213ENST00000567737 ITIH5Q86UX2 942 aa15.07■□□□□ 0
SMG1-213ENST00000567737 SPACA7Q96KW9 195 aa15.07■□□□□ 0
SMG1-213ENST00000567737 SMG9Q9H0W8 520 aaKnown RBP15.07■□□□□ 0
SMG1-213ENST00000567737 TMEM74BQ9NUR3 256 aa15.07■□□□□ 0
SMG1-213ENST00000567737 PCDHB9Q9Y5E1 797 aa15.07■□□□□ 0
SMG1-213ENST00000567737 CACNA1EQ15878 2313 aa15.07■□□□□ 0
SMG1-213ENST00000567737 ATG2BQ96BY7 2078 aa15.07■□□□□ 0
SMG1-213ENST00000567737 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.06■□□□□ 0
SMG1-213ENST00000567737 M0R2N6 131 aa15.06■□□□□ 0
SMG1-213ENST00000567737 SNPHO15079 494 aa15.06■□□□□ 0
SMG1-213ENST00000567737 OR4Q2P0C623 313 aa15.06■□□□□ 0
SMG1-213ENST00000567737 RPL9P32969 192 aaKnown RBP15.06■□□□□ 0
SMG1-213ENST00000567737 GFPT1Q06210 699 aaPredicted RBP15.06■□□□□ 0
SMG1-213ENST00000567737 LYSMD4Q5XG99 296 aa15.06■□□□□ 0
SMG1-213ENST00000567737 CC2D1AQ6P1N0 951 aaPredicted RBP15.06■□□□□ 0
SMG1-213ENST00000567737 TTC30AQ86WT1 665 aa15.06■□□□□ 0
SMG1-213ENST00000567737 TMEFF1Q8IYR6 380 aa15.06■□□□□ 0
SMG1-213ENST00000567737 DEPTORQ8TB45 409 aa15.06■□□□□ 0
SMG1-213ENST00000567737 HAS1Q92839 578 aa15.06■□□□□ 0
SMG1-213ENST00000567737 CD101Q93033 1021 aa15.06■□□□□ 0
SMG1-213ENST00000567737 TBC1D32Q96NH3 1257 aa15.06■□□□□ 0
SMG1-213ENST00000567737 EIF2AK1Q9BQI3 630 aaKnown RBP15.06■□□□□ 0
SMG1-213ENST00000567737 CCDC94Q9BW85 323 aaPredicted RBP15.06■□□□□ 0
SMG1-213ENST00000567737 OXCT2Q9BYC2 517 aaPredicted RBP15.06■□□□□ 0
SMG1-213ENST00000567737 CRISPLD1Q9H336 500 aa15.06■□□□□ 0
SMG1-213ENST00000567737 SLC6A14Q9UN76 642 aa15.06■□□□□ 0
SMG1-213ENST00000567737 ATXN2Q99700 1313 aaKnown RBP15.06■□□□□ 0
SMG1-213ENST00000567737 NID2Q14112 1375 aa15.06■□□□□ 0
SMG1-213ENST00000567737 C1QL1O75973 258 aa15.05■□□□□ -0
SMG1-213ENST00000567737 VNN2O95498 520 aa15.05■□□□□ -0
SMG1-213ENST00000567737 FTH1P19P0C7X4 201 aa15.05■□□□□ -0
SMG1-213ENST00000567737 ARSAP15289 507 aa15.05■□□□□ -0
SMG1-213ENST00000567737 CDC25CP30307 473 aa15.05■□□□□ -0
SMG1-213ENST00000567737 PTGER3P43115 390 aa15.05■□□□□ -0
SMG1-213ENST00000567737 YWHAHQ04917 246 aaPredicted RBP15.05■□□□□ -0
SMG1-213ENST00000567737 BFSP1Q12934 665 aa15.05■□□□□ -0
SMG1-213ENST00000567737 NTRK3Q16288 839 aa15.05■□□□□ -0
SMG1-213ENST00000567737 DUOXA1Q1HG43 343 aa15.05■□□□□ -0
SMG1-213ENST00000567737 NEK8Q86SG6 692 aa15.05■□□□□ -0
SMG1-213ENST00000567737 MINDY1Q8N5J2 469 aa15.05■□□□□ -0
SMG1-213ENST00000567737 PNPLA1Q8N8W4 532 aa15.05■□□□□ -0
SMG1-213ENST00000567737 DAGLBQ8NCG7 672 aa15.05■□□□□ -0
SMG1-213ENST00000567737 MCPH1Q8NEM0 835 aa15.05■□□□□ -0
SMG1-213ENST00000567737 MDGA1Q8NFP4 955 aa15.05■□□□□ -0
SMG1-213ENST00000567737 CEP76Q8TAP6 659 aa15.05■□□□□ -0
SMG1-213ENST00000567737 FSCN3Q9NQT6 498 aa15.05■□□□□ -0
SMG1-213ENST00000567737 ZMYM5Q9UJ78 669 aa15.05■□□□□ -0
SMG1-213ENST00000567737 TBX20Q9UMR3 447 aa15.05■□□□□ -0
SMG1-213ENST00000567737 RAI2Q9Y5P3 530 aa15.05■□□□□ -0
SMG1-213ENST00000567737 CCNT1O60563 726 aaKnown RBP15.04■□□□□ -0
SMG1-213ENST00000567737 ALDH1A2O94788 518 aa15.04■□□□□ -0
SMG1-213ENST00000567737 BAG4O95429 457 aaKnown RBP15.04■□□□□ -0
SMG1-213ENST00000567737 HMGB1P09429 215 aaKnown RBP15.04■□□□□ -0
SMG1-213ENST00000567737 IFNAR1P17181 557 aa15.04■□□□□ -0
SMG1-213ENST00000567737 GJA4P35212 333 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms