RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 SYCP3Q8IZU3 236 aa20.1■□□□□ 0.81
LINC01238-205ENST00000567549 SHKBP1Q8TBC3 707 aa20.1■□□□□ 0.81
LINC01238-205ENST00000567549 EPSTI1Q96J88 318 aa20.1■□□□□ 0.81
LINC01238-205ENST00000567549 FIZ1Q96SL8 496 aa20.1■□□□□ 0.81
LINC01238-205ENST00000567549 PYM1Q9BRP8 204 aaKnown RBP20.1■□□□□ 0.81
LINC01238-205ENST00000567549 TMEM206Q9H813 350 aa20.1■□□□□ 0.81
LINC01238-205ENST00000567549 OLFML3Q9NRN5 406 aa20.1■□□□□ 0.81
LINC01238-205ENST00000567549 THG1LQ9NWX6 298 aaKnown RBP20.1■□□□□ 0.81
LINC01238-205ENST00000567549 NCDNQ9UBB6 729 aa20.1■□□□□ 0.81
LINC01238-205ENST00000567549 HEPACAM2A8MVW5 462 aa20.09■□□□□ 0.81
LINC01238-205ENST00000567549 LRRN2O75325 713 aa20.09■□□□□ 0.81
LINC01238-205ENST00000567549 OR4Q2P0C623 313 aa20.09■□□□□ 0.81
LINC01238-205ENST00000567549 PDIA4P13667 645 aaKnown RBP20.09■□□□□ 0.81
LINC01238-205ENST00000567549 STAT6P42226 847 aa20.09■□□□□ 0.81
LINC01238-205ENST00000567549 KPNA1P52294 538 aaPredicted RBP20.09■□□□□ 0.81
LINC01238-205ENST00000567549 MGAT5BQ3V5L5 792 aa20.09■□□□□ 0.81
LINC01238-205ENST00000567549 SLC39A12Q504Y0 691 aa20.09■□□□□ 0.81
LINC01238-205ENST00000567549 ARHGAP29Q52LW3 1261 aa20.09■□□□□ 0.81
LINC01238-205ENST00000567549 ZC2HC1CQ53FD0 456 aaPredicted RBP20.09■□□□□ 0.81
LINC01238-205ENST00000567549 L1TD1Q5T7N2 865 aaKnown RBP20.09■□□□□ 0.81
LINC01238-205ENST00000567549 SLC39A4Q6P5W5 647 aa20.09■□□□□ 0.81
LINC01238-205ENST00000567549 DNAJB7Q7Z6W7 309 aaPredicted RBP20.09■□□□□ 0.81
LINC01238-205ENST00000567549 SEPT5Q99719 369 aaPredicted RBP20.09■□□□□ 0.81
LINC01238-205ENST00000567549 CHRDQ9H2X0 955 aa20.09■□□□□ 0.81
LINC01238-205ENST00000567549 ATXN3LQ9H3M9 355 aa20.09■□□□□ 0.81
LINC01238-205ENST00000567549 RAB23Q9ULC3 237 aa20.09■□□□□ 0.81
LINC01238-205ENST00000567549 NDRG2Q9UN36 371 aaKnown RBP20.09■□□□□ 0.81
LINC01238-205ENST00000567549 MTF2Q9Y483 593 aaPredicted RBP20.09■□□□□ 0.81
LINC01238-205ENST00000567549 VPS13AQ96RL7 3174 aa20.08■□□□□ 0.81
LINC01238-205ENST00000567549 KPNA7A9QM74 516 aa20.08■□□□□ 0.81
LINC01238-205ENST00000567549 ANKRD63C9JTQ0 380 aa20.08■□□□□ 0.81
LINC01238-205ENST00000567549 GCNT3O95395 438 aa20.08■□□□□ 0.81
LINC01238-205ENST00000567549 GARTP22102 1010 aa20.08■□□□□ 0.81
LINC01238-205ENST00000567549 WEE1P30291 646 aa20.08■□□□□ 0.81
LINC01238-205ENST00000567549 GUCY2FP51841 1108 aa20.08■□□□□ 0.81
LINC01238-205ENST00000567549 GRIN1Q05586 938 aa20.08■□□□□ 0.81
LINC01238-205ENST00000567549 FCHO2Q0JRZ9 810 aa20.08■□□□□ 0.81
LINC01238-205ENST00000567549 NFE2Q16621 373 aaPredicted RBP20.08■□□□□ 0.81
LINC01238-205ENST00000567549 ATAD1Q8NBU5 361 aa20.08■□□□□ 0.81
LINC01238-205ENST00000567549 SPATA18Q8TC71 538 aa20.08■□□□□ 0.81
LINC01238-205ENST00000567549 ZCWPW1Q9H0M4 648 aa20.08■□□□□ 0.81
LINC01238-205ENST00000567549 PRMT8Q9NR22 394 aaPredicted RBP20.08■□□□□ 0.81
LINC01238-205ENST00000567549 FBXO2Q9UK22 296 aaPredicted RBP20.08■□□□□ 0.81
LINC01238-205ENST00000567549 SLC27A5Q9Y2P5 690 aa20.08■□□□□ 0.81
LINC01238-205ENST00000567549 CLIC4Q9Y696 253 aa20.08■□□□□ 0.81
LINC01238-205ENST00000567549 GVINP1Q7Z2Y8 2422 aa20.07■□□□□ 0.8
LINC01238-205ENST00000567549 ANK1P16157 1881 aa20.07■□□□□ 0.8
LINC01238-205ENST00000567549 SOBPA7XYQ1 873 aa20.07■□□□□ 0.8
LINC01238-205ENST00000567549 HUS1O60921 280 aa20.07■□□□□ 0.8
LINC01238-205ENST00000567549 MOSPD3O75425 235 aa20.07■□□□□ 0.8
LINC01238-205ENST00000567549 IDEP14735 1019 aa20.07■□□□□ 0.8
LINC01238-205ENST00000567549 SYT1P21579 422 aa20.07■□□□□ 0.8
LINC01238-205ENST00000567549 DDX6P26196 483 aaKnown RBP eCLIP20.07■□□□□ 0.8
LINC01238-205ENST00000567549 GABRR2P28476 465 aa20.07■□□□□ 0.8
LINC01238-205ENST00000567549 VIPR2P41587 438 aa20.07■□□□□ 0.8
LINC01238-205ENST00000567549 RALGPS2Q86X27 583 aaPredicted RBP20.07■□□□□ 0.8
LINC01238-205ENST00000567549 TMC8Q8IU68 726 aa20.07■□□□□ 0.8
LINC01238-205ENST00000567549 ARID3BQ8IVW6 561 aaPredicted RBP20.07■□□□□ 0.8
LINC01238-205ENST00000567549 CCDC65Q8IXS2 484 aa20.07■□□□□ 0.8
LINC01238-205ENST00000567549 MAML2Q8IZL2 1156 aaPredicted RBP20.07■□□□□ 0.8
LINC01238-205ENST00000567549 ZBTB44Q8NCP5 570 aa20.07■□□□□ 0.8
LINC01238-205ENST00000567549 EXOC4Q96A65 974 aa20.07■□□□□ 0.8
LINC01238-205ENST00000567549 ZSWIM3Q96MP5 696 aa20.07■□□□□ 0.8
LINC01238-205ENST00000567549 PCDHB5Q9Y5E4 795 aa20.07■□□□□ 0.8
LINC01238-205ENST00000567549 TICRRQ7Z2Z1 1910 aa20.07■□□□□ 0.8
LINC01238-205ENST00000567549 F5P12259 2224 aa20.07■□□□□ 0.8
LINC01238-205ENST00000567549 NUP210Q8TEM1 1887 aaPredicted RBP20.07■□□□□ 0.8
LINC01238-205ENST00000567549 PPP1R37O75864 691 aa20.06■□□□□ 0.8
LINC01238-205ENST00000567549 GJA1P17302 382 aa20.06■□□□□ 0.8
LINC01238-205ENST00000567549 AMPD3Q01432 767 aa20.06■□□□□ 0.8
LINC01238-205ENST00000567549 AMPD2Q01433 879 aa20.06■□□□□ 0.8
LINC01238-205ENST00000567549 SURF1Q15526 300 aa20.06■□□□□ 0.8
LINC01238-205ENST00000567549 DGKKQ5KSL6 1271 aa20.06■□□□□ 0.8
LINC01238-205ENST00000567549 GPR158Q5T848 1215 aa20.06■□□□□ 0.8
LINC01238-205ENST00000567549 TMEM86AQ8N2M4 240 aa20.06■□□□□ 0.8
LINC01238-205ENST00000567549 LRRC15Q8TF66 581 aa20.06■□□□□ 0.8
LINC01238-205ENST00000567549 LRRC3Q9BY71 257 aa20.06■□□□□ 0.8
LINC01238-205ENST00000567549 DNAJC25Q9H1X3 360 aa20.06■□□□□ 0.8
LINC01238-205ENST00000567549 CUEDC2Q9H467 287 aa20.06■□□□□ 0.8
LINC01238-205ENST00000567549 TASP1Q9H6P5 420 aa20.06■□□□□ 0.8
LINC01238-205ENST00000567549 UXTQ9UBK9 157 aaPredicted RBP20.06■□□□□ 0.8
LINC01238-205ENST00000567549 GMEB2Q9UKD1 530 aa20.06■□□□□ 0.8
LINC01238-205ENST00000567549 ITGA11Q9UKX5 1188 aa20.06■□□□□ 0.8
LINC01238-205ENST00000567549 TSC2P49815 1807 aa20.05■□□□□ 0.8
LINC01238-205ENST00000567549 TULP1O00294 542 aaPredicted RBP20.05■□□□□ 0.8
LINC01238-205ENST00000567549 PPEF2O14830 753 aa20.05■□□□□ 0.8
LINC01238-205ENST00000567549 TFAMQ00059 246 aaKnown RBP20.05■□□□□ 0.8
LINC01238-205ENST00000567549 MYL7Q01449 175 aa20.05■□□□□ 0.8
LINC01238-205ENST00000567549 MTAPQ13126 283 aa20.05■□□□□ 0.8
LINC01238-205ENST00000567549 SLC39A14Q15043 492 aa20.05■□□□□ 0.8
LINC01238-205ENST00000567549 BRSK2Q8IWQ3 736 aa20.05■□□□□ 0.8
LINC01238-205ENST00000567549 KIAA2013Q8IYS2 634 aa20.05■□□□□ 0.8
LINC01238-205ENST00000567549 LRRC52Q8N7C0 313 aa20.05■□□□□ 0.8
LINC01238-205ENST00000567549 SUMF1Q8NBK3 374 aa20.05■□□□□ 0.8
LINC01238-205ENST00000567549 FAM213AQ9BRX8 229 aa20.05■□□□□ 0.8
LINC01238-205ENST00000567549 EPC1Q9H2F5 836 aa20.05■□□□□ 0.8
LINC01238-205ENST00000567549 LMAN1LQ9HAT1 526 aa20.05■□□□□ 0.8
LINC01238-205ENST00000567549 PANK4Q9NVE7 773 aa20.05■□□□□ 0.8
LINC01238-205ENST00000567549 RBAKQ9NYW8 714 aaPredicted RBP20.05■□□□□ 0.8
LINC01238-205ENST00000567549 EP300Q09472 2414 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms