RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 ZSCAN18Q8TBC5 510 aaPredicted RBP15.38■□□□□ 0.05
COMMD4-216ENST00000567023 C2orf15Q8WU43 125 aaKnown RBP15.38■□□□□ 0.05
COMMD4-216ENST00000567023 DEPDC1BQ8WUY9 529 aa15.38■□□□□ 0.05
COMMD4-216ENST00000567023 IRF7Q92985 503 aa15.38■□□□□ 0.05
COMMD4-216ENST00000567023 E2F7Q96AV8 911 aa15.38■□□□□ 0.05
COMMD4-216ENST00000567023 CLDN23Q96B33 292 aa15.38■□□□□ 0.05
COMMD4-216ENST00000567023 PYM1Q9BRP8 204 aaKnown RBP15.38■□□□□ 0.05
COMMD4-216ENST00000567023 FGFBP2Q9BYJ0 223 aa15.38■□□□□ 0.05
COMMD4-216ENST00000567023 BCO2Q9BYV7 579 aa15.38■□□□□ 0.05
COMMD4-216ENST00000567023 LTB4R2Q9NPC1 389 aa15.38■□□□□ 0.05
COMMD4-216ENST00000567023 TFIP11Q9UBB9 837 aaKnown RBP15.38■□□□□ 0.05
COMMD4-216ENST00000567023 MTF2Q9Y483 593 aaPredicted RBP15.38■□□□□ 0.05
COMMD4-216ENST00000567023 RIF1Q5UIP0 2472 aaKnown RBP15.38■□□□□ 0.05
COMMD4-216ENST00000567023 TSC2P49815 1807 aa15.38■□□□□ 0.05
COMMD4-216ENST00000567023 PTPRZ1P23471 2315 aaPredicted RBP15.38■□□□□ 0.05
COMMD4-216ENST00000567023 A0A1W2PRU2 124 aa15.37■□□□□ 0.05
COMMD4-216ENST00000567023 KIAA0391O15091 583 aaKnown RBP15.37■□□□□ 0.05
COMMD4-216ENST00000567023 EXTL3O43909 919 aa15.37■□□□□ 0.05
COMMD4-216ENST00000567023 CUTAO60888 179 aa15.37■□□□□ 0.05
COMMD4-216ENST00000567023 LRRN2O75325 713 aa15.37■□□□□ 0.05
COMMD4-216ENST00000567023 FGF19O95750 216 aa15.37■□□□□ 0.05
COMMD4-216ENST00000567023 GJA1P17302 382 aa15.37■□□□□ 0.05
COMMD4-216ENST00000567023 AMPD3Q01432 767 aa15.37■□□□□ 0.05
COMMD4-216ENST00000567023 SLC39A12Q504Y0 691 aa15.37■□□□□ 0.05
COMMD4-216ENST00000567023 WSCD1Q658N2 575 aa15.37■□□□□ 0.05
COMMD4-216ENST00000567023 ZNF852Q6ZMS4 543 aa15.37■□□□□ 0.05
COMMD4-216ENST00000567023 TPRG1Q6ZUI0 275 aa15.37■□□□□ 0.05
COMMD4-216ENST00000567023 GAREM2Q75VX8 874 aa15.37■□□□□ 0.05
COMMD4-216ENST00000567023 ITIH5Q86UX2 942 aa15.37■□□□□ 0.05
COMMD4-216ENST00000567023 MFSD6LQ8IWD5 586 aa15.37■□□□□ 0.05
COMMD4-216ENST00000567023 MAML2Q8IZL2 1156 aaPredicted RBP15.37■□□□□ 0.05
COMMD4-216ENST00000567023 TTC9BQ8N6N2 239 aa15.37■□□□□ 0.05
COMMD4-216ENST00000567023 CACTINQ8WUQ7 758 aaKnown RBP15.37■□□□□ 0.05
COMMD4-216ENST00000567023 SAAL1Q96ER3 474 aa15.37■□□□□ 0.05
COMMD4-216ENST00000567023 ZNF560Q96MR9 790 aa15.37■□□□□ 0.05
COMMD4-216ENST00000567023 CBWD1Q9BRT8 395 aa15.37■□□□□ 0.05
COMMD4-216ENST00000567023 TRIM9Q9C026 710 aa15.37■□□□□ 0.05
COMMD4-216ENST00000567023 BRD9Q9H8M2 597 aa15.37■□□□□ 0.05
COMMD4-216ENST00000567023 ZNF334Q9HCZ1 680 aaPredicted RBP15.37■□□□□ 0.05
COMMD4-216ENST00000567023 HEBP1Q9NRV9 189 aa15.37■□□□□ 0.05
COMMD4-216ENST00000567023 RBAKQ9NYW8 714 aaPredicted RBP15.37■□□□□ 0.05
COMMD4-216ENST00000567023 CACNA1IQ9P0X4 2223 aa15.37■□□□□ 0.05
COMMD4-216ENST00000567023 DCHS1Q96JQ0 3298 aa15.37■□□□□ 0.05
COMMD4-216ENST00000567023 COL4A3Q01955 1670 aa15.36■□□□□ 0.05
COMMD4-216ENST00000567023 NCAM2O15394 837 aa15.36■□□□□ 0.05
COMMD4-216ENST00000567023 PRPF6O94906 941 aaKnown RBP15.36■□□□□ 0.05
COMMD4-216ENST00000567023 SP9P0CG40 484 aa15.36■□□□□ 0.05
COMMD4-216ENST00000567023 CD72P21854 359 aa15.36■□□□□ 0.05
COMMD4-216ENST00000567023 WEE1P30291 646 aa15.36■□□□□ 0.05
COMMD4-216ENST00000567023 RPS9P46781 194 aaKnown RBP15.36■□□□□ 0.05
COMMD4-216ENST00000567023 MLLT6P55198 1093 aaPredicted RBP15.36■□□□□ 0.05
COMMD4-216ENST00000567023 TFAMQ00059 246 aaKnown RBP15.36■□□□□ 0.05
COMMD4-216ENST00000567023 FZD5Q13467 585 aa15.36■□□□□ 0.05
COMMD4-216ENST00000567023 GRM2Q14416 872 aa15.36■□□□□ 0.05
COMMD4-216ENST00000567023 UBXN2BQ14CS0 331 aa15.36■□□□□ 0.05
COMMD4-216ENST00000567023 SHC4Q6S5L8 630 aa15.36■□□□□ 0.05
COMMD4-216ENST00000567023 STXBP4Q6ZWJ1 553 aa15.36■□□□□ 0.05
COMMD4-216ENST00000567023 LRRTM3Q86VH5 581 aa15.36■□□□□ 0.05
COMMD4-216ENST00000567023 ZNF687Q8N1G0 1237 aa15.36■□□□□ 0.05
COMMD4-216ENST00000567023 LRRC52Q8N7C0 313 aa15.36■□□□□ 0.05
COMMD4-216ENST00000567023 C1orf127Q8N9H9 656 aa15.36■□□□□ 0.05
COMMD4-216ENST00000567023 IQUBQ8NA54 791 aa15.36■□□□□ 0.05
COMMD4-216ENST00000567023 SPPL2BQ8TCT7 592 aa15.36■□□□□ 0.05
COMMD4-216ENST00000567023 MKNK1Q9BUB5 465 aa15.36■□□□□ 0.05
COMMD4-216ENST00000567023 FBXO4Q9UKT5 387 aa15.36■□□□□ 0.05
COMMD4-216ENST00000567023 ITGA11Q9UKX5 1188 aa15.36■□□□□ 0.05
COMMD4-216ENST00000567023 MRPS17Q9Y2R5 130 aaKnown RBP15.36■□□□□ 0.05
COMMD4-216ENST00000567023 MIA3Q5JRA6 1907 aa15.36■□□□□ 0.05
COMMD4-216ENST00000567023 FAM186AA6NE01 2351 aa15.35■□□□□ 0.05
COMMD4-216ENST00000567023 HEPACAM2A8MVW5 462 aa15.35■□□□□ 0.05
COMMD4-216ENST00000567023 ARNTLO00327 626 aa15.35■□□□□ 0.05
COMMD4-216ENST00000567023 MAN2B1O00754 1011 aa15.35■□□□□ 0.05
COMMD4-216ENST00000567023 ITGB3P05106 788 aa15.35■□□□□ 0.05
COMMD4-216ENST00000567023 ATF6P18850 670 aa15.35■□□□□ 0.05
COMMD4-216ENST00000567023 TARSP26639 723 aaKnown RBP15.35■□□□□ 0.05
COMMD4-216ENST00000567023 POLR2BP30876 1174 aaKnown RBP15.35■□□□□ 0.05
COMMD4-216ENST00000567023 GDI1P31150 447 aa15.35■□□□□ 0.05
COMMD4-216ENST00000567023 HOXD13P35453 343 aa15.35■□□□□ 0.05
COMMD4-216ENST00000567023 VIPR2P41587 438 aa15.35■□□□□ 0.05
COMMD4-216ENST00000567023 FCHO2Q0JRZ9 810 aa15.35■□□□□ 0.05
COMMD4-216ENST00000567023 ZNF528Q3MIS6 628 aa15.35■□□□□ 0.05
COMMD4-216ENST00000567023 ATL3Q6DD88 541 aa15.35■□□□□ 0.05
COMMD4-216ENST00000567023 ZC3H14Q6PJT7 736 aaKnown RBP15.35■□□□□ 0.05
COMMD4-216ENST00000567023 EPM2AIP1Q7L775 607 aaPredicted RBP15.35■□□□□ 0.05
COMMD4-216ENST00000567023 GPD1LQ8N335 351 aa15.35■□□□□ 0.05
COMMD4-216ENST00000567023 SPATA18Q8TC71 538 aa15.35■□□□□ 0.05
COMMD4-216ENST00000567023 ZNF507Q8TCN5 953 aa15.35■□□□□ 0.05
COMMD4-216ENST00000567023 C7orf25Q9BPX7 421 aa15.35■□□□□ 0.05
COMMD4-216ENST00000567023 GDAP2Q9NXN4 497 aa15.35■□□□□ 0.05
COMMD4-216ENST00000567023 AGAP1Q9UPQ3 857 aa15.35■□□□□ 0.05
COMMD4-216ENST00000567023 NCANO14594 1321 aa15.35■□□□□ 0.05
COMMD4-216ENST00000567023 F5P12259 2224 aa15.34■□□□□ 0.05
COMMD4-216ENST00000567023 GOLGA8IPA6NC78 632 aa15.34■□□□□ 0.05
COMMD4-216ENST00000567023 GOLGA8JA6NMD2 632 aa15.34■□□□□ 0.05
COMMD4-216ENST00000567023 ZNF263O14978 683 aa15.34■□□□□ 0.05
COMMD4-216ENST00000567023 EIF3DO15371 548 aaKnown RBP eCLIP15.34■□□□□ 0.05
COMMD4-216ENST00000567023 SOAT2O75908 522 aa15.34■□□□□ 0.05
COMMD4-216ENST00000567023 ZSCAN22P10073 491 aaPredicted RBP15.34■□□□□ 0.05
COMMD4-216ENST00000567023 GABRR2P28476 465 aa15.34■□□□□ 0.05
COMMD4-216ENST00000567023 MGAT5BQ3V5L5 792 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms