RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 NIM1KQ8IY84 436 aa5.49□□□□□ -1.53
CHD9-214ENST00000565119 ZNF480Q8WV37 535 aa5.49□□□□□ -1.53
CHD9-214ENST00000565119 CHMP4CQ96CF2 233 aa5.49□□□□□ -1.53
CHD9-214ENST00000565119 BHMT2Q9H2M3 363 aa5.49□□□□□ -1.53
CHD9-214ENST00000565119 OBP2AQ9NY56 170 aa5.49□□□□□ -1.53
CHD9-214ENST00000565119 MTO1Q9Y2Z2 717 aaKnown RBP5.49□□□□□ -1.53
CHD9-214ENST00000565119 ATRNL1Q5VV63 1379 aa5.49□□□□□ -1.53
CHD9-214ENST00000565119 CCDC151A5D8V7 595 aa5.48□□□□□ -1.53
CHD9-214ENST00000565119 LINC01548A6NM66 108 aa5.48□□□□□ -1.53
CHD9-214ENST00000565119 H3BNC9 293 aa5.48□□□□□ -1.53
CHD9-214ENST00000565119 YY2O15391 372 aa5.48□□□□□ -1.53
CHD9-214ENST00000565119 FIBPO43427 364 aa5.48□□□□□ -1.53
CHD9-214ENST00000565119 TGM5O43548 720 aa5.48□□□□□ -1.53
CHD9-214ENST00000565119 PTPN7P35236 360 aa5.48□□□□□ -1.53
CHD9-214ENST00000565119 GRIA3P42263 894 aa5.48□□□□□ -1.53
CHD9-214ENST00000565119 CLK1P49759 484 aaKnown RBP5.48□□□□□ -1.53
CHD9-214ENST00000565119 MMP14P50281 582 aa5.48□□□□□ -1.53
CHD9-214ENST00000565119 EIF5P55010 431 aaKnown RBP5.48□□□□□ -1.53
CHD9-214ENST00000565119 SOX10P56693 466 aa5.48□□□□□ -1.53
CHD9-214ENST00000565119 ZNF280AP59817 542 aaPredicted RBP5.48□□□□□ -1.53
CHD9-214ENST00000565119 SLC10A2Q12908 348 aaPredicted RBP5.48□□□□□ -1.53
CHD9-214ENST00000565119 GRM1Q13255 1194 aa5.48□□□□□ -1.53
CHD9-214ENST00000565119 TAF11Q15544 211 aa5.48□□□□□ -1.53
CHD9-214ENST00000565119 KAZNQ674X7 775 aa5.48□□□□□ -1.53
CHD9-214ENST00000565119 IL31Q6EBC2 164 aa5.48□□□□□ -1.53
CHD9-214ENST00000565119 CXorf57Q6NSI4 855 aaKnown RBP5.48□□□□□ -1.53
CHD9-214ENST00000565119 PASD1Q8IV76 773 aa5.48□□□□□ -1.53
CHD9-214ENST00000565119 COLGALT2Q8IYK4 626 aa5.48□□□□□ -1.53
CHD9-214ENST00000565119 OTUD6BQ8N6M0 293 aa5.48□□□□□ -1.53
CHD9-214ENST00000565119 EFHBQ8N7U6 833 aa5.48□□□□□ -1.53
CHD9-214ENST00000565119 LSM14AQ8ND56 463 aaKnown RBP5.48□□□□□ -1.53
CHD9-214ENST00000565119 SEMA6DQ8NFY4 1073 aa5.48□□□□□ -1.53
CHD9-214ENST00000565119 ELAC2Q9BQ52 826 aaKnown RBP5.48□□□□□ -1.53
CHD9-214ENST00000565119 MS4A5Q9H3V2 200 aa5.48□□□□□ -1.53
CHD9-214ENST00000565119 RIC8AQ9NPQ8 531 aa5.48□□□□□ -1.53
CHD9-214ENST00000565119 PRDM11Q9NQV5 511 aa5.48□□□□□ -1.53
CHD9-214ENST00000565119 C9orf78Q9NZ63 289 aaPredicted RBP5.48□□□□□ -1.53
CHD9-214ENST00000565119 MAPRE3Q9UPY8 281 aa5.48□□□□□ -1.53
CHD9-214ENST00000565119 SIK3Q9Y2K2 1263 aa5.48□□□□□ -1.53
CHD9-214ENST00000565119 IPPQ9Y573 584 aa5.48□□□□□ -1.53
CHD9-214ENST00000565119 PIP5K1CO60331 668 aa5.47□□□□□ -1.53
CHD9-214ENST00000565119 PDE8AO60658 829 aa5.47□□□□□ -1.53
CHD9-214ENST00000565119 KATNA1O75449 491 aa5.47□□□□□ -1.53
CHD9-214ENST00000565119 ERN1O75460 977 aaKnown RBP5.47□□□□□ -1.53
CHD9-214ENST00000565119 RFPL3O75679 317 aa5.47□□□□□ -1.53
CHD9-214ENST00000565119 U2AF1L5P0DN76 240 aaPredicted RBP5.47□□□□□ -1.53
CHD9-214ENST00000565119 SLC6A2P23975 617 aa5.47□□□□□ -1.53
CHD9-214ENST00000565119 ATICP31939 592 aa5.47□□□□□ -1.53
CHD9-214ENST00000565119 SREBF1P36956 1147 aa5.47□□□□□ -1.53
CHD9-214ENST00000565119 NEK3P51956 506 aa5.47□□□□□ -1.53
CHD9-214ENST00000565119 U2AF1Q01081 240 aaKnown RBP eCLIP5.47□□□□□ -1.53
CHD9-214ENST00000565119 WDR45BQ5MNZ6 344 aa5.47□□□□□ -1.53
CHD9-214ENST00000565119 GPR158Q5T848 1215 aa5.47□□□□□ -1.53
CHD9-214ENST00000565119 MZT2AQ6P582 158 aa5.47□□□□□ -1.53
CHD9-214ENST00000565119 CFAP161Q6P656 301 aa5.47□□□□□ -1.53
CHD9-214ENST00000565119 FOXR2Q6PJQ5 311 aa5.47□□□□□ -1.53
CHD9-214ENST00000565119 ZNF572Q7Z3I7 529 aaPredicted RBP5.47□□□□□ -1.53
CHD9-214ENST00000565119 RASSF3Q86WH2 238 aa5.47□□□□□ -1.53
CHD9-214ENST00000565119 TRMT2AQ8IZ69 625 aaKnown RBP5.47□□□□□ -1.53
CHD9-214ENST00000565119 NKAIN3Q8N8D7 197 aa5.47□□□□□ -1.53
CHD9-214ENST00000565119 SCLT1Q96NL6 688 aa5.47□□□□□ -1.53
CHD9-214ENST00000565119 SEZ6LQ9BYH1 1024 aa5.47□□□□□ -1.53
CHD9-214ENST00000565119 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.47□□□□□ -1.534e-6■■□□□ 13.6
CHD9-214ENST00000565119 ODF2LQ9ULJ1 636 aa5.47□□□□□ -1.53
CHD9-214ENST00000565119 TBC1D30Q9Y2I9 924 aa5.47□□□□□ -1.53
CHD9-214ENST00000565119 WASHC2AQ641Q2 1341 aa5.47□□□□□ -1.53
CHD9-214ENST00000565119 PHLDB1Q86UU1 1377 aa5.46□□□□□ -1.54
CHD9-214ENST00000565119 GSG1L2A8MUP6 293 aa5.46□□□□□ -1.54
CHD9-214ENST00000565119 PRPF3O43395 683 aaKnown RBP5.46□□□□□ -1.54
CHD9-214ENST00000565119 ABLIM3O94929 683 aa5.46□□□□□ -1.54
CHD9-214ENST00000565119 EYA4O95677 639 aa5.46□□□□□ -1.54
CHD9-214ENST00000565119 ALOX15P16050 662 aaPredicted RBP5.46□□□□□ -1.54
CHD9-214ENST00000565119 NEXNQ0ZGT2 675 aa5.46□□□□□ -1.54
CHD9-214ENST00000565119 DDX10Q13206 875 aaKnown RBP5.46□□□□□ -1.54
CHD9-214ENST00000565119 PDE1CQ14123 709 aaPredicted RBP5.46□□□□□ -1.54
CHD9-214ENST00000565119 TOMM20Q15388 145 aa5.46□□□□□ -1.54
CHD9-214ENST00000565119 RRP12Q5JTH9 1297 aaKnown RBP5.46□□□□□ -1.54
CHD9-214ENST00000565119 MORN5Q5VZ52 161 aa5.46□□□□□ -1.54
CHD9-214ENST00000565119 JAKMIP3Q5VZ66 844 aa5.46□□□□□ -1.54
CHD9-214ENST00000565119 SLC9A4Q6AI14 798 aa5.46□□□□□ -1.54
CHD9-214ENST00000565119 VWA1Q6PCB0 445 aa5.46□□□□□ -1.54
CHD9-214ENST00000565119 LVRNQ6Q4G3 990 aa5.46□□□□□ -1.54
CHD9-214ENST00000565119 C16orf54Q6UWD8 224 aa5.46□□□□□ -1.54
CHD9-214ENST00000565119 UBE2R2Q712K3 238 aaPredicted RBP5.46□□□□□ -1.54
CHD9-214ENST00000565119 CHCHD4Q8N4Q1 142 aa5.46□□□□□ -1.54
CHD9-214ENST00000565119 VPS37AQ8NEZ2 397 aa5.46□□□□□ -1.54
CHD9-214ENST00000565119 FBXO18Q8NFZ0 1043 aa5.46□□□□□ -1.54
CHD9-214ENST00000565119 TFAP2BQ92481 460 aa5.46□□□□□ -1.54
CHD9-214ENST00000565119 HOOK2Q96ED9 719 aa5.46□□□□□ -1.54
CHD9-214ENST00000565119 PAWRQ96IZ0 340 aaKnown RBP5.46□□□□□ -1.54
CHD9-214ENST00000565119 MYCBPQ99417 103 aaPredicted RBP5.46□□□□□ -1.54
CHD9-214ENST00000565119 PLCB1Q9NQ66 1216 aa5.46□□□□□ -1.54
CHD9-214ENST00000565119 LUC7L2Q9Y383 392 aaKnown RBP5.46□□□□□ -1.54
CHD9-214ENST00000565119 SPEF1Q9Y4P9 236 aa5.46□□□□□ -1.54
CHD9-214ENST00000565119 MPPED1O15442 326 aa5.45□□□□□ -1.54
CHD9-214ENST00000565119 HNRNPCP07910 306 aaKnown RBP eCLIP5.45□□□□□ -1.54
CHD9-214ENST00000565119 CPEP16870 476 aa5.45□□□□□ -1.54
CHD9-214ENST00000565119 SERPINB3P29508 390 aa5.45□□□□□ -1.54
CHD9-214ENST00000565119 TSPAN7P41732 249 aa5.45□□□□□ -1.54
CHD9-214ENST00000565119 MTMR1Q13613 665 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms