RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 PAGE5Q96GU1 130 aa14.69□□□□□ -0.06
VPS9D1-204ENST00000565023 ANKRD36BP1Q96IX9 119 aa14.69□□□□□ -0.06
VPS9D1-204ENST00000565023 SEPT5Q99719 369 aaPredicted RBP14.69□□□□□ -0.06
VPS9D1-204ENST00000565023 AGPAT3Q9NRZ7 376 aa14.69□□□□□ -0.06
VPS9D1-204ENST00000565023 R3HCC1Q9Y3T6 440 aaKnown RBP14.69□□□□□ -0.06
VPS9D1-204ENST00000565023 PTPRJQ12913 1337 aa14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 GOLGA6L4A6NEF3 574 aa14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 ANHXE9PGG2 379 aa14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 NRG2O14511 850 aaPredicted RBP14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 TGFB1I1O43294 461 aa14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 TNNC2P02585 160 aa14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 DLATP10515 647 aaKnown RBP14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 SRFP11831 508 aa14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 CCR2P41597 374 aa14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 ALDH1A3P47895 512 aa14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 POU5F1Q01860 360 aaKnown RBP14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 GPR17Q13304 367 aa14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 MYBPC2Q14324 1141 aa14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 MGAT5BQ3V5L5 792 aa14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 KMT5BQ4FZB7 885 aa14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 POTEHQ6S545 545 aa14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 MTSS1LQ765P7 747 aa14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 HS2ST1Q7LGA3 356 aa14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 TMEM105Q8N8V8 129 aa14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 OR5B17Q8NGF7 314 aa14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 NXPE3Q969Y0 559 aa14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 CCDC127Q96BQ5 260 aa14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 BORCS6Q96GS4 357 aa14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 RTP3Q9BQQ7 232 aa14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 OXCT2Q9BYC2 517 aaPredicted RBP14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 ASAH2Q9NR71 780 aa14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 DSEQ9UL01 958 aa14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 ZFP37Q9Y6Q3 630 aaPredicted RBP14.68□□□□□ -0.06
VPS9D1-204ENST00000565023 UBE4BO95155 1302 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 PVALEFA0A1B0GWK0 134 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 KRBA1A5PL33 1030 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 KIAA0391O15091 583 aaKnown RBP14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 KLRC4O43908 158 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 CLSTN1O94985 981 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 ZNF202O95125 648 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 CYP11A1P05108 521 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 PRR29P0C7W0 189 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 TNNI1P19237 187 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 PAX3P23760 479 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 ACAT1P24752 427 aaKnown RBP14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 PNPLA4P41247 253 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 EPHB3P54753 998 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 GPC5P78333 572 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 EHHADHQ08426 723 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 TEAD2Q15562 447 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 PRSS36Q5K4E3 855 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 CWF19L1Q69YN2 538 aaKnown RBP14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 CENPPQ6IPU0 288 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 KRBA2Q6ZNG9 492 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 GPIHBP1Q8IV16 184 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 DNAJC25Q9H1X3 360 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 SLITRK6Q9H5Y7 841 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 FAM86C1Q9NVL1 165 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 INTS13Q9NVM9 706 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 ABI2Q9NYB9 513 aaPredicted RBP14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 ITGA11Q9UKX5 1188 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 L1RE1Q9UN81 338 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 SNX9Q9Y5X1 595 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 COL4A3Q01955 1670 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 DCHS1Q96JQ0 3298 aa14.67□□□□□ -0.06
VPS9D1-204ENST00000565023 ZNF197O14709 1029 aa14.66□□□□□ -0.06
VPS9D1-204ENST00000565023 PI15O43692 258 aa14.66□□□□□ -0.06
VPS9D1-204ENST00000565023 HUS1O60921 280 aa14.66□□□□□ -0.06
VPS9D1-204ENST00000565023 MYL1P05976 194 aa14.66□□□□□ -0.06
VPS9D1-204ENST00000565023 NPR3P17342 541 aa14.66□□□□□ -0.06
VPS9D1-204ENST00000565023 RBP5P82980 135 aa14.66□□□□□ -0.06
VPS9D1-204ENST00000565023 STK4Q13043 487 aa14.66□□□□□ -0.06
VPS9D1-204ENST00000565023 PLD1Q13393 1074 aa14.66□□□□□ -0.06
VPS9D1-204ENST00000565023 SNW1Q13573 536 aaKnown RBP14.66□□□□□ -0.06
VPS9D1-204ENST00000565023 GRM2Q14416 872 aa14.66□□□□□ -0.06
VPS9D1-204ENST00000565023 SURF1Q15526 300 aa14.66□□□□□ -0.06
VPS9D1-204ENST00000565023 SNRNP35Q16560 246 aaKnown RBP14.66□□□□□ -0.06
VPS9D1-204ENST00000565023 ASTLQ6HA08 431 aaPredicted RBP14.66□□□□□ -0.06
VPS9D1-204ENST00000565023 LRRTM3Q86VH5 581 aa14.66□□□□□ -0.06
VPS9D1-204ENST00000565023 OSTM1Q86WC4 334 aa14.66□□□□□ -0.06
VPS9D1-204ENST00000565023 FMR1NBQ8N0W7 255 aaPredicted RBP14.66□□□□□ -0.06
VPS9D1-204ENST00000565023 XXYLT1Q8NBI6 393 aa14.66□□□□□ -0.06
VPS9D1-204ENST00000565023 ENGASEQ8NFI3 743 aa14.66□□□□□ -0.06
VPS9D1-204ENST00000565023 GIPC2Q8TF65 315 aa14.66□□□□□ -0.06
VPS9D1-204ENST00000565023 FNBP1Q96RU3 617 aa14.66□□□□□ -0.06
VPS9D1-204ENST00000565023 LPIN3Q9BQK8 851 aa14.66□□□□□ -0.06
VPS9D1-204ENST00000565023 PLA2G2FQ9BZM2 168 aa14.66□□□□□ -0.06
VPS9D1-204ENST00000565023 ZCWPW1Q9H0M4 648 aa14.66□□□□□ -0.06
VPS9D1-204ENST00000565023 SIX4Q9UIU6 781 aa14.66□□□□□ -0.06
VPS9D1-204ENST00000565023 A0A1W2PRU2 124 aa14.65□□□□□ -0.06
VPS9D1-204ENST00000565023 HCRTO43612 131 aa14.65□□□□□ -0.06
VPS9D1-204ENST00000565023 EXOC3O60645 756 aa14.65□□□□□ -0.06
VPS9D1-204ENST00000565023 TSPY1Q01534 308 aa14.65□□□□□ -0.06
VPS9D1-204ENST00000565023 TAF12Q16514 161 aa14.65□□□□□ -0.06
VPS9D1-204ENST00000565023 KNOP1Q1ED39 458 aaKnown RBP14.65□□□□□ -0.06
VPS9D1-204ENST00000565023 DUOXA2Q1HG44 320 aa14.65□□□□□ -0.06
VPS9D1-204ENST00000565023 TANGO2Q6ICL3 276 aa14.65□□□□□ -0.06
VPS9D1-204ENST00000565023 CLEC17AQ6ZS10 378 aa14.65□□□□□ -0.06
VPS9D1-204ENST00000565023 PDCL2Q8N4E4 241 aa14.65□□□□□ -0.06
VPS9D1-204ENST00000565023 LRRC52Q8N7C0 313 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms