RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 SOX5P35711 763 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 PNPLA4P41247 253 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 ASPAP45381 313 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 TNNC1P63316 161 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 CCZ1BP86790 482 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 CCZ1P86791 482 aaPredicted RBP11.87□□□□□ -0.51
SF3B3-205ENST00000564899 ARID5AQ03989 594 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 ZP2Q05996 745 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 TUSC3Q13454 348 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 MEA1Q16626 185 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 WDR72Q3MJ13 1102 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 FMNL3Q8IVF7 1028 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 SHC3Q92529 594 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 FAXDC2Q96IV6 333 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 RAD9AQ99638 391 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 ARID3AQ99856 593 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 GPR88Q9GZN0 384 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 KANSL3Q9P2N6 904 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 POLIQ9UNA4 740 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.87□□□□□ -0.51
SF3B3-205ENST00000564899 MICAL3Q7RTP6 2002 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 WDR87Q6ZQQ6 2873 aa11.87□□□□□ -0.51
SF3B3-205ENST00000564899 CACNA1HO95180 2353 aa11.86□□□□□ -0.51
SF3B3-205ENST00000564899 FOXN3O00409 490 aaPredicted RBP11.86□□□□□ -0.51
SF3B3-205ENST00000564899 PODXLO00592 558 aa11.86□□□□□ -0.51
SF3B3-205ENST00000564899 DCXO43602 365 aa11.86□□□□□ -0.51
SF3B3-205ENST00000564899 GFPT2O94808 682 aa11.86□□□□□ -0.51
SF3B3-205ENST00000564899 AMHP03971 560 aa11.86□□□□□ -0.51
SF3B3-205ENST00000564899 SKILP12757 684 aa11.86□□□□□ -0.51
SF3B3-205ENST00000564899 KRT5P13647 590 aa11.86□□□□□ -0.51
SF3B3-205ENST00000564899 FERP16591 822 aa11.86□□□□□ -0.51
SF3B3-205ENST00000564899 RPL9P32969 192 aaKnown RBP11.86□□□□□ -0.51
SF3B3-205ENST00000564899 USP8P40818 1118 aa11.86□□□□□ -0.51
SF3B3-205ENST00000564899 TAF6P49848 677 aa11.86□□□□□ -0.51
SF3B3-205ENST00000564899 GATMP50440 423 aa11.86□□□□□ -0.51
SF3B3-205ENST00000564899 YWHAEP62258 255 aaKnown RBP11.86□□□□□ -0.51
SF3B3-205ENST00000564899 SV2CQ496J9 727 aa11.86□□□□□ -0.51
SF3B3-205ENST00000564899 TDRD12Q587J7 1177 aaKnown RBP11.86□□□□□ -0.51
SF3B3-205ENST00000564899 TCEAL5Q5H9L2 206 aa11.86□□□□□ -0.51
SF3B3-205ENST00000564899 CYP26C1Q6V0L0 522 aa11.86□□□□□ -0.51
SF3B3-205ENST00000564899 TMEM139Q8IV31 216 aa11.86□□□□□ -0.51
SF3B3-205ENST00000564899 FBXO22Q8NEZ5 403 aa11.86□□□□□ -0.51
SF3B3-205ENST00000564899 RSPH1Q8WYR4 309 aa11.86□□□□□ -0.51
SF3B3-205ENST00000564899 JAKMIP2Q96AA8 810 aa11.86□□□□□ -0.51
SF3B3-205ENST00000564899 UROC1Q96N76 676 aa11.86□□□□□ -0.51
SF3B3-205ENST00000564899 SMYD3Q9H7B4 428 aa11.86□□□□□ -0.51
SF3B3-205ENST00000564899 TBC1D13Q9NVG8 400 aa11.86□□□□□ -0.51
SF3B3-205ENST00000564899 AIPL1Q9NZN9 384 aa11.86□□□□□ -0.51
SF3B3-205ENST00000564899 SOWAHDA6NJG2 315 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 TBKBP1A7MCY6 615 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 UPP2O95045 317 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 SERPING1P05155 500 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 WEE2P0C1S8 567 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 CCDC172P0C7W6 258 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 CD58P19256 250 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 ACO1P21399 889 aaKnown RBP11.85□□□□□ -0.51
SF3B3-205ENST00000564899 IRS1P35568 1242 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 LTBRP36941 435 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 CLCNKBP51801 687 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 CDK17Q00537 523 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 RNASELQ05823 741 aaKnown RBP11.85□□□□□ -0.51
SF3B3-205ENST00000564899 DLX2Q07687 328 aaPredicted RBP11.85□□□□□ -0.51
SF3B3-205ENST00000564899 KLHL30Q0D2K2 578 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 CLUL1Q15846 466 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 WDR59Q6PJI9 974 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 TMTC1Q8IUR5 882 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 FAM71AQ8IYT1 594 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 CRIPAKQ8N1N5 446 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 UBR7Q8N806 425 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 PRSS33Q8NF86 280 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 DDX27Q96GQ7 796 aaKnown RBP11.85□□□□□ -0.51
SF3B3-205ENST00000564899 CASD1Q96PB1 797 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 FAM193BQ96PV7 902 aaPredicted RBP11.85□□□□□ -0.51
SF3B3-205ENST00000564899 MMS19Q96T76 1030 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 CHP1Q99653 195 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 MRPL9Q9BYD2 267 aaKnown RBP11.85□□□□□ -0.51
SF3B3-205ENST00000564899 BCO2Q9BYV7 579 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 CYP3A43Q9HB55 503 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 CACNG4Q9UBN1 327 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 PCDHB4Q9Y5E5 795 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 SNX9Q9Y5X1 595 aa11.85□□□□□ -0.51
SF3B3-205ENST00000564899 C19orf67A6NJJ6 358 aa11.84□□□□□ -0.51
SF3B3-205ENST00000564899 KPNA7A9QM74 516 aa11.84□□□□□ -0.51
SF3B3-205ENST00000564899 SPTLC1O15269 473 aa11.84□□□□□ -0.51
SF3B3-205ENST00000564899 ARHGAP6O43182 974 aa11.84□□□□□ -0.51
SF3B3-205ENST00000564899 DDHD2O94830 711 aa11.84□□□□□ -0.51
SF3B3-205ENST00000564899 PLEKP08567 350 aaPredicted RBP11.84□□□□□ -0.51
SF3B3-205ENST00000564899 ALADP13716 330 aa11.84□□□□□ -0.51
SF3B3-205ENST00000564899 PRKCIP41743 596 aa11.84□□□□□ -0.51
SF3B3-205ENST00000564899 RAP1GAPP47736 663 aa11.84□□□□□ -0.51
SF3B3-205ENST00000564899 DSC1Q08554 894 aa11.84□□□□□ -0.51
SF3B3-205ENST00000564899 UPP1Q16831 310 aa11.84□□□□□ -0.51
SF3B3-205ENST00000564899 IER5LQ5T953 404 aa11.84□□□□□ -0.51
SF3B3-205ENST00000564899 HGSNATQ68CP4 663 aa11.84□□□□□ -0.51
SF3B3-205ENST00000564899 TMEM270Q6UE05 265 aa11.84□□□□□ -0.51
SF3B3-205ENST00000564899 EP400NLQ6ZTU2 488 aa11.84□□□□□ -0.51
SF3B3-205ENST00000564899 IRF2BP2Q7Z5L9 587 aa11.84□□□□□ -0.51
SF3B3-205ENST00000564899 ZNF280BQ86YH2 543 aa11.84□□□□□ -0.51
SF3B3-205ENST00000564899 LRRC43Q8N309 656 aa11.84□□□□□ -0.51
SF3B3-205ENST00000564899 RBBP8NLQ8NC74 664 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms