RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 A0A087WWL8 130 aa5.69□□□□□ -1.5
LINC00560-201ENST00000564593 KLRG2A4D1S0 409 aaPredicted RBP5.69□□□□□ -1.5
LINC00560-201ENST00000564593 PYCARD-AS1I3L0S3 204 aa5.69□□□□□ -1.5
LINC00560-201ENST00000564593 ITGB3P05106 788 aa5.69□□□□□ -1.5
LINC00560-201ENST00000564593 ABCB4P21439 1286 aa5.69□□□□□ -1.5
LINC00560-201ENST00000564593 MAN2A2P49641 1150 aa5.69□□□□□ -1.5
LINC00560-201ENST00000564593 PIGFQ07326 219 aa5.69□□□□□ -1.5
LINC00560-201ENST00000564593 CRHR2Q13324 411 aa5.69□□□□□ -1.5
LINC00560-201ENST00000564593 AGAP9Q5VTM2 703 aa5.69□□□□□ -1.5
LINC00560-201ENST00000564593 METRNLQ641Q3 311 aa5.69□□□□□ -1.5
LINC00560-201ENST00000564593 HIBCHQ6NVY1 386 aaPredicted RBP5.69□□□□□ -1.5
LINC00560-201ENST00000564593 HTR3DQ70Z44 454 aa5.69□□□□□ -1.5
LINC00560-201ENST00000564593 CERS3Q8IU89 383 aa5.69□□□□□ -1.5
LINC00560-201ENST00000564593 CFAP52Q8N1V2 620 aa5.69□□□□□ -1.5
LINC00560-201ENST00000564593 RNF152Q8N8N0 203 aa5.69□□□□□ -1.5
LINC00560-201ENST00000564593 ATP11CQ8NB49 1132 aa5.69□□□□□ -1.5
LINC00560-201ENST00000564593 BRI3BPQ8WY22 251 aa5.69□□□□□ -1.5
LINC00560-201ENST00000564593 PNKPQ96T60 521 aa5.69□□□□□ -1.5
LINC00560-201ENST00000564593 SMOQ99835 787 aa5.69□□□□□ -1.5
LINC00560-201ENST00000564593 SELENOOQ9BVL4 669 aa5.69□□□□□ -1.5
LINC00560-201ENST00000564593 COLEC11Q9BWP8 271 aa5.69□□□□□ -1.5
LINC00560-201ENST00000564593 A1CFQ9NQ94 594 aaKnown RBP5.69□□□□□ -1.5
LINC00560-201ENST00000564593 SERHLQ9NQF3 203 aa5.69□□□□□ -1.5
LINC00560-201ENST00000564593 TRMT13Q9NUP7 481 aaKnown RBP5.69□□□□□ -1.5
LINC00560-201ENST00000564593 MRPS18AQ9NVS2 196 aaKnown RBP5.69□□□□□ -1.5
LINC00560-201ENST00000564593 GPRC5BQ9NZH0 403 aa5.69□□□□□ -1.5
LINC00560-201ENST00000564593 XPR1Q9UBH6 696 aa5.69□□□□□ -1.5
LINC00560-201ENST00000564593 EIF2B4Q9UI10 523 aaKnown RBP5.69□□□□□ -1.5
LINC00560-201ENST00000564593 ATP11BQ9Y2G3 1177 aa5.69□□□□□ -1.5
LINC00560-201ENST00000564593 USP15Q9Y4E8 981 aaPredicted RBP5.69□□□□□ -1.5
LINC00560-201ENST00000564593 XDHP47989 1333 aa5.69□□□□□ -1.5
LINC00560-201ENST00000564593 TMEM233B4DJY2 109 aa5.68□□□□□ -1.5
LINC00560-201ENST00000564593 F5H423 210 aaPredicted RBP5.68□□□□□ -1.5
LINC00560-201ENST00000564593 VPS4BO75351 444 aa5.68□□□□□ -1.5
LINC00560-201ENST00000564593 FGF18O76093 207 aa5.68□□□□□ -1.5
LINC00560-201ENST00000564593 SCNN1GP51170 649 aa5.68□□□□□ -1.5
LINC00560-201ENST00000564593 RNASE9P60153 205 aaKnown RBP5.68□□□□□ -1.5
LINC00560-201ENST00000564593 HTRA4P83105 476 aaPredicted RBP5.68□□□□□ -1.5
LINC00560-201ENST00000564593 ZNF844Q08AG5 666 aa5.68□□□□□ -1.5
LINC00560-201ENST00000564593 CNGB1Q14028 1251 aaPredicted RBP5.68□□□□□ -1.5
LINC00560-201ENST00000564593 ICAM4Q14773 271 aa5.68□□□□□ -1.5
LINC00560-201ENST00000564593 ARL13BQ3SXY8 428 aa5.68□□□□□ -1.5
LINC00560-201ENST00000564593 DGKKQ5KSL6 1271 aa5.68□□□□□ -1.5
LINC00560-201ENST00000564593 IQCDQ96DY2 449 aa5.68□□□□□ -1.5
LINC00560-201ENST00000564593 SNX22Q96L94 193 aa5.68□□□□□ -1.5
LINC00560-201ENST00000564593 NEU1Q99519 415 aa5.68□□□□□ -1.5
LINC00560-201ENST00000564593 STK31Q9BXU1 1019 aa5.68□□□□□ -1.5
LINC00560-201ENST00000564593 TMPRSS5Q9H3S3 457 aa5.68□□□□□ -1.5
LINC00560-201ENST00000564593 DEF6Q9H4E7 631 aa5.68□□□□□ -1.5
LINC00560-201ENST00000564593 ITGB1BP2Q9UKP3 347 aa5.68□□□□□ -1.5
LINC00560-201ENST00000564593 LRCH1Q9Y2L9 728 aa5.68□□□□□ -1.5
LINC00560-201ENST00000564593 AATKQ6ZMQ8 1374 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 DIRC3C9JPN6 131 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 POLRMTO00411 1230 aaKnown RBP5.67□□□□□ -1.5
LINC00560-201ENST00000564593 MT-ND5P03915 603 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 FDXRP22570 491 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 PMS2P11Q13670 270 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 GRAMD1BQ3KR37 738 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 FAM83BQ5T0W9 1011 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 DCAF12L1Q5VU92 463 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 UNC13DQ70J99 1090 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 PPP1R32Q7Z5V6 425 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 MYLK4Q86YV6 388 aaPredicted RBP5.67□□□□□ -1.5
LINC00560-201ENST00000564593 NSUN7Q8NE18 718 aaKnown RBP5.67□□□□□ -1.5
LINC00560-201ENST00000564593 OR56A1Q8NGH5 318 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 OR56A3Q8NH54 315 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 WWC2-AS2Q96NR7 200 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 TRIB1Q96RU8 372 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 DCLRE1CQ96SD1 692 aaKnown RBP5.67□□□□□ -1.5
LINC00560-201ENST00000564593 ADOQ96SZ5 270 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 SPATA5L1Q9BVQ7 753 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 MS4A7Q9GZW8 240 aaPredicted RBP5.67□□□□□ -1.5
LINC00560-201ENST00000564593 RNPEPQ9H4A4 650 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 PTPRHQ9HD43 1115 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 CEP83Q9Y592 693 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 A0A1B0GTW7 788 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 MBD3L4A6NDZ8 208 aaPredicted RBP5.67□□□□□ -1.5
LINC00560-201ENST00000564593 MBD3L3A6NE82 208 aaPredicted RBP5.67□□□□□ -1.5
LINC00560-201ENST00000564593 ZNF185O15231 689 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 THAP12O43422 761 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 RASSF9O75901 435 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 ANXA2P07355 339 aaKnown RBP5.67□□□□□ -1.5
LINC00560-201ENST00000564593 ADRB1P08588 477 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 HARSP12081 509 aaKnown RBP5.67□□□□□ -1.5
LINC00560-201ENST00000564593 KLRC1P26715 233 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 PPM1AP35813 382 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 MAPK10P53779 464 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 TCF15Q12870 199 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 RRP1BQ14684 758 aaKnown RBP5.67□□□□□ -1.5
LINC00560-201ENST00000564593 TAPT1Q6NXT6 567 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 SLC30A10Q6XR72 485 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 RNF44Q7L0R7 432 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 POF1BQ8WVV4 589 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 RAPGEF4Q8WZA2 1011 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 EDAQ92838 391 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 LOXL4Q96JB6 756 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 MOGAT1Q96PD6 335 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 ZSWIM1Q9BR11 485 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 BDH2Q9BUT1 245 aa5.67□□□□□ -1.5
LINC00560-201ENST00000564593 CHST8Q9H2A9 424 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms