RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 UPP1Q16831 310 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 ARHGAP44Q17R89 818 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 IQCEQ6IPM2 695 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 SPOPLQ6IQ16 392 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 GJB7Q6PEY0 223 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 RRAGAQ7L523 313 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 ADGRD2Q7Z7M1 963 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 CNGA4Q8IV77 575 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 FMNL3Q8IVF7 1028 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 ARHGEF19Q8IW93 802 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 COLGALT2Q8IYK4 626 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 MICAL1Q8TDZ2 1067 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 JAKMIP2Q96AA8 810 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 PDLIM2Q96JY6 352 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 SPAG5Q96R06 1193 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 STK33Q9BYT3 514 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 NIF3L1Q9GZT8 377 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 NUCKS1Q9H1E3 243 aaKnown RBP18.15■□□□□ 0.5
CMTM3-208ENST00000564247 NRDE2Q9H7Z3 1164 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 CLDND1Q9NY35 253 aa18.15■□□□□ 0.5
CMTM3-208ENST00000564247 KPNA7A9QM74 516 aa18.14■□□□□ 0.49
CMTM3-208ENST00000564247 PPEF2O14830 753 aa18.14■□□□□ 0.49
CMTM3-208ENST00000564247 B3GAT3O94766 335 aa18.14■□□□□ 0.49
CMTM3-208ENST00000564247 GYPCP04921 128 aa18.14■□□□□ 0.49
CMTM3-208ENST00000564247 GALTP07902 379 aa18.14■□□□□ 0.49
CMTM3-208ENST00000564247 KRT9P35527 623 aa18.14■□□□□ 0.49
CMTM3-208ENST00000564247 LTBRP36941 435 aa18.14■□□□□ 0.49
CMTM3-208ENST00000564247 LILRA4P59901 499 aa18.14■□□□□ 0.49
CMTM3-208ENST00000564247 YWHAEP62258 255 aaKnown RBP18.14■□□□□ 0.49
CMTM3-208ENST00000564247 ZBED6P86452 979 aa18.14■□□□□ 0.49
CMTM3-208ENST00000564247 APBA1Q02410 837 aa18.14■□□□□ 0.49
CMTM3-208ENST00000564247 CUL2Q13617 745 aa18.14■□□□□ 0.49
CMTM3-208ENST00000564247 SCARA3Q6AZY7 606 aa18.14■□□□□ 0.49
CMTM3-208ENST00000564247 DPY19L2P1Q6NXN4 242 aa18.14■□□□□ 0.49
CMTM3-208ENST00000564247 DSTYKQ6XUX3 929 aa18.14■□□□□ 0.49
CMTM3-208ENST00000564247 TMEM130Q8N3G9 435 aa18.14■□□□□ 0.49
CMTM3-208ENST00000564247 MMS19Q96T76 1030 aa18.14■□□□□ 0.49
CMTM3-208ENST00000564247 APOBEC3GQ9HC16 384 aaKnown RBP18.14■□□□□ 0.49
CMTM3-208ENST00000564247 NGRNQ9NPE2 291 aaKnown RBP18.14■□□□□ 0.49
CMTM3-208ENST00000564247 MYO6Q9UM54 1294 aa18.14■□□□□ 0.49
CMTM3-208ENST00000564247 FAN1Q9Y2M0 1017 aa18.14■□□□□ 0.49
CMTM3-208ENST00000564247 PCDHGC5Q9Y5F6 944 aa18.14■□□□□ 0.49
CMTM3-208ENST00000564247 FHOD1Q9Y613 1164 aa18.14■□□□□ 0.49
CMTM3-208ENST00000564247 SCN1AP35498 2009 aa18.13■□□□□ 0.49
CMTM3-208ENST00000564247 ARHGEF37A1IGU5 675 aa18.13■□□□□ 0.49
CMTM3-208ENST00000564247 NT5C1B-RDH14C9J2C7 533 aa18.13■□□□□ 0.49
CMTM3-208ENST00000564247 EPHB6O15197 1021 aa18.13■□□□□ 0.49
CMTM3-208ENST00000564247 TADA2AO75478 443 aa18.13■□□□□ 0.49
CMTM3-208ENST00000564247 GTF2F1P35269 517 aaKnown RBP eCLIP18.13■□□□□ 0.49
CMTM3-208ENST00000564247 STAT1P42224 750 aa18.13■□□□□ 0.49
CMTM3-208ENST00000564247 ADAM15Q13444 863 aa18.13■□□□□ 0.49
CMTM3-208ENST00000564247 PUS10Q3MIT2 529 aaKnown RBP18.13■□□□□ 0.49
CMTM3-208ENST00000564247 SMYD5Q6GMV2 418 aa18.13■□□□□ 0.49
CMTM3-208ENST00000564247 TTC39CQ8N584 583 aa18.13■□□□□ 0.49
CMTM3-208ENST00000564247 EFHBQ8N7U6 833 aa18.13■□□□□ 0.49
CMTM3-208ENST00000564247 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.13■□□□□ 0.49
CMTM3-208ENST00000564247 ELMO3Q96BJ8 720 aa18.13■□□□□ 0.49
CMTM3-208ENST00000564247 TMEM169Q96HH4 297 aa18.13■□□□□ 0.49
CMTM3-208ENST00000564247 PPP1R9BQ96SB3 815 aa18.13■□□□□ 0.49
CMTM3-208ENST00000564247 UHRF1Q96T88 793 aaPredicted RBP18.13■□□□□ 0.49
CMTM3-208ENST00000564247 TCF25Q9BQ70 676 aa18.13■□□□□ 0.49
CMTM3-208ENST00000564247 NAA15Q9BXJ9 866 aaKnown RBP18.13■□□□□ 0.49
CMTM3-208ENST00000564247 TTYH3Q9C0H2 523 aa18.13■□□□□ 0.49
CMTM3-208ENST00000564247 IGFLR1Q9H665 355 aa18.13■□□□□ 0.49
CMTM3-208ENST00000564247 CYP3A43Q9HB55 503 aa18.13■□□□□ 0.49
CMTM3-208ENST00000564247 ZNHIT6Q9NWK9 470 aaKnown RBP18.13■□□□□ 0.49
CMTM3-208ENST00000564247 GDAP2Q9NXN4 497 aa18.13■□□□□ 0.49
CMTM3-208ENST00000564247 SNX9Q9Y5X1 595 aa18.13■□□□□ 0.49
CMTM3-208ENST00000564247 NRP1O14786 923 aa18.12■□□□□ 0.49
CMTM3-208ENST00000564247 TRAPPC3O43617 180 aa18.12■□□□□ 0.49
CMTM3-208ENST00000564247 B4GALT3O60512 393 aa18.12■□□□□ 0.49
CMTM3-208ENST00000564247 HUS1O60921 280 aa18.12■□□□□ 0.49
CMTM3-208ENST00000564247 CCDC172P0C7W6 258 aa18.12■□□□□ 0.49
CMTM3-208ENST00000564247 NRIP1P48552 1158 aa18.12■□□□□ 0.49
CMTM3-208ENST00000564247 DRAP1Q14919 205 aaPredicted RBP18.12■□□□□ 0.49
CMTM3-208ENST00000564247 EP400NLQ6ZTU2 488 aa18.12■□□□□ 0.49
CMTM3-208ENST00000564247 DPH6Q7L8W6 267 aa18.12■□□□□ 0.49
CMTM3-208ENST00000564247 CCDC186Q7Z3E2 898 aa18.12■□□□□ 0.49
CMTM3-208ENST00000564247 OR8K1Q8NGG5 319 aa18.12■□□□□ 0.49
CMTM3-208ENST00000564247 RABGGTAQ92696 567 aa18.12■□□□□ 0.49
CMTM3-208ENST00000564247 IGSF21Q96ID5 467 aa18.12■□□□□ 0.49
CMTM3-208ENST00000564247 PAAF1Q9BRP4 392 aa18.12■□□□□ 0.49
CMTM3-208ENST00000564247 DNAI2Q9GZS0 605 aa18.12■□□□□ 0.49
CMTM3-208ENST00000564247 FAM124BQ9H5Z6 455 aaPredicted RBP18.12■□□□□ 0.49
CMTM3-208ENST00000564247 TLE6Q9H808 572 aa18.12■□□□□ 0.49
CMTM3-208ENST00000564247 DNAJB4Q9UDY4 337 aa18.12■□□□□ 0.49
CMTM3-208ENST00000564247 POLIQ9UNA4 740 aa18.12■□□□□ 0.49
CMTM3-208ENST00000564247 BDP1A6H8Y1 2624 aa18.12■□□□□ 0.49
CMTM3-208ENST00000564247 C5orf42Q9H799 3197 aa18.11■□□□□ 0.49
CMTM3-208ENST00000564247 H3BQ06 376 aaPredicted RBP18.11■□□□□ 0.49
CMTM3-208ENST00000564247 TMEM189-UBE2V1I3L0A0 370 aa18.11■□□□□ 0.49
CMTM3-208ENST00000564247 CYB561D2O14569 222 aa18.11■□□□□ 0.49
CMTM3-208ENST00000564247 LINC01565O15544 149 aa18.11■□□□□ 0.49
CMTM3-208ENST00000564247 MFAP3LO75121 409 aa18.11■□□□□ 0.49
CMTM3-208ENST00000564247 WEE2P0C1S8 567 aa18.11■□□□□ 0.49
CMTM3-208ENST00000564247 FAM163BP0C2L3 166 aa18.11■□□□□ 0.49
CMTM3-208ENST00000564247 USP8P40818 1118 aa18.11■□□□□ 0.49
CMTM3-208ENST00000564247 SLC11A1P49279 550 aa18.11■□□□□ 0.49
CMTM3-208ENST00000564247 ADKP55263 362 aaKnown RBP18.11■□□□□ 0.49
CMTM3-208ENST00000564247 DLX2Q07687 328 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms