RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 CHFRQ96EP1 664 aa17.38■□□□□ 0.37
RNF40-205ENST00000563909 FOXD4L1Q9NU39 408 aa17.38■□□□□ 0.37
RNF40-205ENST00000563909 NUB1Q9Y5A7 615 aa17.38■□□□□ 0.37
RNF40-205ENST00000563909 ABCA7Q8IZY2 2146 aa17.38■□□□□ 0.37
RNF40-205ENST00000563909 PCNX2A6NKB5 2137 aa17.37■□□□□ 0.37
RNF40-205ENST00000563909 H3BQV1 296 aa17.37■□□□□ 0.37
RNF40-205ENST00000563909 GUCY1B3Q02153 619 aa17.37■□□□□ 0.37
RNF40-205ENST00000563909 PLD1Q13393 1074 aa17.37■□□□□ 0.37
RNF40-205ENST00000563909 DMC1Q14565 340 aa17.37■□□□□ 0.37
RNF40-205ENST00000563909 MAPK6Q16659 721 aa17.37■□□□□ 0.37
RNF40-205ENST00000563909 GAREM2Q75VX8 874 aa17.37■□□□□ 0.37
RNF40-205ENST00000563909 RAB44Q7Z6P3 723 aaPredicted RBP17.37■□□□□ 0.37
RNF40-205ENST00000563909 DIS3L2Q8IYB7 885 aaKnown RBP17.37■□□□□ 0.37
RNF40-205ENST00000563909 NUSAP1Q9BXS6 441 aaKnown RBP17.37■□□□□ 0.37
RNF40-205ENST00000563909 DNAJC25Q9H1X3 360 aa17.37■□□□□ 0.37
RNF40-205ENST00000563909 CCDC86Q9H6F5 360 aaKnown RBP17.37■□□□□ 0.37
RNF40-205ENST00000563909 EVLQ9UI08 416 aaPredicted RBP17.37■□□□□ 0.37
RNF40-205ENST00000563909 OTOL1A6NHN0 477 aaPredicted RBP17.36■□□□□ 0.37
RNF40-205ENST00000563909 BTBD18B2RXH4 712 aa17.36■□□□□ 0.37
RNF40-205ENST00000563909 ACKR2O00590 384 aa17.36■□□□□ 0.37
RNF40-205ENST00000563909 USO1O60763 962 aaKnown RBP17.36■□□□□ 0.37
RNF40-205ENST00000563909 DRD1P21728 446 aa17.36■□□□□ 0.37
RNF40-205ENST00000563909 BCKDHBP21953 392 aa17.36■□□□□ 0.37
RNF40-205ENST00000563909 RARRES1P49788 294 aa17.36■□□□□ 0.37
RNF40-205ENST00000563909 GALK1P51570 392 aa17.36■□□□□ 0.37
RNF40-205ENST00000563909 FAM193AP78312 1265 aa17.36■□□□□ 0.37
RNF40-205ENST00000563909 SEMA3BQ13214 749 aa17.36■□□□□ 0.37
RNF40-205ENST00000563909 RUNX3Q13761 415 aa17.36■□□□□ 0.37
RNF40-205ENST00000563909 DCAF4L1Q3SXM0 396 aa17.36■□□□□ 0.37
RNF40-205ENST00000563909 ARHGAP15Q53QZ3 475 aa17.36■□□□□ 0.37
RNF40-205ENST00000563909 POTEDQ86YR6 584 aa17.36■□□□□ 0.37
RNF40-205ENST00000563909 APPL2Q8NEU8 664 aa17.36■□□□□ 0.37
RNF40-205ENST00000563909 OXER1Q8TDS5 423 aa17.36■□□□□ 0.37
RNF40-205ENST00000563909 PGLYRP2Q96PD5 576 aa17.36■□□□□ 0.37
RNF40-205ENST00000563909 NAP1L4Q99733 375 aaKnown RBP17.36■□□□□ 0.37
RNF40-205ENST00000563909 EIF2AK1Q9BQI3 630 aaKnown RBP17.36■□□□□ 0.37
RNF40-205ENST00000563909 FAM83CQ9BQN1 747 aa17.36■□□□□ 0.37
RNF40-205ENST00000563909 TPSD1Q9BZJ3 242 aa17.36■□□□□ 0.37
RNF40-205ENST00000563909 SMG9Q9H0W8 520 aaKnown RBP17.36■□□□□ 0.37
RNF40-205ENST00000563909 C2orf40Q9H1Z8 148 aa17.36■□□□□ 0.37
RNF40-205ENST00000563909 EBF3Q9H4W6 596 aa17.36■□□□□ 0.37
RNF40-205ENST00000563909 HPS4Q9NQG7 708 aa17.36■□□□□ 0.37
RNF40-205ENST00000563909 CACNA2D2Q9NY47 1150 aa17.36■□□□□ 0.37
RNF40-205ENST00000563909 A0A087WWV3 80 aa17.35■□□□□ 0.37
RNF40-205ENST00000563909 UPK3BL1B0FP48 263 aa17.35■□□□□ 0.37
RNF40-205ENST00000563909 UPK3BL2E5RIL1 263 aa17.35■□□□□ 0.37
RNF40-205ENST00000563909 LYPLA2O95372 231 aa17.35■□□□□ 0.37
RNF40-205ENST00000563909 VNN2O95498 520 aa17.35■□□□□ 0.37
RNF40-205ENST00000563909 EDN1P05305 212 aa17.35■□□□□ 0.37
RNF40-205ENST00000563909 ENGP17813 658 aa17.35■□□□□ 0.37
RNF40-205ENST00000563909 U2AF2P26368 475 aaKnown RBP eCLIP17.35■□□□□ 0.37
RNF40-205ENST00000563909 ALDH1A3P47895 512 aa17.35■□□□□ 0.37
RNF40-205ENST00000563909 AMPD2Q01433 879 aa17.35■□□□□ 0.37
RNF40-205ENST00000563909 C19orf57Q0VDD7 668 aa17.35■□□□□ 0.37
RNF40-205ENST00000563909 DUSP4Q13115 394 aa17.35■□□□□ 0.37
RNF40-205ENST00000563909 GNL2Q13823 731 aaKnown RBP17.35■□□□□ 0.37
RNF40-205ENST00000563909 ZNF423Q2M1K9 1284 aa17.35■□□□□ 0.37
RNF40-205ENST00000563909 PIK3AP1Q6ZUJ8 805 aa17.35■□□□□ 0.37
RNF40-205ENST00000563909 DNAJB7Q7Z6W7 309 aaPredicted RBP17.35■□□□□ 0.37
RNF40-205ENST00000563909 SLFN12Q8IYM2 578 aa17.35■□□□□ 0.37
RNF40-205ENST00000563909 PIGOQ8TEQ8 1089 aa17.35■□□□□ 0.37
RNF40-205ENST00000563909 HSD17B14Q9BPX1 270 aa17.35■□□□□ 0.37
RNF40-205ENST00000563909 FOXP1Q9H334 677 aaPredicted RBP17.35■□□□□ 0.37
RNF40-205ENST00000563909 SLC38A7Q9NVC3 462 aa17.35■□□□□ 0.37
RNF40-205ENST00000563909 RAXQ9Y2V3 346 aa17.35■□□□□ 0.37
RNF40-205ENST00000563909 BAG4O95429 457 aaKnown RBP17.34■□□□□ 0.37
RNF40-205ENST00000563909 FGF19O95750 216 aa17.34■□□□□ 0.37
RNF40-205ENST00000563909 GABRR2P28476 465 aa17.34■□□□□ 0.37
RNF40-205ENST00000563909 NR5A1Q13285 461 aa17.34■□□□□ 0.37
RNF40-205ENST00000563909 FBXO43Q4G163 708 aa17.34■□□□□ 0.37
RNF40-205ENST00000563909 TRIM68Q6AZZ1 485 aa17.34■□□□□ 0.37
RNF40-205ENST00000563909 THADAQ6YHU6 1953 aa17.34■□□□□ 0.37
RNF40-205ENST00000563909 BEST2Q8NFU1 509 aa17.34■□□□□ 0.37
RNF40-205ENST00000563909 TSTD1Q8NFU3 115 aa17.34■□□□□ 0.37
RNF40-205ENST00000563909 DDX12PQ92771 950 aa17.34■□□□□ 0.37
RNF40-205ENST00000563909 TNFRSF25Q93038 417 aa17.34■□□□□ 0.37
RNF40-205ENST00000563909 ACDQ96AP0 544 aa17.34■□□□□ 0.37
RNF40-205ENST00000563909 SUSD3Q96L08 255 aa17.34■□□□□ 0.37
RNF40-205ENST00000563909 P2RY13Q9BPV8 354 aa17.34■□□□□ 0.37
RNF40-205ENST00000563909 POLR3CQ9BUI4 534 aaPredicted RBP17.34■□□□□ 0.37
RNF40-205ENST00000563909 CRISPLD1Q9H336 500 aa17.34■□□□□ 0.37
RNF40-205ENST00000563909 TASP1Q9H6P5 420 aa17.34■□□□□ 0.37
RNF40-205ENST00000563909 SLC27A5Q9Y2P5 690 aa17.34■□□□□ 0.37
RNF40-205ENST00000563909 CFAP46Q8IYW2 2715 aa17.34■□□□□ 0.37
RNF40-205ENST00000563909 CYSRT1A8MQ03 144 aa17.33■□□□□ 0.36
RNF40-205ENST00000563909 OR4Q2P0C623 313 aa17.33■□□□□ 0.36
RNF40-205ENST00000563909 PDIA4P13667 645 aaKnown RBP17.33■□□□□ 0.36
RNF40-205ENST00000563909 MARCKSP29966 332 aaPredicted RBP17.33■□□□□ 0.36
RNF40-205ENST00000563909 WEE1P30291 646 aa17.33■□□□□ 0.36
RNF40-205ENST00000563909 RPL9P32969 192 aaKnown RBP17.33■□□□□ 0.36
RNF40-205ENST00000563909 MCM4P33991 863 aa17.33■□□□□ 0.36
RNF40-205ENST00000563909 ANP32AP39687 249 aaKnown RBP17.33■□□□□ 0.36
RNF40-205ENST00000563909 YARSP54577 528 aaKnown RBP17.33■□□□□ 0.36
RNF40-205ENST00000563909 PSMD2Q13200 908 aa17.33■□□□□ 0.36
RNF40-205ENST00000563909 NAIF1Q69YI7 327 aaPredicted RBP17.33■□□□□ 0.36
RNF40-205ENST00000563909 ALKAL1Q6UXT8 129 aa17.33■□□□□ 0.36
RNF40-205ENST00000563909 HDDC3Q8N4P3 179 aa17.33■□□□□ 0.36
RNF40-205ENST00000563909 ZMAT2Q96NC0 199 aaKnown RBP17.33■□□□□ 0.36
RNF40-205ENST00000563909 CCDC113Q9H0I3 377 aa17.33■□□□□ 0.36
RNF40-205ENST00000563909 TMEM74BQ9NUR3 256 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms