RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 CDK13Q14004 1512 aaKnown RBP5.09□□□□□ -1.59
SMG1-207ENST00000563235 GOLGA8AA7E2F4 631 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 GOLGA8BA8MQT2 603 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 DCDC2CA8MYV0 355 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 H3BML4 177 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 KRIT1O00522 736 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 IFIT3O14879 490 aaKnown RBP5.09□□□□□ -1.6
SMG1-207ENST00000563235 HDAC3O15379 428 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 ARHGAP6O43182 974 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 NR2F1P10589 423 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 PABPC1P11940 636 aaKnown RBP5.09□□□□□ -1.6
SMG1-207ENST00000563235 CASTP20810 708 aaKnown RBP5.09□□□□□ -1.6
SMG1-207ENST00000563235 CHMP24386 653 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 THPOP40225 353 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 ARHGDIBP52566 201 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 FAM189BP81408 668 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 EFTUD2Q15029 972 aaKnown RBP eCLIP5.09□□□□□ -1.64e-6■■■■□ 25.8
SMG1-207ENST00000563235 TRIP4Q15650 581 aaPredicted RBP5.09□□□□□ -1.6
SMG1-207ENST00000563235 LETM2Q2VYF4 491 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 HFEQ30201 348 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 CFAP221Q4G0U5 840 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 RRAGBQ5VZM2 374 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 ACAD10Q6JQN1 1059 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 BLOC1S3Q6QNY0 202 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 TXNRD3Q86VQ6 643 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 SFRP1Q8N474 314 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 ZNF565Q8N9K5 539 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 SNX29Q8TEQ0 813 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 INTS12Q96CB8 462 aaKnown RBP5.09□□□□□ -1.6
SMG1-207ENST00000563235 ABHD17AQ96GS6 310 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 ERP44Q9BS26 406 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 AARSD1Q9BTE6 412 aaKnown RBP5.09□□□□□ -1.6
SMG1-207ENST00000563235 TSGA10Q9BZW7 698 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 CHRDQ9H2X0 955 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 PRDM13Q9H4Q3 707 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 PARVGQ9HBI0 331 aa5.09□□□□□ -1.6
SMG1-207ENST00000563235 WDR6Q9NNW5 1121 aaKnown RBP5.09□□□□□ -1.6
SMG1-207ENST00000563235 POLR3KQ9Y2Y1 108 aaPredicted RBP5.09□□□□□ -1.6
SMG1-207ENST00000563235 IBTKQ9P2D0 1353 aaPredicted RBP5.08□□□□□ -1.6
SMG1-207ENST00000563235 MYO3BQ8WXR4 1341 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 CTTNBP2Q8WZ74 1663 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 LCHNA4D1U4 455 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 EME2A4GXA9 379 aaPredicted RBP5.08□□□□□ -1.6
SMG1-207ENST00000563235 GPR89AB7ZAQ6 455 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 L7N2F9 121 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 RANBP6O60518 1105 aaKnown RBP5.08□□□□□ -1.6
SMG1-207ENST00000563235 FTCDO95954 541 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 GPR89BP0CG08 455 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 TPBGLP0DKB5 382 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 RLBP1P12271 317 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 PCSK2P16519 638 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 CCNA2P20248 432 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 PDCP20941 246 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 AKT1P31749 480 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 SERPINF1P36955 418 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 AMPHP49418 695 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 MPP2Q14168 576 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 TBCCQ15814 346 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 R3HCC1LQ7Z5L2 792 aaKnown RBP5.08□□□□□ -1.6
SMG1-207ENST00000563235 PRPF39Q86UA1 669 aaKnown RBP5.08□□□□□ -1.6
SMG1-207ENST00000563235 P3H2Q8IVL5 708 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 TTC5Q8N0Z6 440 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 BANPQ8N9N5 519 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 STT3BQ8TCJ2 826 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 ZDHHC16Q969W1 377 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 ZNF566Q969W8 418 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 ARL5BQ96KC2 179 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 MPHOSPH9Q99550 1183 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 USP44Q9H0E7 712 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 SEMA6BQ9H3T3 888 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 SYNDIG1Q9H7V2 258 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 COPS7BQ9H9Q2 264 aaPredicted RBP5.08□□□□□ -1.6
SMG1-207ENST00000563235 PLA2G2EQ9NZK7 142 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 AURKCQ9UQB9 309 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 PIN4Q9Y237 131 aaKnown RBP5.08□□□□□ -1.6
SMG1-207ENST00000563235 TIMM22Q9Y584 194 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 PCDHGA1Q9Y5H4 931 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.08□□□□□ -1.6
SMG1-207ENST00000563235 MYO3AQ8NEV4 1616 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 FRMD3A2A2Y4 597 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 EBAG9O00559 213 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 ADAM20O43506 726 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 HRO43593 1189 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 NOL3O60936 208 aaKnown RBP5.08□□□□□ -1.6
SMG1-207ENST00000563235 ULK1O75385 1050 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 ZNF189O75820 626 aaPredicted RBP5.08□□□□□ -1.6
SMG1-207ENST00000563235 GCNT3O95395 438 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 PRAMEF12O95522 483 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 S100A9P06702 114 aaKnown RBP5.08□□□□□ -1.6
SMG1-207ENST00000563235 C5AR1P21730 350 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 EVI2BP34910 448 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 ABCG1P45844 678 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 PITPNBP48739 271 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 SUMO1P63165 101 aaKnown RBP5.08□□□□□ -1.6
SMG1-207ENST00000563235 GSTO1P78417 241 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 YWHAHQ04917 246 aaPredicted RBP5.08□□□□□ -1.6
SMG1-207ENST00000563235 PPIDQ08752 370 aaKnown RBP5.08□□□□□ -1.6
SMG1-207ENST00000563235 TRIM32Q13049 653 aa5.08□□□□□ -1.6
SMG1-207ENST00000563235 TRIM25Q14258 630 aaKnown RBP5.08□□□□□ -1.6
SMG1-207ENST00000563235 CNGA2Q16280 664 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms