RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 KRT19P08727 400 aa18.15■□□□□ 0.5
CLK3-210ENST00000563112 EPHA5P54756 1037 aa18.15■□□□□ 0.5
CLK3-210ENST00000563112 WNT7BP56706 349 aa18.15■□□□□ 0.5
CLK3-210ENST00000563112 SNRPFP62306 86 aaKnown RBP18.15■□□□□ 0.5
CLK3-210ENST00000563112 KRT85P78386 507 aa18.15■□□□□ 0.5
CLK3-210ENST00000563112 RBP5P82980 135 aa18.15■□□□□ 0.5
CLK3-210ENST00000563112 SLC39A12Q504Y0 691 aa18.15■□□□□ 0.5
CLK3-210ENST00000563112 PHLDB3Q6NSJ2 640 aa18.15■□□□□ 0.5
CLK3-210ENST00000563112 HS2ST1Q7LGA3 356 aa18.15■□□□□ 0.5
CLK3-210ENST00000563112 ITIH5Q86UX2 942 aa18.15■□□□□ 0.5
CLK3-210ENST00000563112 LRRC52Q8N7C0 313 aa18.15■□□□□ 0.5
CLK3-210ENST00000563112 C1orf127Q8N9H9 656 aa18.15■□□□□ 0.5
CLK3-210ENST00000563112 OR10T2Q8NGX3 314 aa18.15■□□□□ 0.5
CLK3-210ENST00000563112 C2orf15Q8WU43 125 aaKnown RBP18.15■□□□□ 0.5
CLK3-210ENST00000563112 ELSPBP1Q96BH3 223 aa18.15■□□□□ 0.5
CLK3-210ENST00000563112 BORCS6Q96GS4 357 aa18.15■□□□□ 0.5
CLK3-210ENST00000563112 SPATA32Q96LK8 384 aa18.15■□□□□ 0.5
CLK3-210ENST00000563112 TMEM209Q96SK2 561 aa18.15■□□□□ 0.5
CLK3-210ENST00000563112 GPR88Q9GZN0 384 aa18.15■□□□□ 0.5
CLK3-210ENST00000563112 ZFP14Q9HCL3 533 aa18.15■□□□□ 0.5
CLK3-210ENST00000563112 HSPBP1Q9NZL4 362 aa18.15■□□□□ 0.5
CLK3-210ENST00000563112 ATP6V1DQ9Y5K8 247 aa18.15■□□□□ 0.5
CLK3-210ENST00000563112 H0Y858 1186 aa18.14■□□□□ 0.49
CLK3-210ENST00000563112 FGF19O95750 216 aa18.14■□□□□ 0.49
CLK3-210ENST00000563112 TNNC2P02585 160 aa18.14■□□□□ 0.49
CLK3-210ENST00000563112 SLFN14P0C7P3 912 aa18.14■□□□□ 0.49
CLK3-210ENST00000563112 CCR2P41597 374 aa18.14■□□□□ 0.49
CLK3-210ENST00000563112 MRE11P49959 708 aa18.14■□□□□ 0.49
CLK3-210ENST00000563112 TSPY1Q01534 308 aa18.14■□□□□ 0.49
CLK3-210ENST00000563112 BFSP1Q12934 665 aa18.14■□□□□ 0.49
CLK3-210ENST00000563112 VEPH1Q14D04 833 aa18.14■□□□□ 0.49
CLK3-210ENST00000563112 DUOXA2Q1HG44 320 aa18.14■□□□□ 0.49
CLK3-210ENST00000563112 FAM200AQ8TCP9 573 aa18.14■□□□□ 0.49
CLK3-210ENST00000563112 CRISPLD1Q9H336 500 aa18.14■□□□□ 0.49
CLK3-210ENST00000563112 SLITRK6Q9H5Y7 841 aa18.14■□□□□ 0.49
CLK3-210ENST00000563112 INTS13Q9NVM9 706 aa18.14■□□□□ 0.49
CLK3-210ENST00000563112 SERTAD1Q9UHV2 236 aa18.14■□□□□ 0.49
CLK3-210ENST00000563112 CMA1P23946 247 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 CASP1P29466 404 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 HOXD13P35453 343 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 MYL7Q01449 175 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 PRKCQQ04759 706 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 EHHADHQ08426 723 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 MYO1EQ12965 1108 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 SNW1Q13573 536 aaKnown RBP18.13■□□□□ 0.49
CLK3-210ENST00000563112 CUL4BQ13620 913 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 TAF12Q16514 161 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 MGAT5BQ3V5L5 792 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 SLC44A4Q53GD3 710 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 FAM78AQ5JUQ0 283 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 TANGO2Q6ICL3 276 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 CBWD2Q8IUF1 395 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 NELFCDQ8IXH7 590 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 CCDC105Q8IYK2 499 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 TMEM86AQ8N2M4 240 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 DTWD2Q8NBA8 298 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 SPPL2BQ8TCT7 592 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 LEO1Q8WVC0 666 aaPredicted RBP18.13■□□□□ 0.49
CLK3-210ENST00000563112 SCFD1Q8WVM8 642 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 SMARCD2Q92925 531 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 SEPT5Q99719 369 aaPredicted RBP18.13■□□□□ 0.49
CLK3-210ENST00000563112 MTMR12Q9C0I1 747 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 SLC39A2Q9NP94 309 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 AGPAT3Q9NRZ7 376 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 CGNQ9P2M7 1197 aaKnown RBP18.13■□□□□ 0.49
CLK3-210ENST00000563112 USP25Q9UHP3 1055 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 SIT1Q9Y3P8 196 aa18.13■□□□□ 0.49
CLK3-210ENST00000563112 TSC2P49815 1807 aa18.12■□□□□ 0.49
CLK3-210ENST00000563112 GJA1P17302 382 aa18.12■□□□□ 0.49
CLK3-210ENST00000563112 STARD6P59095 220 aa18.12■□□□□ 0.49
CLK3-210ENST00000563112 MLF2Q15773 248 aaPredicted RBP18.12■□□□□ 0.49
CLK3-210ENST00000563112 SNRNP35Q16560 246 aaKnown RBP18.12■□□□□ 0.49
CLK3-210ENST00000563112 DNAJB7Q7Z6W7 309 aaPredicted RBP18.12■□□□□ 0.49
CLK3-210ENST00000563112 XXYLT1Q8NBI6 393 aa18.12■□□□□ 0.49
CLK3-210ENST00000563112 RDH13Q8NBN7 331 aa18.12■□□□□ 0.49
CLK3-210ENST00000563112 PSMG2Q969U7 264 aa18.12■□□□□ 0.49
CLK3-210ENST00000563112 E2F7Q96AV8 911 aa18.12■□□□□ 0.49
CLK3-210ENST00000563112 ASB16Q96NS5 453 aa18.12■□□□□ 0.49
CLK3-210ENST00000563112 PLA2G2FQ9BZM2 168 aa18.12■□□□□ 0.49
CLK3-210ENST00000563112 DNAJC25Q9H1X3 360 aa18.12■□□□□ 0.49
CLK3-210ENST00000563112 GDAP2Q9NXN4 497 aa18.12■□□□□ 0.49
CLK3-210ENST00000563112 PCDHB5Q9Y5E4 795 aa18.12■□□□□ 0.49
CLK3-210ENST00000563112 SNX9Q9Y5X1 595 aa18.12■□□□□ 0.49
CLK3-210ENST00000563112 A0A1B0GVL5 298 aa18.11■□□□□ 0.49
CLK3-210ENST00000563112 A0A1W2PRU2 124 aa18.11■□□□□ 0.49
CLK3-210ENST00000563112 CLIC2O15247 247 aa18.11■□□□□ 0.49
CLK3-210ENST00000563112 TGFB1I1O43294 461 aa18.11■□□□□ 0.49
CLK3-210ENST00000563112 PRPF40AO75400 957 aaKnown RBP18.11■□□□□ 0.49
CLK3-210ENST00000563112 MOSPD3O75425 235 aa18.11■□□□□ 0.49
CLK3-210ENST00000563112 SOAT2O75908 522 aa18.11■□□□□ 0.49
CLK3-210ENST00000563112 PFKFB1P16118 471 aa18.11■□□□□ 0.49
CLK3-210ENST00000563112 CYP2J2P51589 502 aa18.11■□□□□ 0.49
CLK3-210ENST00000563112 TEAD2Q15562 447 aa18.11■□□□□ 0.49
CLK3-210ENST00000563112 NFE2Q16621 373 aaPredicted RBP18.11■□□□□ 0.49
CLK3-210ENST00000563112 BMT2Q1RMZ1 405 aa18.11■□□□□ 0.49
CLK3-210ENST00000563112 ARHGAP15Q53QZ3 475 aa18.11■□□□□ 0.49
CLK3-210ENST00000563112 LMBRD2Q68DH5 695 aaPredicted RBP18.11■□□□□ 0.49
CLK3-210ENST00000563112 POTEHQ6S545 545 aa18.11■□□□□ 0.49
CLK3-210ENST00000563112 LRRTM3Q86VH5 581 aa18.11■□□□□ 0.49
CLK3-210ENST00000563112 WDR49Q8IV35 697 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms