RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 SNRPA1P09661 255 aaKnown RBP4.58□□□□□ -1.68
HERC1-215ENST00000561436 ALAS1P13196 640 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 TYRP14679 529 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 ATP5JP18859 108 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 MALP21145 153 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 PEX2P28328 305 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 GUCY1A2P33402 732 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 FXR1P51114 621 aaKnown RBP eCLIP4.58□□□□□ -1.68
HERC1-215ENST00000561436 RABGGTBP53611 331 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 RAB1AP62820 205 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 GNAI1P63096 354 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 TLE1Q04724 770 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 KLF10Q13118 480 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 IFIT5Q13325 482 aaKnown RBP4.58□□□□□ -1.68
HERC1-215ENST00000561436 CNN3Q15417 329 aaKnown RBP4.58□□□□□ -1.68
HERC1-215ENST00000561436 CSRP2Q16527 193 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 FAM47AQ5JRC9 791 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 SYCP2LQ5T4T6 812 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 MAEAQ7L5Y9 396 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 ACRBPQ8NEB7 543 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 IFI44Q8TCB0 444 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 RAB24Q969Q5 203 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 ZNF503Q96F45 646 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 BORCS6Q96GS4 357 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 MRGPRX4Q96LA9 322 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 RPS6KC1Q96S38 1066 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 VRK1Q99986 396 aaPredicted RBP4.58□□□□□ -1.68
HERC1-215ENST00000561436 POLR3GLQ9BT43 218 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 LSM14BQ9BX40 385 aaKnown RBP4.58□□□□□ -1.68
HERC1-215ENST00000561436 PACSIN1Q9BY11 444 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 LRRC27Q9C0I9 530 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 ENKD1Q9H0I2 346 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 C11orf54Q9H0W9 315 aaPredicted RBP4.58□□□□□ -1.68
HERC1-215ENST00000561436 NUP62CLQ9H1M0 184 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 CEP72Q9P209 647 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 L1RE1Q9UN81 338 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 PCDHA3Q9Y5H8 950 aa4.58□□□□□ -1.68
HERC1-215ENST00000561436 ATRNO75882 1429 aa4.57□□□□□ -1.68
HERC1-215ENST00000561436 BLMP54132 1417 aaPredicted RBP4.57□□□□□ -1.68
HERC1-215ENST00000561436 ADGRL3Q9HAR2 1447 aa4.57□□□□□ -1.68
HERC1-215ENST00000561436 KLRG2A4D1S0 409 aaPredicted RBP4.57□□□□□ -1.68
HERC1-215ENST00000561436 PMM2O15305 246 aa4.57□□□□□ -1.68
HERC1-215ENST00000561436 HOXA3O43365 443 aaPredicted RBP4.57□□□□□ -1.68
HERC1-215ENST00000561436 IPO13O94829 963 aaKnown RBP4.57□□□□□ -1.68
HERC1-215ENST00000561436 SLPIP03973 132 aa4.57□□□□□ -1.68
HERC1-215ENST00000561436 CD1AP06126 327 aa4.57□□□□□ -1.68
HERC1-215ENST00000561436 RPL17P18621 184 aaKnown RBP4.57□□□□□ -1.68
HERC1-215ENST00000561436 GNAT2P19087 354 aa4.57□□□□□ -1.68
HERC1-215ENST00000561436 MRPL49Q13405 166 aaKnown RBP4.57□□□□□ -1.68
HERC1-215ENST00000561436 MTM1Q13496 603 aa4.57□□□□□ -1.68
HERC1-215ENST00000561436 CNGB1Q14028 1251 aaPredicted RBP4.57□□□□□ -1.68
HERC1-215ENST00000561436 AFMIDQ63HM1 303 aa4.57□□□□□ -1.68
HERC1-215ENST00000561436 IL31Q6EBC2 164 aa4.57□□□□□ -1.68
HERC1-215ENST00000561436 UNC5CLQ8IV45 518 aa4.57□□□□□ -1.68
HERC1-215ENST00000561436 SH2D3CQ8N5H7 860 aa4.57□□□□□ -1.68
HERC1-215ENST00000561436 RNF169Q8NCN4 708 aa4.57□□□□□ -1.68
HERC1-215ENST00000561436 NLGN4YQ8NFZ3 816 aaPredicted RBP4.57□□□□□ -1.68
HERC1-215ENST00000561436 MORC4Q8TE76 937 aa4.57□□□□□ -1.68
HERC1-215ENST00000561436 MIEF2Q96C03 454 aa4.57□□□□□ -1.68
HERC1-215ENST00000561436 CEP95Q96GE4 821 aa4.57□□□□□ -1.68
HERC1-215ENST00000561436 CPPED1Q9BRF8 314 aaPredicted RBP4.57□□□□□ -1.68
HERC1-215ENST00000561436 KRTAP4-5Q9BYR2 181 aa4.57□□□□□ -1.68
HERC1-215ENST00000561436 ARMT1Q9H993 441 aa4.57□□□□□ -1.68
HERC1-215ENST00000561436 SIDT1Q9NXL6 827 aaKnown RBP4.57□□□□□ -1.68
HERC1-215ENST00000561436 TPCN1Q9ULQ1 816 aa4.57□□□□□ -1.68
HERC1-215ENST00000561436 RUVBL1Q9Y265 456 aaKnown RBP4.57□□□□□ -1.68
HERC1-215ENST00000561436 ACTL7AQ9Y615 435 aa4.57□□□□□ -1.68
HERC1-215ENST00000561436 UBR1Q8IWV7 1749 aa4.57□□□□□ -1.68
HERC1-215ENST00000561436 PTPN23Q9H3S7 1636 aa4.57□□□□□ -1.68
HERC1-215ENST00000561436 TRPM2O94759 1503 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 ASXL1Q8IXJ9 1541 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 C1orf167Q5SNV9 1468 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 HFM1A2PYH4 1435 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 NUP155O75694 1391 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 LRRC14BA6NHZ5 514 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 PRR5-ARHGAP8B1AHC4 643 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 APAF1O14727 1248 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 PJA2O43164 708 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 FRS3O43559 492 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 AMY1AP04745 511 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 ALOX15P16050 662 aaPredicted RBP4.56□□□□□ -1.68
HERC1-215ENST00000561436 MAN2A2P49641 1150 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 NEK3P51956 506 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 AK2P54819 239 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 SEMA5AQ13591 1074 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 LSM12Q3MHD2 195 aaKnown RBP4.56□□□□□ -1.68
HERC1-215ENST00000561436 LONRF3Q496Y0 759 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 FLYWCH1Q4VC44 716 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 PABPC1LQ4VXU2 614 aaKnown RBP4.56□□□□□ -1.68
HERC1-215ENST00000561436 GORABQ5T7V8 394 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 FNDC7Q5VTL7 733 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 OTUD7BQ6GQQ9 843 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 PLXDC1Q8IUK5 500 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 GSPT2Q8IYD1 628 aaKnown RBP4.56□□□□□ -1.68
HERC1-215ENST00000561436 ZGPATQ8N5A5 531 aaKnown RBP4.56□□□□□ -1.68
HERC1-215ENST00000561436 ZFP28Q8NHY6 868 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 CACTINQ8WUQ7 758 aaKnown RBP4.56□□□□□ -1.68
HERC1-215ENST00000561436 STON2Q8WXE9 905 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 ST8SIA2Q92186 375 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 SUCLG2Q96I99 432 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms