RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 PYM1Q9BRP8 204 aaKnown RBP17.53■□□□□ 0.4
SNX1-213ENST00000561026 FAM213AQ9BRX8 229 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 ZCWPW1Q9H0M4 648 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 SLITRK6Q9H5Y7 841 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 ZNF334Q9HCZ1 680 aaPredicted RBP17.53■□□□□ 0.4
SNX1-213ENST00000561026 FOXD4L1Q9NU39 408 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 FBXO4Q9UKT5 387 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 PCDHB13Q9Y5F0 798 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 FRYLO94915 3013 aa17.53■□□□□ 0.4
SNX1-213ENST00000561026 ZNF292O60281 2723 aa17.52■□□□□ 0.4
SNX1-213ENST00000561026 FRMD3A2A2Y4 597 aa17.52■□□□□ 0.39
SNX1-213ENST00000561026 KPNA7A9QM74 516 aa17.52■□□□□ 0.39
SNX1-213ENST00000561026 MAN2B1O00754 1011 aa17.52■□□□□ 0.39
SNX1-213ENST00000561026 STX6O43752 255 aa17.52■□□□□ 0.39
SNX1-213ENST00000561026 SOAT2O75908 522 aa17.52■□□□□ 0.39
SNX1-213ENST00000561026 TUFMP49411 452 aaKnown RBP17.52■□□□□ 0.39
SNX1-213ENST00000561026 ZNF528Q3MIS6 628 aa17.52■□□□□ 0.39
SNX1-213ENST00000561026 SLC39A12Q504Y0 691 aa17.52■□□□□ 0.39
SNX1-213ENST00000561026 WSCD1Q658N2 575 aa17.52■□□□□ 0.39
SNX1-213ENST00000561026 GAREM2Q75VX8 874 aa17.52■□□□□ 0.39
SNX1-213ENST00000561026 ITIH5Q86UX2 942 aa17.52■□□□□ 0.39
SNX1-213ENST00000561026 ZNF687Q8N1G0 1237 aa17.52■□□□□ 0.39
SNX1-213ENST00000561026 THEM5Q8N1Q8 247 aa17.52■□□□□ 0.39
SNX1-213ENST00000561026 E2F7Q96AV8 911 aa17.52■□□□□ 0.39
SNX1-213ENST00000561026 MIA3Q5JRA6 1907 aa17.52■□□□□ 0.39
SNX1-213ENST00000561026 SCN1AP35498 2009 aa17.51■□□□□ 0.39
SNX1-213ENST00000561026 HEPACAM2A8MVW5 462 aa17.51■□□□□ 0.39
SNX1-213ENST00000561026 K7ELQ4 463 aaPredicted RBP17.51■□□□□ 0.39
SNX1-213ENST00000561026 ZNF263O14978 683 aa17.51■□□□□ 0.39
SNX1-213ENST00000561026 FGF19O95750 216 aa17.51■□□□□ 0.39
SNX1-213ENST00000561026 NASPP49321 788 aaPredicted RBP17.51■□□□□ 0.39
SNX1-213ENST00000561026 WNT7BP56706 349 aa17.51■□□□□ 0.39
SNX1-213ENST00000561026 ALCAMQ13740 583 aa17.51■□□□□ 0.39
SNX1-213ENST00000561026 LRRTM3Q86VH5 581 aa17.51■□□□□ 0.39
SNX1-213ENST00000561026 SYCP3Q8IZU3 236 aa17.51■□□□□ 0.39
SNX1-213ENST00000561026 ZSWIM2Q8NEG5 633 aa17.51■□□□□ 0.39
SNX1-213ENST00000561026 FGFBP2Q9BYJ0 223 aa17.51■□□□□ 0.39
SNX1-213ENST00000561026 PANK4Q9NVE7 773 aa17.51■□□□□ 0.39
SNX1-213ENST00000561026 NCANO14594 1321 aa17.51■□□□□ 0.39
SNX1-213ENST00000561026 ANK1P16157 1881 aa17.5■□□□□ 0.39
SNX1-213ENST00000561026 ARNTLO00327 626 aa17.5■□□□□ 0.39
SNX1-213ENST00000561026 LDHAP00338 332 aaKnown RBP17.5■□□□□ 0.39
SNX1-213ENST00000561026 GARTP22102 1010 aa17.5■□□□□ 0.39
SNX1-213ENST00000561026 PNPLA4P41247 253 aa17.5■□□□□ 0.39
SNX1-213ENST00000561026 CDR1P51861 262 aa17.5■□□□□ 0.39
SNX1-213ENST00000561026 CSTF1Q05048 431 aaKnown RBP17.5■□□□□ 0.39
SNX1-213ENST00000561026 SMARCB1Q12824 385 aa17.5■□□□□ 0.39
SNX1-213ENST00000561026 MGAT5BQ3V5L5 792 aa17.5■□□□□ 0.39
SNX1-213ENST00000561026 SV2CQ496J9 727 aa17.5■□□□□ 0.39
SNX1-213ENST00000561026 STXBP5Q5T5C0 1151 aa17.5■□□□□ 0.39
SNX1-213ENST00000561026 ARID3BQ8IVW6 561 aaPredicted RBP17.5■□□□□ 0.39
SNX1-213ENST00000561026 BRSK2Q8IWQ3 736 aa17.5■□□□□ 0.39
SNX1-213ENST00000561026 PDILTQ8N807 584 aa17.5■□□□□ 0.39
SNX1-213ENST00000561026 LINC00301Q8NCQ3 95 aa17.5■□□□□ 0.39
SNX1-213ENST00000561026 C2orf15Q8WU43 125 aaKnown RBP17.5■□□□□ 0.39
SNX1-213ENST00000561026 RSPRY1Q96DX4 576 aa17.5■□□□□ 0.39
SNX1-213ENST00000561026 SAAL1Q96ER3 474 aa17.5■□□□□ 0.39
SNX1-213ENST00000561026 DCHS1Q96JQ0 3298 aa17.5■□□□□ 0.39
SNX1-213ENST00000561026 ZNF560Q96MR9 790 aa17.5■□□□□ 0.39
SNX1-213ENST00000561026 SEPT5Q99719 369 aaPredicted RBP17.5■□□□□ 0.39
SNX1-213ENST00000561026 MKNK1Q9BUB5 465 aa17.5■□□□□ 0.39
SNX1-213ENST00000561026 ATXN3LQ9H3M9 355 aa17.5■□□□□ 0.39
SNX1-213ENST00000561026 TULP1O00294 542 aaPredicted RBP17.49■□□□□ 0.39
SNX1-213ENST00000561026 ATF6P18850 670 aa17.49■□□□□ 0.39
SNX1-213ENST00000561026 GABRR2P28476 465 aa17.49■□□□□ 0.39
SNX1-213ENST00000561026 TFAMQ00059 246 aaKnown RBP17.49■□□□□ 0.39
SNX1-213ENST00000561026 FCHO2Q0JRZ9 810 aa17.49■□□□□ 0.39
SNX1-213ENST00000561026 CACTINQ8WUQ7 758 aaKnown RBP17.49■□□□□ 0.39
SNX1-213ENST00000561026 FAM3CQ92520 227 aa17.49■□□□□ 0.39
SNX1-213ENST00000561026 LPIN3Q9BQK8 851 aa17.49■□□□□ 0.39
SNX1-213ENST00000561026 CBWD1Q9BRT8 395 aa17.49■□□□□ 0.39
SNX1-213ENST00000561026 TMEM206Q9H813 350 aa17.49■□□□□ 0.39
SNX1-213ENST00000561026 RBAKQ9NYW8 714 aaPredicted RBP17.49■□□□□ 0.39
SNX1-213ENST00000561026 NDRG2Q9UN36 371 aaKnown RBP17.49■□□□□ 0.39
SNX1-213ENST00000561026 PIAS3Q9Y6X2 628 aa17.49■□□□□ 0.39
SNX1-213ENST00000561026 OTOGLQ3ZCN5 2332 aa17.48■□□□□ 0.39
SNX1-213ENST00000561026 GOLGA8IPA6NC78 632 aa17.48■□□□□ 0.39
SNX1-213ENST00000561026 GOLGA8JA6NMD2 632 aa17.48■□□□□ 0.39
SNX1-213ENST00000561026 CHADO15335 359 aa17.48■□□□□ 0.39
SNX1-213ENST00000561026 EXTL3O43909 919 aa17.48■□□□□ 0.39
SNX1-213ENST00000561026 PRPF6O94906 941 aaKnown RBP17.48■□□□□ 0.39
SNX1-213ENST00000561026 HAPLN1P10915 354 aaPredicted RBP17.48■□□□□ 0.39
SNX1-213ENST00000561026 MLLT6P55198 1093 aaPredicted RBP17.48■□□□□ 0.39
SNX1-213ENST00000561026 MTAPQ13126 283 aa17.48■□□□□ 0.39
SNX1-213ENST00000561026 VEPH1Q14D04 833 aa17.48■□□□□ 0.39
SNX1-213ENST00000561026 STK38Q15208 465 aa17.48■□□□□ 0.39
SNX1-213ENST00000561026 GPIHBP1Q8IV16 184 aa17.48■□□□□ 0.39
SNX1-213ENST00000561026 CCDC65Q8IXS2 484 aa17.48■□□□□ 0.39
SNX1-213ENST00000561026 YAF2Q8IY57 180 aa17.48■□□□□ 0.39
SNX1-213ENST00000561026 DCP1BQ8IZD4 617 aaKnown RBP17.48■□□□□ 0.39
SNX1-213ENST00000561026 C1orf127Q8N9H9 656 aa17.48■□□□□ 0.39
SNX1-213ENST00000561026 FAM200AQ8TCP9 573 aa17.48■□□□□ 0.39
SNX1-213ENST00000561026 SPPL2BQ8TCT7 592 aa17.48■□□□□ 0.39
SNX1-213ENST00000561026 AGAP1Q9UPQ3 857 aa17.48■□□□□ 0.39
SNX1-213ENST00000561026 GPR179Q6PRD1 2367 aa17.48■□□□□ 0.39
SNX1-213ENST00000561026 TSC2P49815 1807 aa17.47■□□□□ 0.39
SNX1-213ENST00000561026 SPTLC2O15270 562 aa17.47■□□□□ 0.39
SNX1-213ENST00000561026 KINO60870 393 aaKnown RBP17.47■□□□□ 0.39
SNX1-213ENST00000561026 ITGB3P05106 788 aa17.47■□□□□ 0.39
SNX1-213ENST00000561026 WEE1P30291 646 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms