RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 CDC25CP30307 473 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 MCM4P33991 863 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 AVPR1AP37288 418 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 PTGER3P43115 390 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 YARSP54577 528 aaKnown RBP10.46□□□□□ -0.73
HERC1-210ENST00000560897 NBR1Q14596 966 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 TAF12Q16514 161 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 CD300LGQ6UXG3 332 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 NAXDQ8IW45 347 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 MDGA1Q8NFP4 955 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 ETNPPLQ8TBG4 499 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 CHFRQ96EP1 664 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 TBC1D32Q96NH3 1257 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 PGLYRP2Q96PD5 576 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 FAM83CQ9BQN1 747 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 POLR3CQ9BUI4 534 aaPredicted RBP10.46□□□□□ -0.73
HERC1-210ENST00000560897 LRRC3Q9BY71 257 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 SMG9Q9H0W8 520 aaKnown RBP10.46□□□□□ -0.73
HERC1-210ENST00000560897 C2orf40Q9H1Z8 148 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 CXCL16Q9H2A7 254 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 XPNPEP1Q9NQW7 623 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 WRAP73Q9P2S5 460 aaPredicted RBP10.46□□□□□ -0.73
HERC1-210ENST00000560897 ZMYM5Q9UJ78 669 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 PILRBQ9UKJ0 227 aa10.46□□□□□ -0.73
HERC1-210ENST00000560897 MYO16Q9Y6X6 1858 aa10.46□□□□□ -0.74
HERC1-210ENST00000560897 KIAA1549LQ6ZVL6 1849 aa10.45□□□□□ -0.74
HERC1-210ENST00000560897 CYP3A7-CYP3A51PA0A087WV96 503 aa10.45□□□□□ -0.74
HERC1-210ENST00000560897 KLF18A0A0U1RQI7 1052 aa10.45□□□□□ -0.74
HERC1-210ENST00000560897 AP5Z1O43299 807 aa10.45□□□□□ -0.74
HERC1-210ENST00000560897 ITPKAP23677 461 aa10.45□□□□□ -0.74
HERC1-210ENST00000560897 CYP3A7P24462 503 aa10.45□□□□□ -0.74
HERC1-210ENST00000560897 ARL2P36404 184 aa10.45□□□□□ -0.74
HERC1-210ENST00000560897 CYP4F8P98187 520 aa10.45□□□□□ -0.74
HERC1-210ENST00000560897 MRPL58Q14197 206 aaKnown RBP10.45□□□□□ -0.74
HERC1-210ENST00000560897 VEPH1Q14D04 833 aa10.45□□□□□ -0.74
HERC1-210ENST00000560897 PDGFRLQ15198 375 aa10.45□□□□□ -0.74
HERC1-210ENST00000560897 EPHA7Q15375 998 aa10.45□□□□□ -0.74
HERC1-210ENST00000560897 GAREM2Q75VX8 874 aa10.45□□□□□ -0.74
HERC1-210ENST00000560897 TMPRSS7Q7RTY8 843 aa10.45□□□□□ -0.74
HERC1-210ENST00000560897 DNAJB7Q7Z6W7 309 aaPredicted RBP10.45□□□□□ -0.74
HERC1-210ENST00000560897 GALNT15Q8N3T1 639 aa10.45□□□□□ -0.74
HERC1-210ENST00000560897 RLN3Q8WXF3 142 aa10.45□□□□□ -0.74
HERC1-210ENST00000560897 PSMG2Q969U7 264 aa10.45□□□□□ -0.74
HERC1-210ENST00000560897 FCRL3Q96P31 734 aaPredicted RBP10.45□□□□□ -0.74
HERC1-210ENST00000560897 DNAJC25Q9H1X3 360 aa10.45□□□□□ -0.74
HERC1-210ENST00000560897 KIF9Q9HAQ2 790 aa10.45□□□□□ -0.74
HERC1-210ENST00000560897 FBRSL1Q9HCM7 1045 aaKnown RBP10.45□□□□□ -0.74
HERC1-210ENST00000560897 TOPORSQ9NS56 1045 aaPredicted RBP10.45□□□□□ -0.74
HERC1-210ENST00000560897 DNAAF2Q9NVR5 837 aaKnown RBP10.45□□□□□ -0.74
HERC1-210ENST00000560897 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.44□□□□□ -0.74
HERC1-210ENST00000560897 TRABD2BA6NFA1 517 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 OTOL1A6NHN0 477 aaPredicted RBP10.44□□□□□ -0.74
HERC1-210ENST00000560897 SGSM2O43147 1006 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 ARSAP15289 507 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 CHMLP26374 656 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 CDC27P30260 824 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 GJA4P35212 333 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 P2RY2P41231 377 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 RCAN1P53805 252 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 SEC13P55735 322 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 NLRP5P59047 1200 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 NUCB1Q02818 461 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 RPL6Q02878 288 aaKnown RBP10.44□□□□□ -0.74
HERC1-210ENST00000560897 YWHAHQ04917 246 aaPredicted RBP10.44□□□□□ -0.74
HERC1-210ENST00000560897 DUSP4Q13115 394 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 NR1H3Q13133 447 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 CTTNQ14247 550 aaKnown RBP10.44□□□□□ -0.74
HERC1-210ENST00000560897 FAM187BQ17R55 369 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 C2orf27AQ580R0 203 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 PEAR1Q5VY43 1037 aaPredicted RBP10.44□□□□□ -0.74
HERC1-210ENST00000560897 NCAPH2Q6IBW4 605 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 MOXD1Q6UVY6 613 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 TPH2Q8IWU9 490 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 CMTM8Q8IZV2 173 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 PGBD3Q8N328 593 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 DAGLBQ8NCG7 672 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 OR2I1PQ8NGU4 316 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 DDX12PQ92771 950 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 DYDC2Q96IM9 177 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 FAM20AQ96MK3 541 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 FNBP1Q96RU3 617 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 ARID3AQ99856 593 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 OXCT2Q9BYC2 517 aaPredicted RBP10.44□□□□□ -0.74
HERC1-210ENST00000560897 RWDD1Q9H446 243 aaPredicted RBP10.44□□□□□ -0.74
HERC1-210ENST00000560897 CAPN10Q9HC96 672 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 RGL1Q9NZL6 768 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 VAV3Q9UKW4 847 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 MMP17Q9ULZ9 603 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 CEP192Q8TEP8 1941 aa10.44□□□□□ -0.74
HERC1-210ENST00000560897 SMIM28A0A1B0GU29 152 aa10.43□□□□□ -0.74
HERC1-210ENST00000560897 TEX51A0A1B0GUA7 166 aa10.43□□□□□ -0.74
HERC1-210ENST00000560897 SLC27A2O14975 620 aa10.43□□□□□ -0.74
HERC1-210ENST00000560897 RRP8O43159 456 aaKnown RBP10.43□□□□□ -0.74
HERC1-210ENST00000560897 PRPF3O43395 683 aaKnown RBP10.43□□□□□ -0.74
HERC1-210ENST00000560897 EDIL3O43854 480 aa10.43□□□□□ -0.74
HERC1-210ENST00000560897 NTRK1P04629 796 aa10.43□□□□□ -0.74
HERC1-210ENST00000560897 RPL9P32969 192 aaKnown RBP10.43□□□□□ -0.74
HERC1-210ENST00000560897 IFNAR2P48551 515 aa10.43□□□□□ -0.74
HERC1-210ENST00000560897 CRY1Q16526 586 aa10.43□□□□□ -0.74
HERC1-210ENST00000560897 TAF1BQ53T94 588 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms