RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 ANAPC7Q9UJX3 599 aa13.72□□□□□ -0.21
SNX1-211ENST00000560829 KIAA1257Q9ULG3 409 aa13.72□□□□□ -0.21
SNX1-211ENST00000560829 ST3GAL5Q9UNP4 418 aa13.72□□□□□ -0.21
SNX1-211ENST00000560829 CEP83Q9Y592 693 aa13.72□□□□□ -0.21
SNX1-211ENST00000560829 TCRBV5S1A1TA0A578 114 aa13.72□□□□□ -0.21
SNX1-211ENST00000560829 PIRO00625 290 aa13.72□□□□□ -0.21
SNX1-211ENST00000560829 TLR3O15455 904 aaKnown RBP13.72□□□□□ -0.21
SNX1-211ENST00000560829 SLC1A1P43005 524 aa13.72□□□□□ -0.21
SNX1-211ENST00000560829 VEGFBP49765 207 aa13.72□□□□□ -0.21
SNX1-211ENST00000560829 PRMT2P55345 433 aa13.72□□□□□ -0.21
SNX1-211ENST00000560829 PTK7Q13308 1070 aa13.72□□□□□ -0.21
SNX1-211ENST00000560829 MAMLD1Q13495 774 aa13.72□□□□□ -0.21
SNX1-211ENST00000560829 C9orf57Q5W0N0 161 aa13.72□□□□□ -0.21
SNX1-211ENST00000560829 TWF2Q6IBS0 349 aaKnown RBP13.72□□□□□ -0.21
SNX1-211ENST00000560829 C1orf131Q8NDD1 294 aaKnown RBP13.72□□□□□ -0.21
SNX1-211ENST00000560829 C18orf25Q96B23 403 aaPredicted RBP13.72□□□□□ -0.21
SNX1-211ENST00000560829 PARVAQ9NVD7 372 aa13.72□□□□□ -0.21
SNX1-211ENST00000560829 HMGXB4Q9UGU5 601 aa13.72□□□□□ -0.21
SNX1-211ENST00000560829 PCDHA3Q9Y5H8 950 aa13.72□□□□□ -0.21
SNX1-211ENST00000560829 RALGAPA2Q2PPJ7 1873 aa13.71□□□□□ -0.21
SNX1-211ENST00000560829 MYH10P35580 1976 aa13.71□□□□□ -0.21
SNX1-211ENST00000560829 MOXD2PA6NHM9 499 aa13.71□□□□□ -0.21
SNX1-211ENST00000560829 CCDC188H7C350 402 aa13.71□□□□□ -0.21
SNX1-211ENST00000560829 ATP8B1O43520 1251 aa13.71□□□□□ -0.21
SNX1-211ENST00000560829 ERLIN1O75477 346 aa13.71□□□□□ -0.21
SNX1-211ENST00000560829 VDRP11473 427 aa13.71□□□□□ -0.21
SNX1-211ENST00000560829 CD19P15391 556 aa13.71□□□□□ -0.21
SNX1-211ENST00000560829 ATF7P17544 494 aaPredicted RBP13.71□□□□□ -0.21
SNX1-211ENST00000560829 CNGA2Q16280 664 aa13.71□□□□□ -0.21
SNX1-211ENST00000560829 PTGISQ16647 500 aa13.71□□□□□ -0.21
SNX1-211ENST00000560829 GLRA4Q5JXX5 417 aa13.71□□□□□ -0.21
SNX1-211ENST00000560829 ARRDC4Q8NCT1 418 aa13.71□□□□□ -0.21
SNX1-211ENST00000560829 KRT35Q92764 455 aa13.71□□□□□ -0.21
SNX1-211ENST00000560829 BTBD6Q96KE9 485 aa13.71□□□□□ -0.21
SNX1-211ENST00000560829 TSEN34Q9BSV6 310 aaKnown RBP13.71□□□□□ -0.21
SNX1-211ENST00000560829 LRRC1Q9BTT6 524 aa13.71□□□□□ -0.21
SNX1-211ENST00000560829 APOL6Q9BWW8 343 aa13.71□□□□□ -0.21
SNX1-211ENST00000560829 ARFGAP3Q9NP61 516 aa13.71□□□□□ -0.21
SNX1-211ENST00000560829 PARP2Q9UGN5 583 aa13.71□□□□□ -0.21
SNX1-211ENST00000560829 LCMT1Q9UIC8 334 aa13.71□□□□□ -0.21
SNX1-211ENST00000560829 TMEM110-MUSTN1A8MSY1 372 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 MYO1FO00160 1098 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 PPEF2O14830 753 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 GPR182O15218 404 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 SPOPO43791 374 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 PROSCO94903 275 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 SSTR3P32745 418 aaPredicted RBP13.7□□□□□ -0.22
SNX1-211ENST00000560829 PNPLA4P41247 253 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 ACLYP53396 1101 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 GSCP56915 257 aaPredicted RBP13.7□□□□□ -0.22
SNX1-211ENST00000560829 ITGA7Q13683 1181 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 ARHGEF6Q15052 776 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 C2CD6Q53TS8 623 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 FAM26DQ5JW98 314 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 DENND1BQ6P3S1 775 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 SLAIN1Q8ND83 568 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 RNPC3Q96LT9 517 aaKnown RBP13.7□□□□□ -0.22
SNX1-211ENST00000560829 NAP1L3Q99457 506 aaPredicted RBP13.7□□□□□ -0.22
SNX1-211ENST00000560829 TRAIPQ9BWF2 469 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 NT5C1AQ9BXI3 368 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 RNF216Q9NWF9 866 aaPredicted RBP13.7□□□□□ -0.22
SNX1-211ENST00000560829 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.7□□□□□ -0.22
SNX1-211ENST00000560829 O00370 1275 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 FKTNO75072 461 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 CAND2O75155 1236 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 CTSHP09668 335 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 LRPAP1P30533 357 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 MAN1A1P33908 653 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 NDST1P52848 882 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 TAP1Q03518 808 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 STILQ15468 1287 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 TRIM71Q2Q1W2 868 aaKnown RBP13.7□□□□□ -0.22
SNX1-211ENST00000560829 PPP1R15BQ5SWA1 713 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 BEND6Q5SZJ8 279 aaPredicted RBP13.7□□□□□ -0.22
SNX1-211ENST00000560829 LHX8Q68G74 356 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 C8orf74Q6P047 294 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 LLGL2Q6P1M3 1020 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 LIMS2Q7Z4I7 341 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 ERICH1Q86X53 443 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 FEZF2Q8TBJ5 459 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 ZNF560Q96MR9 790 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 TRIM7Q9C029 511 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 ERVK-5Q9HDB9 667 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 FAM105AQ9NUU6 356 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 GDAP2Q9NXN4 497 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 SAGE1Q9NXZ1 904 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 KLK14Q9P0G3 267 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 STRIP2Q9ULQ0 834 aa13.7□□□□□ -0.22
SNX1-211ENST00000560829 TMEM191CA6NGB0 347 aa13.69□□□□□ -0.22
SNX1-211ENST00000560829 INHAP05111 366 aa13.69□□□□□ -0.22
SNX1-211ENST00000560829 MARCKSL1P49006 195 aa13.69□□□□□ -0.22
SNX1-211ENST00000560829 RNASE9P60153 205 aaKnown RBP13.69□□□□□ -0.22
SNX1-211ENST00000560829 SGO2Q562F6 1265 aa13.69□□□□□ -0.22
SNX1-211ENST00000560829 FBXO47Q5MNV8 452 aa13.69□□□□□ -0.22
SNX1-211ENST00000560829 UNC93AQ86WB7 457 aa13.69□□□□□ -0.22
SNX1-211ENST00000560829 HACE1Q8IYU2 909 aa13.69□□□□□ -0.22
SNX1-211ENST00000560829 C3orf20Q8ND61 904 aa13.69□□□□□ -0.22
SNX1-211ENST00000560829 PPP1R10Q96QC0 940 aaKnown RBP13.69□□□□□ -0.22
SNX1-211ENST00000560829 AGO3Q9H9G7 860 aaKnown RBP13.69□□□□□ -0.22
SNX1-211ENST00000560829 STIM2Q9P246 746 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms