RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 KRTAP23-1A1A580 65 aa6.77□□□□□ -1.33
MARK3-220ENST00000560417 CCDC78A2IDD5 438 aa6.77□□□□□ -1.33
MARK3-220ENST00000560417 DIRC3C9JPN6 131 aa6.77□□□□□ -1.33
MARK3-220ENST00000560417 CYP27B1O15528 508 aa6.77□□□□□ -1.33
MARK3-220ENST00000560417 ANXA2P07355 339 aaKnown RBP6.77□□□□□ -1.33
MARK3-220ENST00000560417 FGFR2P21802 821 aa6.77□□□□□ -1.33
MARK3-220ENST00000560417 KLRC1P26715 233 aa6.77□□□□□ -1.33
MARK3-220ENST00000560417 APOBEC3AP31941 199 aaPredicted RBP6.77□□□□□ -1.33
MARK3-220ENST00000560417 VIPR2P41587 438 aa6.77□□□□□ -1.33
MARK3-220ENST00000560417 MAN2A2P49641 1150 aa6.77□□□□□ -1.33
MARK3-220ENST00000560417 SCNN1GP51170 649 aa6.77□□□□□ -1.33
MARK3-220ENST00000560417 DHX8Q14562 1220 aaKnown RBP6.77□□□□□ -1.33
MARK3-220ENST00000560417 GRAMD1BQ3KR37 738 aa6.77□□□□□ -1.33
MARK3-220ENST00000560417 AMOTQ4VCS5 1084 aa6.77□□□□□ -1.33
MARK3-220ENST00000560417 DCAF12L1Q5VU92 463 aa6.77□□□□□ -1.33
MARK3-220ENST00000560417 TSHZ1Q6ZSZ6 1077 aa6.77□□□□□ -1.33
MARK3-220ENST00000560417 TMPRSS9Q7Z410 1059 aa6.77□□□□□ -1.33
MARK3-220ENST00000560417 FAM46DQ8NEK8 389 aa6.77□□□□□ -1.33
MARK3-220ENST00000560417 LRIG1Q96JA1 1093 aa6.77□□□□□ -1.33
MARK3-220ENST00000560417 PNKPQ96T60 521 aa6.77□□□□□ -1.33
MARK3-220ENST00000560417 CHST8Q9H2A9 424 aa6.77□□□□□ -1.33
MARK3-220ENST00000560417 SERHLQ9NQF3 203 aa6.77□□□□□ -1.33
MARK3-220ENST00000560417 HSFX1Q9UBD0 423 aa6.77□□□□□ -1.33
MARK3-220ENST00000560417 HESX1Q9UBX0 185 aa6.77□□□□□ -1.33
MARK3-220ENST00000560417 TMX2Q9Y320 296 aa6.77□□□□□ -1.33
MARK3-220ENST00000560417 ZNF185O15231 689 aa6.76□□□□□ -1.33
MARK3-220ENST00000560417 TCEA3O75764 348 aa6.76□□□□□ -1.33
MARK3-220ENST00000560417 WNT3P56703 355 aa6.76□□□□□ -1.33
MARK3-220ENST00000560417 BOP1Q14137 746 aaKnown RBP6.76□□□□□ -1.33
MARK3-220ENST00000560417 SLC35G1Q2M3R5 365 aa6.76□□□□□ -1.33
MARK3-220ENST00000560417 ARL13BQ3SXY8 428 aa6.76□□□□□ -1.33
MARK3-220ENST00000560417 TSHZ3Q63HK5 1081 aa6.76□□□□□ -1.33
MARK3-220ENST00000560417 Q8NA96 180 aa6.76□□□□□ -1.33
MARK3-220ENST00000560417 OR56A1Q8NGH5 318 aa6.76□□□□□ -1.33
MARK3-220ENST00000560417 POC1BQ8TC44 478 aa6.76□□□□□ -1.33
MARK3-220ENST00000560417 POF1BQ8WVV4 589 aa6.76□□□□□ -1.33
MARK3-220ENST00000560417 DCLRE1CQ96SD1 692 aaKnown RBP6.76□□□□□ -1.33
MARK3-220ENST00000560417 CRB3Q9BUF7 120 aa6.76□□□□□ -1.33
MARK3-220ENST00000560417 REXO4Q9GZR2 422 aaKnown RBP6.76□□□□□ -1.33
MARK3-220ENST00000560417 CTTNBP2NLQ9P2B4 639 aa6.76□□□□□ -1.33
MARK3-220ENST00000560417 CLCA1A8K7I4 914 aa6.75□□□□□ -1.33
MARK3-220ENST00000560417 F5H423 210 aaPredicted RBP6.75□□□□□ -1.33
MARK3-220ENST00000560417 TXNP10599 105 aaKnown RBP6.75□□□□□ -1.33
MARK3-220ENST00000560417 HARSP12081 509 aaKnown RBP6.75□□□□□ -1.33
MARK3-220ENST00000560417 HIBADHP31937 336 aaKnown RBP6.75□□□□□ -1.33
MARK3-220ENST00000560417 TRAPPC10P48553 1259 aa6.75□□□□□ -1.33
MARK3-220ENST00000560417 JAG1P78504 1218 aa6.75□□□□□ -1.33
MARK3-220ENST00000560417 PIGFQ07326 219 aa6.75□□□□□ -1.33
MARK3-220ENST00000560417 MPEG1Q2M385 716 aa6.75□□□□□ -1.33
MARK3-220ENST00000560417 CATSPERGQ6ZRH7 1159 aa6.75□□□□□ -1.33
MARK3-220ENST00000560417 LRRC55Q6ZSA7 311 aa6.75□□□□□ -1.33
MARK3-220ENST00000560417 UNC13DQ70J99 1090 aa6.75□□□□□ -1.33
MARK3-220ENST00000560417 GAS2L3Q86XJ1 694 aa6.75□□□□□ -1.33
MARK3-220ENST00000560417 IQCDQ96DY2 449 aa6.75□□□□□ -1.33
MARK3-220ENST00000560417 TRIB1Q96RU8 372 aa6.75□□□□□ -1.33
MARK3-220ENST00000560417 GDF15Q99988 308 aa6.75□□□□□ -1.33
MARK3-220ENST00000560417 MESP1Q9BRJ9 268 aa6.75□□□□□ -1.33
MARK3-220ENST00000560417 CDC23Q9UJX2 597 aa6.75□□□□□ -1.33
MARK3-220ENST00000560417 CDYLQ9Y232 598 aa6.75□□□□□ -1.33
MARK3-220ENST00000560417 ATP11BQ9Y2G3 1177 aa6.75□□□□□ -1.33
MARK3-220ENST00000560417 USP15Q9Y4E8 981 aaPredicted RBP6.75□□□□□ -1.33
MARK3-220ENST00000560417 PCDHGB2Q9Y5G2 931 aa6.75□□□□□ -1.33
MARK3-220ENST00000560417 A0A1B0GTW7 788 aa6.74□□□□□ -1.33
MARK3-220ENST00000560417 MYO1CO00159 1063 aa6.74□□□□□ -1.33
MARK3-220ENST00000560417 POLRMTO00411 1230 aaKnown RBP6.74□□□□□ -1.33
MARK3-220ENST00000560417 AREL1O15033 823 aa6.74□□□□□ -1.33
MARK3-220ENST00000560417 DCLK1O15075 740 aa6.74□□□□□ -1.33
MARK3-220ENST00000560417 TRIM24O15164 1050 aa6.74□□□□□ -1.33
MARK3-220ENST00000560417 ELANEP08246 267 aa6.74□□□□□ -1.33
MARK3-220ENST00000560417 CYP2C9P11712 490 aa6.74□□□□□ -1.33
MARK3-220ENST00000560417 HOXA5P20719 270 aa6.74□□□□□ -1.33
MARK3-220ENST00000560417 HSPA7P48741 367 aa6.74□□□□□ -1.33
MARK3-220ENST00000560417 CARSP49589 748 aaKnown RBP6.74□□□□□ -1.33
MARK3-220ENST00000560417 RNASE9P60153 205 aaKnown RBP6.74□□□□□ -1.33
MARK3-220ENST00000560417 OCA2Q04671 838 aa6.74□□□□□ -1.33
MARK3-220ENST00000560417 RRP1BQ14684 758 aaKnown RBP6.74□□□□□ -1.33
MARK3-220ENST00000560417 PDCD4Q53EL6 469 aaKnown RBP6.74□□□□□ -1.33
MARK3-220ENST00000560417 TAPT1Q6NXT6 567 aa6.74□□□□□ -1.33
MARK3-220ENST00000560417 ZDHHC24Q6UX98 284 aa6.74□□□□□ -1.33
MARK3-220ENST00000560417 MPP5Q8N3R9 675 aa6.74□□□□□ -1.33
MARK3-220ENST00000560417 VGLL2Q8N8G2 317 aa6.74□□□□□ -1.33
MARK3-220ENST00000560417 ZNF483Q8TF39 744 aaPredicted RBP6.74□□□□□ -1.33
MARK3-220ENST00000560417 SPSB4Q96A44 273 aa6.74□□□□□ -1.33
MARK3-220ENST00000560417 TMEM41AQ96HV5 264 aa6.74□□□□□ -1.33
MARK3-220ENST00000560417 MED15Q96RN5 788 aa6.74□□□□□ -1.33
MARK3-220ENST00000560417 SMOQ99835 787 aa6.74□□□□□ -1.33
MARK3-220ENST00000560417 RNPEPQ9H4A4 650 aa6.74□□□□□ -1.33
MARK3-220ENST00000560417 XPNPEP3Q9NQH7 507 aa6.74□□□□□ -1.33
MARK3-220ENST00000560417 GJB4Q9NTQ9 266 aa6.74□□□□□ -1.33
MARK3-220ENST00000560417 LRCH1Q9Y2L9 728 aa6.74□□□□□ -1.33
MARK3-220ENST00000560417 AATKQ6ZMQ8 1374 aa6.73□□□□□ -1.33
MARK3-220ENST00000560417 CCDC195A0A1B0GUA6 201 aa6.73□□□□□ -1.33
MARK3-220ENST00000560417 AHRRA9YTQ3 701 aa6.73□□□□□ -1.33
MARK3-220ENST00000560417 THAP12O43422 761 aa6.73□□□□□ -1.33
MARK3-220ENST00000560417 PLA2G6O60733 806 aa6.73□□□□□ -1.33
MARK3-220ENST00000560417 XRCC6P12956 609 aaKnown RBP eCLIP6.73□□□□□ -1.33
MARK3-220ENST00000560417 FGFR4P22455 802 aa6.73□□□□□ -1.33
MARK3-220ENST00000560417 TNFAIP2Q03169 654 aa6.73□□□□□ -1.33
MARK3-220ENST00000560417 ZNF844Q08AG5 666 aa6.73□□□□□ -1.33
MARK3-220ENST00000560417 TUBB8Q3ZCM7 444 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms