RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 JADE1Q6IE81 842 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 SLFN12LQ6IEE8 588 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 ARMCX5Q6P1M9 558 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 ITIH5Q86UX2 942 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 TMC8Q8IU68 726 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 MFSD6LQ8IWD5 586 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 ZBTB44Q8NCP5 570 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 SHKBP1Q8TBC3 707 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 LRRC15Q8TF66 581 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 NELL1Q92832 810 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 FIZ1Q96SL8 496 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 CCSER1Q9C0I3 900 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 CHRDQ9H2X0 955 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 SLITRK6Q9H5Y7 841 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 ZNF334Q9HCZ1 680 aaPredicted RBP14.68□□□□□ -0.06
SMAD3-214ENST00000560402 ZSCAN32Q9NX65 697 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 STK17AQ9UEE5 414 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 C2CD2Q9Y426 696 aa14.68□□□□□ -0.06
SMAD3-214ENST00000560402 TIMM13Q9Y5L4 95 aaPredicted RBP14.68□□□□□ -0.06
SMAD3-214ENST00000560402 DENND4CQ5VZ89 1909 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 ZNF263O14978 683 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 VNN2O95498 520 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 GDI1P31150 447 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 NASPP49321 788 aaPredicted RBP14.67□□□□□ -0.06
SMAD3-214ENST00000560402 GUCY2FP51841 1108 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 LILRA4P59901 499 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 CSTF1Q05048 431 aaKnown RBP14.67□□□□□ -0.06
SMAD3-214ENST00000560402 SMARCB1Q12824 385 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 DHX8Q14562 1220 aaKnown RBP14.67□□□□□ -0.06
SMAD3-214ENST00000560402 TEAD2Q15562 447 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 C9orf57Q5W0N0 161 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 CENPPQ6IPU0 288 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 SLC39A4Q6P5W5 647 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 MAMSTRQ6ZN01 415 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 NT5DC4Q86YG4 428 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 KRI1Q8N9T8 703 aaKnown RBP14.67□□□□□ -0.06
SMAD3-214ENST00000560402 SUMF1Q8NBK3 374 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 ATRIPQ8WXE1 791 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 PSMG2Q969U7 264 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 FAM212AQ96EL1 285 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 SENP8Q96LD8 212 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 PGLYRP2Q96PD5 576 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 USP28Q96RU2 1077 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 LRRC3Q9BY71 257 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 DNAJC25Q9H1X3 360 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 ZHX3Q9H4I2 956 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 SEL1LQ9UBV2 794 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 STYXL1Q9Y6J8 313 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 PIAS3Q9Y6X2 628 aa14.67□□□□□ -0.06
SMAD3-214ENST00000560402 ANO9A1A5B4 782 aa14.66□□□□□ -0.06
SMAD3-214ENST00000560402 SHISA7A6NL88 538 aa14.66□□□□□ -0.06
SMAD3-214ENST00000560402 HEPACAM2A8MVW5 462 aa14.66□□□□□ -0.06
SMAD3-214ENST00000560402 NRG2O14511 850 aaPredicted RBP14.66□□□□□ -0.06
SMAD3-214ENST00000560402 PPEF2O14830 753 aa14.66□□□□□ -0.06
SMAD3-214ENST00000560402 CHADO15335 359 aa14.66□□□□□ -0.06
SMAD3-214ENST00000560402 LILRB5O75023 590 aa14.66□□□□□ -0.06
SMAD3-214ENST00000560402 NFICP08651 508 aa14.66□□□□□ -0.06
SMAD3-214ENST00000560402 OR4Q2P0C623 313 aa14.66□□□□□ -0.06
SMAD3-214ENST00000560402 TXLNAP40222 546 aa14.66□□□□□ -0.06
SMAD3-214ENST00000560402 TAF6P49848 677 aa14.66□□□□□ -0.06
SMAD3-214ENST00000560402 CEBPZQ03701 1054 aaKnown RBP14.66□□□□□ -0.06
SMAD3-214ENST00000560402 FCHO2Q0JRZ9 810 aa14.66□□□□□ -0.06
SMAD3-214ENST00000560402 DUSP4Q13115 394 aa14.66□□□□□ -0.06
SMAD3-214ENST00000560402 VEPH1Q14D04 833 aa14.66□□□□□ -0.06
SMAD3-214ENST00000560402 YAF2Q8IY57 180 aa14.66□□□□□ -0.06
SMAD3-214ENST00000560402 ZNF687Q8N1G0 1237 aa14.66□□□□□ -0.06
SMAD3-214ENST00000560402 GPR161Q8N6U8 529 aaKnown RBP14.66□□□□□ -0.06
SMAD3-214ENST00000560402 C2orf15Q8WU43 125 aaKnown RBP14.66□□□□□ -0.06
SMAD3-214ENST00000560402 FAM3CQ92520 227 aa14.66□□□□□ -0.06
SMAD3-214ENST00000560402 SECISBP2LQ93073 1101 aaKnown RBP14.66□□□□□ -0.06
SMAD3-214ENST00000560402 EPC1Q9H2F5 836 aa14.66□□□□□ -0.06
SMAD3-214ENST00000560402 TNMDQ9H2S6 317 aa14.66□□□□□ -0.06
SMAD3-214ENST00000560402 C8orf33Q9H7E9 229 aaPredicted RBP14.66□□□□□ -0.06
SMAD3-214ENST00000560402 OBP2AQ9NY56 170 aa14.66□□□□□ -0.06
SMAD3-214ENST00000560402 CCDC39Q9UFE4 941 aa14.66□□□□□ -0.06
SMAD3-214ENST00000560402 ZMYM5Q9UJ78 669 aa14.66□□□□□ -0.06
SMAD3-214ENST00000560402 AGO2Q9UKV8 859 aaKnown RBP14.66□□□□□ -0.06
SMAD3-214ENST00000560402 OBSL1O75147 1896 aa14.65□□□□□ -0.06
SMAD3-214ENST00000560402 A0A1W2PQ27 194 aa14.65□□□□□ -0.06
SMAD3-214ENST00000560402 A0A1W2PQ64 194 aa14.65□□□□□ -0.06
SMAD3-214ENST00000560402 A0A1W2PQD8 194 aa14.65□□□□□ -0.06
SMAD3-214ENST00000560402 A0A1W2PRU2 124 aa14.65□□□□□ -0.06
SMAD3-214ENST00000560402 ARNTLO00327 626 aa14.65□□□□□ -0.06
SMAD3-214ENST00000560402 PIRO00625 290 aa14.65□□□□□ -0.06
SMAD3-214ENST00000560402 SPTLC2O15270 562 aa14.65□□□□□ -0.06
SMAD3-214ENST00000560402 GJA1P17302 382 aa14.65□□□□□ -0.06
SMAD3-214ENST00000560402 NMT1P30419 496 aaKnown RBP14.65□□□□□ -0.06
SMAD3-214ENST00000560402 TUFMP49411 452 aaKnown RBP14.65□□□□□ -0.06
SMAD3-214ENST00000560402 CCR3P51677 355 aa14.65□□□□□ -0.06
SMAD3-214ENST00000560402 NRLP54845 237 aa14.65□□□□□ -0.06
SMAD3-214ENST00000560402 GRIN1Q05586 938 aa14.65□□□□□ -0.06
SMAD3-214ENST00000560402 FZD5Q13467 585 aa14.65□□□□□ -0.06
SMAD3-214ENST00000560402 LRRC32Q14392 662 aa14.65□□□□□ -0.06
SMAD3-214ENST00000560402 POSTNQ15063 836 aa14.65□□□□□ -0.06
SMAD3-214ENST00000560402 ARHGAP15Q53QZ3 475 aa14.65□□□□□ -0.06
SMAD3-214ENST00000560402 ADALQ6DHV7 355 aa14.65□□□□□ -0.06
SMAD3-214ENST00000560402 CSGALNACT1Q8TDX6 532 aa14.65□□□□□ -0.06
SMAD3-214ENST00000560402 ZSWIM3Q96MP5 696 aa14.65□□□□□ -0.06
SMAD3-214ENST00000560402 ZNF560Q96MR9 790 aa14.65□□□□□ -0.06
SMAD3-214ENST00000560402 GCNAQ96QF7 691 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms