RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 TMEM125Q96AQ2 219 aa4.64□□□□□ -1.67
LRRC28-218ENST00000560236 ZNF778Q96MU6 729 aa4.64□□□□□ -1.67
LRRC28-218ENST00000560236 MANSC1Q9H8J5 431 aa4.64□□□□□ -1.67
LRRC28-218ENST00000560236 VTA1Q9NP79 307 aa4.64□□□□□ -1.67
LRRC28-218ENST00000560236 INTS13Q9NVM9 706 aa4.64□□□□□ -1.67
LRRC28-218ENST00000560236 DNM3Q9UQ16 869 aa4.64□□□□□ -1.67
LRRC28-218ENST00000560236 PCDHGA2Q9Y5H1 932 aa4.64□□□□□ -1.67
LRRC28-218ENST00000560236 AFF2P51816 1311 aa4.64□□□□□ -1.67
LRRC28-218ENST00000560236 TMEM94Q12767 1356 aa4.64□□□□□ -1.67
LRRC28-218ENST00000560236 SPHKAPQ2M3C7 1700 aa4.63□□□□□ -1.67
LRRC28-218ENST00000560236 PLEKHH2Q8IVE3 1493 aa4.63□□□□□ -1.67
LRRC28-218ENST00000560236 DIP2AQ14689 1571 aa4.63□□□□□ -1.67
LRRC28-218ENST00000560236 A0A1W2PS29 197 aa4.63□□□□□ -1.67
LRRC28-218ENST00000560236 WDR91A4D1P6 747 aa4.63□□□□□ -1.67
LRRC28-218ENST00000560236 MANSC4A6NHS7 340 aaPredicted RBP4.63□□□□□ -1.67
LRRC28-218ENST00000560236 PROM1O43490 865 aa4.63□□□□□ -1.67
LRRC28-218ENST00000560236 BRINP1O60477 761 aa4.63□□□□□ -1.67
LRRC28-218ENST00000560236 GRIA3P42263 894 aa4.63□□□□□ -1.67
LRRC28-218ENST00000560236 GYS2P54840 703 aa4.63□□□□□ -1.67
LRRC28-218ENST00000560236 EXOSC10Q01780 885 aaKnown RBP4.63□□□□□ -1.67
LRRC28-218ENST00000560236 ATP2B3Q16720 1220 aa4.63□□□□□ -1.67
LRRC28-218ENST00000560236 NBPF8Q3BBV2 869 aa4.63□□□□□ -1.67
LRRC28-218ENST00000560236 DACT2Q5SW24 774 aa4.63□□□□□ -1.67
LRRC28-218ENST00000560236 KIAA1614Q5VZ46 1190 aa4.63□□□□□ -1.67
LRRC28-218ENST00000560236 ZGPATQ8N5A5 531 aaKnown RBP4.63□□□□□ -1.67
LRRC28-218ENST00000560236 NLGN4YQ8NFZ3 816 aaPredicted RBP4.63□□□□□ -1.67
LRRC28-218ENST00000560236 HASPINQ8TF76 798 aa4.63□□□□□ -1.67
LRRC28-218ENST00000560236 TFAP2BQ92481 460 aa4.63□□□□□ -1.67
LRRC28-218ENST00000560236 C14orf119Q9NWQ9 140 aa4.63□□□□□ -1.67
LRRC28-218ENST00000560236 MYBBP1AQ9BQG0 1328 aaKnown RBP4.63□□□□□ -1.67
LRRC28-218ENST00000560236 NCOA3Q9Y6Q9 1424 aa4.63□□□□□ -1.67
LRRC28-218ENST00000560236 ARHGAP23Q9P227 1491 aa4.62□□□□□ -1.67
LRRC28-218ENST00000560236 PRAMEF33A0A0G2JMD5 474 aa4.62□□□□□ -1.67
LRRC28-218ENST00000560236 WIPF3A6NGB9 483 aa4.62□□□□□ -1.67
LRRC28-218ENST00000560236 PRAMEF10O60809 474 aa4.62□□□□□ -1.67
LRRC28-218ENST00000560236 HAUS5O94927 633 aa4.62□□□□□ -1.67
LRRC28-218ENST00000560236 OSMP13725 252 aa4.62□□□□□ -1.67
LRRC28-218ENST00000560236 KRTAP10-9P60411 292 aa4.62□□□□□ -1.67
LRRC28-218ENST00000560236 RPS7P62081 194 aaKnown RBP4.62□□□□□ -1.67
LRRC28-218ENST00000560236 ATP8B2P98198 1209 aa4.62□□□□□ -1.67
LRRC28-218ENST00000560236 FPGSQ05932 587 aa4.62□□□□□ -1.67
LRRC28-218ENST00000560236 FAPQ12884 760 aa4.62□□□□□ -1.67
LRRC28-218ENST00000560236 CLNKQ7Z7G1 428 aa4.62□□□□□ -1.67
LRRC28-218ENST00000560236 TOR1AIP2Q8NFQ8 470 aa4.62□□□□□ -1.67
LRRC28-218ENST00000560236 OR2I1PQ8NGU4 316 aa4.62□□□□□ -1.67
LRRC28-218ENST00000560236 SLC30A5Q8TAD4 765 aa4.62□□□□□ -1.67
LRRC28-218ENST00000560236 DDB2Q92466 427 aa4.62□□□□□ -1.67
LRRC28-218ENST00000560236 C11orf54Q9H0W9 315 aaPredicted RBP4.62□□□□□ -1.67
LRRC28-218ENST00000560236 CCM2LQ9NUG4 571 aaPredicted RBP4.62□□□□□ -1.67
LRRC28-218ENST00000560236 ZNF70Q9UC06 446 aaPredicted RBP4.62□□□□□ -1.67
LRRC28-218ENST00000560236 EID1Q9Y6B2 187 aa4.62□□□□□ -1.67
LRRC28-218ENST00000560236 RTEL1-TNFRSF6BF6WH68 1400 aa4.62□□□□□ -1.67
LRRC28-218ENST00000560236 FMN1Q68DA7 1419 aa4.62□□□□□ -1.67
LRRC28-218ENST00000560236 KIAA1107Q9UPP5 1409 aa4.62□□□□□ -1.67
LRRC28-218ENST00000560236 SYCP2Q9BX26 1530 aa4.62□□□□□ -1.67
LRRC28-218ENST00000560236 MROH1Q8NDA8 1641 aa4.61□□□□□ -1.67
LRRC28-218ENST00000560236 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.61□□□□□ -1.67
LRRC28-218ENST00000560236 MARF1Q9Y4F3 1742 aaKnown RBP4.61□□□□□ -1.67
LRRC28-218ENST00000560236 ENPP3O14638 875 aa4.61□□□□□ -1.67
LRRC28-218ENST00000560236 CELA2AP08217 269 aa4.61□□□□□ -1.67
LRRC28-218ENST00000560236 KCNA2P16389 499 aa4.61□□□□□ -1.67
LRRC28-218ENST00000560236 GATA3P23771 443 aa4.61□□□□□ -1.67
LRRC28-218ENST00000560236 SOX5P35711 763 aa4.61□□□□□ -1.67
LRRC28-218ENST00000560236 GPR3P46089 330 aa4.61□□□□□ -1.67
LRRC28-218ENST00000560236 MTNR1BP49286 362 aa4.61□□□□□ -1.67
LRRC28-218ENST00000560236 SOX10P56693 466 aa4.61□□□□□ -1.67
LRRC28-218ENST00000560236 SRSF7Q16629 238 aaKnown RBP eCLIP4.61□□□□□ -1.67
LRRC28-218ENST00000560236 TSHZ1Q6ZSZ6 1077 aa4.61□□□□□ -1.67
LRRC28-218ENST00000560236 AMIGO2Q86SJ2 522 aa4.61□□□□□ -1.67
LRRC28-218ENST00000560236 ZNF366Q8N895 744 aa4.61□□□□□ -1.67
LRRC28-218ENST00000560236 LPIN2Q92539 896 aa4.61□□□□□ -1.67
LRRC28-218ENST00000560236 DPF1Q92782 380 aa4.61□□□□□ -1.67
LRRC28-218ENST00000560236 AHCYL2Q96HN2 611 aaKnown RBP4.61□□□□□ -1.67
LRRC28-218ENST00000560236 PGBD1Q96JS3 809 aa4.61□□□□□ -1.67
LRRC28-218ENST00000560236 C7orf25Q9BPX7 421 aa4.61□□□□□ -1.67
LRRC28-218ENST00000560236 TLR10Q9BXR5 811 aa4.61□□□□□ -1.67
LRRC28-218ENST00000560236 CAAP1Q9H8G2 361 aa4.61□□□□□ -1.67
LRRC28-218ENST00000560236 CDYLQ9Y232 598 aa4.61□□□□□ -1.67
LRRC28-218ENST00000560236 WNT6Q9Y6F9 365 aa4.61□□□□□ -1.67
LRRC28-218ENST00000560236 WASHC2CQ9Y4E1 1318 aa4.61□□□□□ -1.67
LRRC28-218ENST00000560236 BLMP54132 1417 aaPredicted RBP4.61□□□□□ -1.67
LRRC28-218ENST00000560236 UNC13BO14795 1591 aa4.61□□□□□ -1.67
LRRC28-218ENST00000560236 BRWD3Q6RI45 1802 aa4.6□□□□□ -1.67
LRRC28-218ENST00000560236 ADM5C9JUS6 153 aa4.6□□□□□ -1.67
LRRC28-218ENST00000560236 AGFG2O95081 481 aa4.6□□□□□ -1.67
LRRC28-218ENST00000560236 PRKCGP05129 697 aa4.6□□□□□ -1.67
LRRC28-218ENST00000560236 ELFN1P0C7U0 828 aa4.6□□□□□ -1.67
LRRC28-218ENST00000560236 CTGFP29279 349 aa4.6□□□□□ -1.67
LRRC28-218ENST00000560236 CTXN1P60606 82 aa4.6□□□□□ -1.67
LRRC28-218ENST00000560236 TMPRSS15P98073 1019 aa4.6□□□□□ -1.67
LRRC28-218ENST00000560236 ZNF844Q08AG5 666 aa4.6□□□□□ -1.67
LRRC28-218ENST00000560236 STAT4Q14765 748 aa4.6□□□□□ -1.67
LRRC28-218ENST00000560236 PTPRRQ15256 657 aa4.6□□□□□ -1.67
LRRC28-218ENST00000560236 EZH2Q15910 746 aaKnown RBP4.6□□□□□ -1.67
LRRC28-218ENST00000560236 CD300EQ496F6 205 aaPredicted RBP4.6□□□□□ -1.67
LRRC28-218ENST00000560236 FCRLBQ6BAA4 426 aa4.6□□□□□ -1.67
LRRC28-218ENST00000560236 ZNF425Q6IV72 752 aa4.6□□□□□ -1.67
LRRC28-218ENST00000560236 RHOT1Q8IXI2 618 aa4.6□□□□□ -1.67
LRRC28-218ENST00000560236 DPF2Q92785 391 aa4.6□□□□□ -1.67
LRRC28-218ENST00000560236 TRPC5Q9UL62 973 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms