RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 ABCD1P33897 745 aa19.15■□□□□ 0.66
HDDC3-205ENST00000559898 NUBP1P53384 320 aa19.15■□□□□ 0.66
HDDC3-205ENST00000559898 STARD6P59095 220 aa19.15■□□□□ 0.66
HDDC3-205ENST00000559898 ASIC1P78348 528 aa19.15■□□□□ 0.66
HDDC3-205ENST00000559898 MYBPC2Q14324 1141 aa19.15■□□□□ 0.66
HDDC3-205ENST00000559898 POSTNQ15063 836 aa19.15■□□□□ 0.66
HDDC3-205ENST00000559898 MLF2Q15773 248 aaPredicted RBP19.15■□□□□ 0.66
HDDC3-205ENST00000559898 PHLDB3Q6NSJ2 640 aa19.15■□□□□ 0.66
HDDC3-205ENST00000559898 VITQ6UXI7 678 aa19.15■□□□□ 0.66
HDDC3-205ENST00000559898 GAREM2Q75VX8 874 aa19.15■□□□□ 0.66
HDDC3-205ENST00000559898 EPM2AIP1Q7L775 607 aaPredicted RBP19.15■□□□□ 0.66
HDDC3-205ENST00000559898 CBWD2Q8IUF1 395 aa19.15■□□□□ 0.66
HDDC3-205ENST00000559898 CCDC65Q8IXS2 484 aa19.15■□□□□ 0.66
HDDC3-205ENST00000559898 OR5B17Q8NGF7 314 aa19.15■□□□□ 0.66
HDDC3-205ENST00000559898 MKNK1Q9BUB5 465 aa19.15■□□□□ 0.66
HDDC3-205ENST00000559898 HEBP1Q9NRV9 189 aa19.15■□□□□ 0.66
HDDC3-205ENST00000559898 EXOC7Q9UPT5 735 aa19.15■□□□□ 0.66
HDDC3-205ENST00000559898 PATJQ8NI35 1801 aa19.15■□□□□ 0.66
HDDC3-205ENST00000559898 OBSL1O75147 1896 aa19.14■□□□□ 0.65
HDDC3-205ENST00000559898 KPNA7A9QM74 516 aa19.14■□□□□ 0.65
HDDC3-205ENST00000559898 TGFB1I1O43294 461 aa19.14■□□□□ 0.65
HDDC3-205ENST00000559898 EXTL3O43909 919 aa19.14■□□□□ 0.65
HDDC3-205ENST00000559898 RFX1P22670 979 aa19.14■□□□□ 0.65
HDDC3-205ENST00000559898 GPR15P49685 360 aa19.14■□□□□ 0.65
HDDC3-205ENST00000559898 CUL4BQ13620 913 aa19.14■□□□□ 0.65
HDDC3-205ENST00000559898 CYP4A22Q5TCH4 519 aa19.14■□□□□ 0.65
HDDC3-205ENST00000559898 IQCEQ6IPM2 695 aa19.14■□□□□ 0.65
HDDC3-205ENST00000559898 ARMCX5Q6P1M9 558 aa19.14■□□□□ 0.65
HDDC3-205ENST00000559898 PJA1Q8NG27 643 aa19.14■□□□□ 0.65
HDDC3-205ENST00000559898 ELSPBP1Q96BH3 223 aa19.14■□□□□ 0.65
HDDC3-205ENST00000559898 LRRC3BQ96PB8 259 aa19.14■□□□□ 0.65
HDDC3-205ENST00000559898 DDX23Q9BUQ8 820 aaKnown RBP19.14■□□□□ 0.65
HDDC3-205ENST00000559898 MTMR12Q9C0I1 747 aa19.14■□□□□ 0.65
HDDC3-205ENST00000559898 ASAH2Q9NR71 780 aa19.14■□□□□ 0.65
HDDC3-205ENST00000559898 L1RE1Q9UN81 338 aa19.14■□□□□ 0.65
HDDC3-205ENST00000559898 SIT1Q9Y3P8 196 aa19.14■□□□□ 0.65
HDDC3-205ENST00000559898 KIF26AQ9ULI4 1882 aaPredicted RBP19.14■□□□□ 0.65
HDDC3-205ENST00000559898 DENND4CQ5VZ89 1909 aa19.13■□□□□ 0.65
HDDC3-205ENST00000559898 ACAT1P24752 427 aaKnown RBP19.13■□□□□ 0.65
HDDC3-205ENST00000559898 AFMP43652 599 aa19.13■□□□□ 0.65
HDDC3-205ENST00000559898 EHHADHQ08426 723 aa19.13■□□□□ 0.65
HDDC3-205ENST00000559898 SDHAF4Q5VUM1 108 aa19.13■□□□□ 0.65
HDDC3-205ENST00000559898 DNAJB7Q7Z6W7 309 aaPredicted RBP19.13■□□□□ 0.65
HDDC3-205ENST00000559898 NELFCDQ8IXH7 590 aa19.13■□□□□ 0.65
HDDC3-205ENST00000559898 ELMOD1Q8N336 334 aa19.13■□□□□ 0.65
HDDC3-205ENST00000559898 PDCL2Q8N4E4 241 aa19.13■□□□□ 0.65
HDDC3-205ENST00000559898 ZSCAN18Q8TBC5 510 aaPredicted RBP19.13■□□□□ 0.65
HDDC3-205ENST00000559898 GIPC2Q8TF65 315 aa19.13■□□□□ 0.65
HDDC3-205ENST00000559898 SEPT5Q99719 369 aaPredicted RBP19.13■□□□□ 0.65
HDDC3-205ENST00000559898 C7orf25Q9BPX7 421 aa19.13■□□□□ 0.65
HDDC3-205ENST00000559898 CACNA1IQ9P0X4 2223 aa19.13■□□□□ 0.65
HDDC3-205ENST00000559898 ZFHX2Q9C0A1 2572 aaPredicted RBP19.12■□□□□ 0.65
HDDC3-205ENST00000559898 NUP210Q8TEM1 1887 aaPredicted RBP19.12■□□□□ 0.65
HDDC3-205ENST00000559898 ZNF197O14709 1029 aa19.12■□□□□ 0.65
HDDC3-205ENST00000559898 CLIC2O15247 247 aa19.12■□□□□ 0.65
HDDC3-205ENST00000559898 GFRA3O60609 400 aa19.12■□□□□ 0.65
HDDC3-205ENST00000559898 HSP90AA1P07900 732 aaKnown RBP19.12■□□□□ 0.65
HDDC3-205ENST00000559898 TARSP26639 723 aaKnown RBP19.12■□□□□ 0.65
HDDC3-205ENST00000559898 NBL1P41271 181 aa19.12■□□□□ 0.65
HDDC3-205ENST00000559898 CYP4F8P98187 520 aa19.12■□□□□ 0.65
HDDC3-205ENST00000559898 POU5F1Q01860 360 aaKnown RBP19.12■□□□□ 0.65
HDDC3-205ENST00000559898 BFSP1Q12934 665 aa19.12■□□□□ 0.65
HDDC3-205ENST00000559898 RESP18Q5W5W9 173 aa19.12■□□□□ 0.65
HDDC3-205ENST00000559898 TPRG1Q6ZUI0 275 aa19.12■□□□□ 0.65
HDDC3-205ENST00000559898 MAML2Q8IZL2 1156 aaPredicted RBP19.12■□□□□ 0.65
HDDC3-205ENST00000559898 GPD1LQ8N335 351 aa19.12■□□□□ 0.65
HDDC3-205ENST00000559898 CSGALNACT2Q8N6G5 542 aa19.12■□□□□ 0.65
HDDC3-205ENST00000559898 RDH13Q8NBN7 331 aa19.12■□□□□ 0.65
HDDC3-205ENST00000559898 SCFD1Q8WVM8 642 aa19.12■□□□□ 0.65
HDDC3-205ENST00000559898 HSPBP1Q9NZL4 362 aa19.12■□□□□ 0.65
HDDC3-205ENST00000559898 SERTAD1Q9UHV2 236 aa19.12■□□□□ 0.65
HDDC3-205ENST00000559898 MAFFQ9ULX9 164 aa19.12■□□□□ 0.65
HDDC3-205ENST00000559898 KANSL1LA0AUZ9 987 aa19.11■□□□□ 0.65
HDDC3-205ENST00000559898 MICAL2O94851 1124 aa19.11■□□□□ 0.65
HDDC3-205ENST00000559898 ALDH1A3P47895 512 aa19.11■□□□□ 0.65
HDDC3-205ENST00000559898 ME1P48163 572 aa19.11■□□□□ 0.65
HDDC3-205ENST00000559898 EPHB3P54753 998 aa19.11■□□□□ 0.65
HDDC3-205ENST00000559898 FZD5Q13467 585 aa19.11■□□□□ 0.65
HDDC3-205ENST00000559898 UBXN2BQ14CS0 331 aa19.11■□□□□ 0.65
HDDC3-205ENST00000559898 MGAT5BQ3V5L5 792 aa19.11■□□□□ 0.65
HDDC3-205ENST00000559898 SV2CQ496J9 727 aa19.11■□□□□ 0.65
HDDC3-205ENST00000559898 FAM26FQ5R3K3 315 aa19.11■□□□□ 0.65
HDDC3-205ENST00000559898 IQUBQ8NA54 791 aa19.11■□□□□ 0.65
HDDC3-205ENST00000559898 ZNF507Q8TCN5 953 aa19.11■□□□□ 0.65
HDDC3-205ENST00000559898 SMARCD2Q92925 531 aa19.11■□□□□ 0.65
HDDC3-205ENST00000559898 PSMG2Q969U7 264 aa19.11■□□□□ 0.65
HDDC3-205ENST00000559898 OXCT2Q9BYC2 517 aaPredicted RBP19.11■□□□□ 0.65
HDDC3-205ENST00000559898 GZF1Q9H116 711 aaPredicted RBP19.11■□□□□ 0.65
HDDC3-205ENST00000559898 TMEM206Q9H813 350 aa19.11■□□□□ 0.65
HDDC3-205ENST00000559898 IL21Q9HBE4 155 aa19.11■□□□□ 0.65
HDDC3-205ENST00000559898 ZFP14Q9HCL3 533 aa19.11■□□□□ 0.65
HDDC3-205ENST00000559898 SLC39A2Q9NP94 309 aa19.11■□□□□ 0.65
HDDC3-205ENST00000559898 LTB4R2Q9NPC1 389 aa19.11■□□□□ 0.65
HDDC3-205ENST00000559898 ABI2Q9NYB9 513 aaPredicted RBP19.11■□□□□ 0.65
HDDC3-205ENST00000559898 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.11■□□□□ 0.65
HDDC3-205ENST00000559898 R4GN57 208 aa19.11■□□□□ 0.65
HDDC3-205ENST00000559898 FAM170BA6NMN3 283 aa19.1■□□□□ 0.65
HDDC3-205ENST00000559898 HEPACAM2A8MVW5 462 aa19.1■□□□□ 0.65
HDDC3-205ENST00000559898 PROB1E7EW31 1015 aa19.1■□□□□ 0.65
HDDC3-205ENST00000559898 KLRC4O43908 158 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms