RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 GRXCR1A8MXD5 290 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 M0QZQ0 153 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 THAP12O43422 761 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 HCRTO43612 131 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 CILPO75339 1184 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 TACC1O75410 805 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 PLEKP08567 350 aaPredicted RBP11.13□□□□□ -0.63
TPM1-221ENST00000559831 PDGFRBP09619 1106 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 CD19P15391 556 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 WARSP23381 471 aaKnown RBP11.13□□□□□ -0.63
TPM1-221ENST00000559831 TKTP29401 623 aaKnown RBP11.13□□□□□ -0.63
TPM1-221ENST00000559831 GNA15P30679 374 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 HNRNPH3P31942 346 aaKnown RBP11.13□□□□□ -0.63
TPM1-221ENST00000559831 GNL1P36915 607 aaPredicted RBP11.13□□□□□ -0.63
TPM1-221ENST00000559831 PDE6CP51160 858 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 RAD23BP54727 409 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 INCA1Q0VD86 236 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 MEA1Q16626 185 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 FAM171A1Q5VUB5 890 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 TAF3Q5VWG9 929 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 FUT10Q6P4F1 479 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 CYP26C1Q6V0L0 522 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 DPH6Q7L8W6 267 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 IRF2BP2Q7Z5L9 587 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 SLC47A2Q86VL8 602 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 TMEM173Q86WV6 379 aaPredicted RBP11.13□□□□□ -0.63
TPM1-221ENST00000559831 CEP57Q86XR8 500 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 TMTC1Q8IUR5 882 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 TMEM86AQ8N2M4 240 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 TTC39CQ8N584 583 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 WHAMMQ8TF30 809 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 BCL7CQ8WUZ0 217 aaPredicted RBP11.13□□□□□ -0.63
TPM1-221ENST00000559831 KBTBD7Q8WVZ9 684 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 TRIM44Q96DX7 344 aaPredicted RBP11.13□□□□□ -0.63
TPM1-221ENST00000559831 TWNKQ96RR1 684 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 CHP1Q99653 195 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 NT5C1AQ9BXI3 368 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 ELOVL4Q9GZR5 314 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 KCNF1Q9H3M0 494 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 DEF6Q9H4E7 631 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 HAUS4Q9H6D7 363 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 ACP6Q9NPH0 428 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 AAASQ9NRG9 546 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 SEPT11Q9NVA2 429 aaKnown RBP11.13□□□□□ -0.63
TPM1-221ENST00000559831 DDX43Q9NXZ2 648 aaKnown RBP11.13□□□□□ -0.63
TPM1-221ENST00000559831 DSEQ9UL01 958 aa11.13□□□□□ -0.63
TPM1-221ENST00000559831 SF3B1O75533 1304 aaKnown RBP eCLIP11.12□□□□□ -0.639e-6■■■■■ 68.9
TPM1-221ENST00000559831 SOWAHDA6NJG2 315 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 MYOGP15173 224 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 CYP11B1P15538 503 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 TYMPP19971 482 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 ACAT1P24752 427 aaKnown RBP11.12□□□□□ -0.63
TPM1-221ENST00000559831 BRD2P25440 801 aaKnown RBP11.12□□□□□ -0.63
TPM1-221ENST00000559831 LMO2P25791 158 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 SSTR3P32745 418 aaPredicted RBP11.12□□□□□ -0.63
TPM1-221ENST00000559831 EIF4A3P38919 411 aaKnown RBP11.12□□□□□ -0.63
TPM1-221ENST00000559831 LHX1P48742 406 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 ZNF132P52740 706 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 BPIFB4P59827 614 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 CCZ1BP86790 482 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 CCZ1P86791 482 aaPredicted RBP11.12□□□□□ -0.63
TPM1-221ENST00000559831 MLLT1Q03111 559 aaPredicted RBP11.12□□□□□ -0.63
TPM1-221ENST00000559831 PTK2Q05397 1052 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 ELAVL2Q12926 359 aaKnown RBP11.12□□□□□ -0.63
TPM1-221ENST00000559831 HGSNATQ68CP4 663 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 FAM109BQ6ICB4 259 aaPredicted RBP11.12□□□□□ -0.63
TPM1-221ENST00000559831 OVOS1Q6IE37 1185 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 LIMS2Q7Z4I7 341 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 ACOT1Q86TX2 421 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 NOP9Q86U38 636 aaKnown RBP11.12□□□□□ -0.63
TPM1-221ENST00000559831 TMEM139Q8IV31 216 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 SLC39A11Q8N1S5 342 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 SLC4A11Q8NBS3 891 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 SP7Q8TDD2 431 aaPredicted RBP11.12□□□□□ -0.63
TPM1-221ENST00000559831 SLC20A1Q8WUM9 679 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 TMEM169Q96HH4 297 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 TMEM176AQ96HP8 235 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 IGSF21Q96ID5 467 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 B3GALT6Q96L58 329 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 HEXIM2Q96MH2 286 aaKnown RBP11.12□□□□□ -0.63
TPM1-221ENST00000559831 GDF15Q99988 308 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.12□□□□□ -0.63
TPM1-221ENST00000559831 GPR62Q9BZJ7 368 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 DNAI2Q9GZS0 605 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 DPEP3Q9H4B8 488 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 FAM124BQ9H5Z6 455 aaPredicted RBP11.12□□□□□ -0.63
TPM1-221ENST00000559831 NHEJ1Q9H9Q4 299 aaPredicted RBP11.12□□□□□ -0.63
TPM1-221ENST00000559831 SPG21Q9NZD8 308 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 ARHGAP20Q9P2F6 1191 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 CNTN6Q9UQ52 1028 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 NME7Q9Y5B8 376 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 PCDHB12Q9Y5F1 795 aa11.12□□□□□ -0.63
TPM1-221ENST00000559831 BZW2Q9Y6E2 419 aaKnown RBP11.12□□□□□ -0.63
TPM1-221ENST00000559831 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.12□□□□□ -0.63
TPM1-221ENST00000559831 FAM170AA1A519 330 aa11.11□□□□□ -0.63
TPM1-221ENST00000559831 SYN3O14994 580 aa11.11□□□□□ -0.63
TPM1-221ENST00000559831 AKR1B10O60218 316 aa11.11□□□□□ -0.63
TPM1-221ENST00000559831 CYP11A1P05108 521 aa11.11□□□□□ -0.63
TPM1-221ENST00000559831 PAEPP09466 180 aa11.11□□□□□ -0.63
TPM1-221ENST00000559831 TNFAIP3P21580 790 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms