RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 BRAFP15056 766 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 RFC5P40937 340 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 BAG6P46379 1132 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 TFAMQ00059 246 aaKnown RBP10.63□□□□□ -0.71
LRRC28-216ENST00000559819 CAV1Q03135 178 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 FASTKD3Q14CZ7 662 aaKnown RBP10.63□□□□□ -0.71
LRRC28-216ENST00000559819 TMED2Q15363 201 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 ZKSCAN8Q15776 578 aaPredicted RBP10.63□□□□□ -0.71
LRRC28-216ENST00000559819 FAM133BQ5BKY9 247 aaKnown RBP10.63□□□□□ -0.71
LRRC28-216ENST00000559819 SRRM1Q8IYB3 904 aaKnown RBP10.63□□□□□ -0.71
LRRC28-216ENST00000559819 CEP120Q8N960 986 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 CCDC89Q8N998 374 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 CHST13Q8NET6 341 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 DNERQ8NFT8 737 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 SLC16A10Q8TF71 515 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 TRAPPC12Q8WVT3 735 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 RBM15Q96T37 977 aaKnown RBP eCLIP10.63□□□□□ -0.71
LRRC28-216ENST00000559819 IMPG2Q9BZV3 1241 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 KDM4CQ9H3R0 1056 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 SAYSD1Q9NPB0 183 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.63□□□□□ -0.71
LRRC28-216ENST00000559819 KCNG1Q9UIX4 513 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 POLIQ9UNA4 740 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 ZNF148Q9UQR1 794 aa10.63□□□□□ -0.71
LRRC28-216ENST00000559819 TCRBV5S1A1TA0A578 114 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 GOLGA8SH3BPF8 625 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 MAFO75444 373 aaPredicted RBP10.62□□□□□ -0.71
LRRC28-216ENST00000559819 DENND1BQ6P3S1 775 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 DCUN1D2Q6PH85 259 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 SPOCD1Q6ZMY3 1216 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 WDR49Q8IV35 697 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 THNSL1Q8IYQ7 743 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 RNF149Q8NC42 400 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 ACO2Q99798 780 aaKnown RBP10.62□□□□□ -0.71
LRRC28-216ENST00000559819 B4GALT5O43286 388 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 BANF1O75531 89 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 USP2O75604 605 aaPredicted RBP10.62□□□□□ -0.71
LRRC28-216ENST00000559819 PRKCBP05771 671 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 MAGEA4P43358 317 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 ARSEP51690 589 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 GTF2A1P52655 376 aaPredicted RBP10.62□□□□□ -0.71
LRRC28-216ENST00000559819 DYNLT1P63172 113 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 LAMTOR4Q0VGL1 99 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 GPS1Q13098 491 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 VGLL4Q14135 290 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 ITIH4Q14624 930 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 TMEM63BQ5T3F8 832 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 LBX2Q6XYB7 198 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 FUKQ8N0W3 1084 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 ANKS4BQ8N8V4 417 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 KCNN1Q92952 543 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 MRRFQ96E11 262 aaKnown RBP10.62□□□□□ -0.71
LRRC28-216ENST00000559819 MRPL4Q9BYD3 311 aaKnown RBP10.62□□□□□ -0.71
LRRC28-216ENST00000559819 ADAM33Q9BZ11 813 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 NIF3L1Q9GZT8 377 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 SAE1Q9UBE0 346 aaPredicted RBP10.62□□□□□ -0.71
LRRC28-216ENST00000559819 SNCAIPQ9Y6H5 919 aa10.62□□□□□ -0.71
LRRC28-216ENST00000559819 LRRD1A4D1F6 860 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 ABLIM1O14639 778 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 DNALI1O14645 258 aaPredicted RBP10.61□□□□□ -0.71
LRRC28-216ENST00000559819 SNX3O60493 162 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 CALB1P05937 261 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 PGK2P07205 417 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 GHRP10912 638 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 SMTNL2Q2TAL5 461 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 FAM182AQ5T1J6 154 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 FAM160B1Q5W0V3 765 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 NUGGCQ68CJ6 796 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 TMEM192Q8IY95 271 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 RCOR2Q8IZ40 523 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 ZCCHC9Q8N567 271 aaKnown RBP10.61□□□□□ -0.71
LRRC28-216ENST00000559819 TAB3Q8N5C8 712 aaPredicted RBP10.61□□□□□ -0.71
LRRC28-216ENST00000559819 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.61□□□□□ -0.71
LRRC28-216ENST00000559819 RBM41Q96IZ5 413 aaKnown RBP10.61□□□□□ -0.71
LRRC28-216ENST00000559819 NSRP1Q9H0G5 558 aaKnown RBP10.61□□□□□ -0.71
LRRC28-216ENST00000559819 ZWILCHQ9H900 591 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 NXF1Q9UBU9 619 aaKnown RBP10.61□□□□□ -0.71
LRRC28-216ENST00000559819 CYTH4Q9UIA0 394 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 hCG_1818297A0A087WSY0 165 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 GOLGA8MH3BSY2 632 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 SPAG7O75391 227 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 TOM1L1O75674 476 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 OAS1P00973 400 aaKnown RBP10.61□□□□□ -0.71
LRRC28-216ENST00000559819 HOXC6P09630 235 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 PECAM1P16284 738 aaPredicted RBP10.61□□□□□ -0.71
LRRC28-216ENST00000559819 GCAP28676 217 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 ASPAP45381 313 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 GAD2Q05329 585 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 TRPC3Q13507 836 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 HSDL1Q3SXM5 330 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 EAPPQ56P03 285 aaPredicted RBP10.61□□□□□ -0.71
LRRC28-216ENST00000559819 NOL9Q5SY16 702 aaKnown RBP10.61□□□□□ -0.71
LRRC28-216ENST00000559819 EEF1DP3Q658K8 133 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 CYB5D1Q6P9G0 228 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 ZPBP2Q6X784 338 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 GADL1Q6ZQY3 521 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 TRPM8Q7Z2W7 1104 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 RHPN2Q8IUC4 686 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 ALLCQ8N6M5 410 aa10.61□□□□□ -0.71
LRRC28-216ENST00000559819 JOSD2Q8TAC2 188 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms