RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ZRANB2O95218 330 aaKnown RBP eCLIP4.8□□□□□ -1.64
SPG11-218ENST00000559754 MATN4O95460 622 aa4.8□□□□□ -1.64
SPG11-218ENST00000559754 GNAI2P04899 355 aa4.8□□□□□ -1.64
SPG11-218ENST00000559754 RARBP10826 455 aa4.8□□□□□ -1.64
SPG11-218ENST00000559754 CDK4P11802 303 aa4.8□□□□□ -1.64
SPG11-218ENST00000559754 PPP3CBP16298 524 aa4.8□□□□□ -1.64
SPG11-218ENST00000559754 VCAM1P19320 739 aa4.8□□□□□ -1.64
SPG11-218ENST00000559754 PDCP20941 246 aa4.8□□□□□ -1.64
SPG11-218ENST00000559754 PRDX5P30044 214 aa4.8□□□□□ -1.64
SPG11-218ENST00000559754 PSMC1P62191 440 aaKnown RBP4.8□□□□□ -1.64
SPG11-218ENST00000559754 MC2RQ01718 297 aa4.8□□□□□ -1.64
SPG11-218ENST00000559754 TUBB3Q13509 450 aa4.8□□□□□ -1.64
SPG11-218ENST00000559754 FAM9AQ8IZU1 332 aaPredicted RBP4.8□□□□□ -1.64
SPG11-218ENST00000559754 MYCBPAPQ8TBZ2 947 aa4.8□□□□□ -1.64
SPG11-218ENST00000559754 RGMAQ96B86 450 aa4.8□□□□□ -1.64
SPG11-218ENST00000559754 OSBPL9Q96SU4 736 aa4.8□□□□□ -1.64
SPG11-218ENST00000559754 VKORC1Q9BQB6 163 aa4.8□□□□□ -1.64
SPG11-218ENST00000559754 GPR35Q9HC97 309 aa4.8□□□□□ -1.64
SPG11-218ENST00000559754 KMT5AQ9NQR1 393 aa4.8□□□□□ -1.64
SPG11-218ENST00000559754 KLC4Q9NSK0 619 aa4.8□□□□□ -1.64
SPG11-218ENST00000559754 KLHL42Q9P2K6 505 aa4.8□□□□□ -1.64
SPG11-218ENST00000559754 ARPP21Q9UBL0 812 aaPredicted RBP4.8□□□□□ -1.64
SPG11-218ENST00000559754 POLR2AP24928 1970 aaKnown RBP4.8□□□□□ -1.64
SPG11-218ENST00000559754 CHRM2P08172 466 aa4.79□□□□□ -1.64
SPG11-218ENST00000559754 GPD1P21695 349 aa4.79□□□□□ -1.64
SPG11-218ENST00000559754 NDUFV1P49821 464 aa4.79□□□□□ -1.64
SPG11-218ENST00000559754 ZNF135P52742 658 aaPredicted RBP4.79□□□□□ -1.64
SPG11-218ENST00000559754 HK3P52790 923 aa4.79□□□□□ -1.64
SPG11-218ENST00000559754 NOGQ13253 232 aa4.79□□□□□ -1.64
SPG11-218ENST00000559754 HABP2Q14520 560 aaPredicted RBP4.79□□□□□ -1.64
SPG11-218ENST00000559754 TXNRD1Q16881 649 aa4.79□□□□□ -1.64
SPG11-218ENST00000559754 FAM153CQ494X1 144 aa4.79□□□□□ -1.64
SPG11-218ENST00000559754 ZKSCAN2Q63HK3 967 aa4.79□□□□□ -1.64
SPG11-218ENST00000559754 SLC30A10Q6XR72 485 aa4.79□□□□□ -1.64
SPG11-218ENST00000559754 TSHZ1Q6ZSZ6 1077 aa4.79□□□□□ -1.64
SPG11-218ENST00000559754 USP45Q70EL2 814 aa4.79□□□□□ -1.64
SPG11-218ENST00000559754 FAM90A1Q86YD7 464 aa4.79□□□□□ -1.64
SPG11-218ENST00000559754 SARAFQ96BY9 339 aa4.79□□□□□ -1.64
SPG11-218ENST00000559754 CHMP4CQ96CF2 233 aa4.79□□□□□ -1.64
SPG11-218ENST00000559754 LRIG1Q96JA1 1093 aa4.79□□□□□ -1.64
SPG11-218ENST00000559754 ALG8Q9BVK2 526 aa4.79□□□□□ -1.64
SPG11-218ENST00000559754 CPNE5Q9HCH3 593 aa4.79□□□□□ -1.64
SPG11-218ENST00000559754 SLAMF7Q9NQ25 335 aa4.79□□□□□ -1.64
SPG11-218ENST00000559754 ASB6Q9NWX5 421 aa4.79□□□□□ -1.64
SPG11-218ENST00000559754 PCDHA3Q9Y5H8 950 aa4.79□□□□□ -1.64
SPG11-218ENST00000559754 TNFRSF18Q9Y5U5 241 aa4.79□□□□□ -1.64
SPG11-218ENST00000559754 NR2E3Q9Y5X4 410 aa4.79□□□□□ -1.64
SPG11-218ENST00000559754 PLEKHD1A6NEE1 506 aa4.78□□□□□ -1.64
SPG11-218ENST00000559754 ADM5C9JUS6 153 aa4.78□□□□□ -1.64
SPG11-218ENST00000559754 C1QL1O75973 258 aa4.78□□□□□ -1.64
SPG11-218ENST00000559754 FTLP02792 175 aaPredicted RBP4.78□□□□□ -1.64
SPG11-218ENST00000559754 ITGALP20701 1170 aa4.78□□□□□ -1.64
SPG11-218ENST00000559754 LPOP22079 712 aaPredicted RBP4.78□□□□□ -1.64
SPG11-218ENST00000559754 IL12RB1P42701 662 aa4.78□□□□□ -1.64
SPG11-218ENST00000559754 KIF22Q14807 665 aa4.78□□□□□ -1.64
SPG11-218ENST00000559754 PLAC9Q5JTB6 97 aa4.78□□□□□ -1.64
SPG11-218ENST00000559754 PTF1AQ7RTS3 328 aa4.78□□□□□ -1.64
SPG11-218ENST00000559754 HEATR3Q7Z4Q2 680 aa4.78□□□□□ -1.64
SPG11-218ENST00000559754 ZBTB46Q86UZ6 589 aa4.78□□□□□ -1.64
SPG11-218ENST00000559754 PRR18Q8N4B5 295 aa4.78□□□□□ -1.64
SPG11-218ENST00000559754 CPA6Q8N4T0 437 aa4.78□□□□□ -1.64
SPG11-218ENST00000559754 PSD4Q8NDX1 1056 aa4.78□□□□□ -1.64
SPG11-218ENST00000559754 PBKQ96KB5 322 aa4.78□□□□□ -1.64
SPG11-218ENST00000559754 TPSD1Q9BZJ3 242 aa4.78□□□□□ -1.64
SPG11-218ENST00000559754 IL17RBQ9NRM6 502 aa4.78□□□□□ -1.64
SPG11-218ENST00000559754 LMBRD1Q9NUN5 540 aa4.78□□□□□ -1.64
SPG11-218ENST00000559754 ETAA1Q9NY74 926 aa4.78□□□□□ -1.64
SPG11-218ENST00000559754 ABCF2Q9UG63 623 aa4.78□□□□□ -1.64
SPG11-218ENST00000559754 WDR27A2RRH5 827 aa4.77□□□□□ -1.65
SPG11-218ENST00000559754 LRRC14BA6NHZ5 514 aa4.77□□□□□ -1.65
SPG11-218ENST00000559754 LRRC3CA6NJW4 275 aa4.77□□□□□ -1.65
SPG11-218ENST00000559754 RBMXL2O75526 392 aaKnown RBP4.77□□□□□ -1.65
SPG11-218ENST00000559754 URI1O94763 535 aaPredicted RBP4.77□□□□□ -1.65
SPG11-218ENST00000559754 PARNO95453 639 aaKnown RBP4.77□□□□□ -1.65
SPG11-218ENST00000559754 IL33O95760 270 aa4.77□□□□□ -1.65
SPG11-218ENST00000559754 TTLL1O95922 423 aa4.77□□□□□ -1.65
SPG11-218ENST00000559754 POU2F2P09086 479 aa4.77□□□□□ -1.65
SPG11-218ENST00000559754 AKAP5P24588 427 aa4.77□□□□□ -1.65
SPG11-218ENST00000559754 LMO1P25800 156 aa4.77□□□□□ -1.65
SPG11-218ENST00000559754 TCF15Q12870 199 aa4.77□□□□□ -1.65
SPG11-218ENST00000559754 PGS1Q32NB8 556 aa4.77□□□□□ -1.65
SPG11-218ENST00000559754 HSP90AB2PQ58FF8 381 aa4.77□□□□□ -1.65
SPG11-218ENST00000559754 TSTD2Q5T7W7 516 aa4.77□□□□□ -1.65
SPG11-218ENST00000559754 TAF2Q6P1X5 1199 aa4.77□□□□□ -1.65
SPG11-218ENST00000559754 TNPO1Q92973 898 aaKnown RBP4.77□□□□□ -1.65
SPG11-218ENST00000559754 HSPBAP1Q96EW2 488 aa4.77□□□□□ -1.65
SPG11-218ENST00000559754 HAPLN3Q96S86 360 aa4.77□□□□□ -1.65
SPG11-218ENST00000559754 NUP88Q99567 741 aaPredicted RBP4.77□□□□□ -1.65
SPG11-218ENST00000559754 C1orf43Q9BWL3 253 aa4.77□□□□□ -1.65
SPG11-218ENST00000559754 EHD3Q9NZN3 535 aa4.77□□□□□ -1.65
SPG11-218ENST00000559754 FRMD4BQ9Y2L6 1034 aa4.77□□□□□ -1.65
SPG11-218ENST00000559754 RAD54BQ9Y620 910 aa4.77□□□□□ -1.65
SPG11-218ENST00000559754 WNT6Q9Y6F9 365 aa4.77□□□□□ -1.65
SPG11-218ENST00000559754 HNRNPMP52272 730 aaKnown RBP eCLIP4.76□□□□□ -1.65
SPG11-218ENST00000559754 EXOSC10Q01780 885 aaKnown RBP4.76□□□□□ -1.65
SPG11-218ENST00000559754 PLEKHG6Q3KR16 790 aa4.76□□□□□ -1.65
SPG11-218ENST00000559754 CCDC157Q569K6 752 aa4.76□□□□□ -1.65
SPG11-218ENST00000559754 BRDTQ58F21 947 aaPredicted RBP4.76□□□□□ -1.65
SPG11-218ENST00000559754 TEDDM1Q5T9Z0 273 aa4.76□□□□□ -1.65
SPG11-218ENST00000559754 USP37Q86T82 979 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms