RNA–Protein interactions for RNA: ENST00000559604.1

KNSTRN-208, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 4

Gene KNSTRN, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-208ENST00000559604 KPNA7A9QM74 516 aa20.6■□□□□ 0.89
KNSTRN-208ENST00000559604 LDHAP00338 332 aaKnown RBP20.6■□□□□ 0.89
KNSTRN-208ENST00000559604 VIPR2P41587 438 aa20.6■□□□□ 0.89
KNSTRN-208ENST00000559604 CDR1P51861 262 aa20.6■□□□□ 0.89
KNSTRN-208ENST00000559604 TFAMQ00059 246 aaKnown RBP20.6■□□□□ 0.89
KNSTRN-208ENST00000559604 UBXN2BQ14CS0 331 aa20.6■□□□□ 0.89
KNSTRN-208ENST00000559604 SLC39A12Q504Y0 691 aa20.6■□□□□ 0.89
KNSTRN-208ENST00000559604 SHC4Q6S5L8 630 aa20.6■□□□□ 0.89
KNSTRN-208ENST00000559604 VITQ6UXI7 678 aa20.6■□□□□ 0.89
KNSTRN-208ENST00000559604 DNAJB7Q7Z6W7 309 aaPredicted RBP20.6■□□□□ 0.89
KNSTRN-208ENST00000559604 METTL23Q86XA0 190 aa20.6■□□□□ 0.89
KNSTRN-208ENST00000559604 C1orf210Q8IVY1 113 aa20.6■□□□□ 0.89
KNSTRN-208ENST00000559604 ZSCAN18Q8TBC5 510 aaPredicted RBP20.6■□□□□ 0.89
KNSTRN-208ENST00000559604 DNASE1L2Q92874 299 aa20.6■□□□□ 0.89
KNSTRN-208ENST00000559604 NKD2Q969F2 451 aaPredicted RBP20.6■□□□□ 0.89
KNSTRN-208ENST00000559604 HPS3Q969F9 1004 aa20.6■□□□□ 0.89
KNSTRN-208ENST00000559604 FAM84AQ96KN4 292 aa20.6■□□□□ 0.89
KNSTRN-208ENST00000559604 PCIF1Q9H4Z3 704 aa20.6■□□□□ 0.89
KNSTRN-208ENST00000559604 TMEM206Q9H813 350 aa20.6■□□□□ 0.89
KNSTRN-208ENST00000559604 ZNF334Q9HCZ1 680 aaPredicted RBP20.6■□□□□ 0.89
KNSTRN-208ENST00000559604 LTB4R2Q9NPC1 389 aa20.6■□□□□ 0.89
KNSTRN-208ENST00000559604 HEBP1Q9NRV9 189 aa20.6■□□□□ 0.89
KNSTRN-208ENST00000559604 RBAKQ9NYW8 714 aaPredicted RBP20.6■□□□□ 0.89
KNSTRN-208ENST00000559604 TICRRQ7Z2Z1 1910 aa20.6■□□□□ 0.89
KNSTRN-208ENST00000559604 WDR87Q6ZQQ6 2873 aa20.59■□□□□ 0.89
KNSTRN-208ENST00000559604 FAM170BA6NMN3 283 aa20.59■□□□□ 0.89
KNSTRN-208ENST00000559604 EXTL3O43909 919 aa20.59■□□□□ 0.89
KNSTRN-208ENST00000559604 CUTAO60888 179 aa20.59■□□□□ 0.89
KNSTRN-208ENST00000559604 SV2CQ496J9 727 aa20.59■□□□□ 0.89
KNSTRN-208ENST00000559604 SCARA3Q6AZY7 606 aa20.59■□□□□ 0.89
KNSTRN-208ENST00000559604 TPRG1Q6ZUI0 275 aa20.59■□□□□ 0.89
KNSTRN-208ENST00000559604 LRRTM3Q86VH5 581 aa20.59■□□□□ 0.89
KNSTRN-208ENST00000559604 THEM5Q8N1Q8 247 aa20.59■□□□□ 0.89
KNSTRN-208ENST00000559604 C1orf127Q8N9H9 656 aa20.59■□□□□ 0.89
KNSTRN-208ENST00000559604 CXorf38Q8TB03 319 aa20.59■□□□□ 0.89
KNSTRN-208ENST00000559604 PSMG2Q969U7 264 aa20.59■□□□□ 0.89
KNSTRN-208ENST00000559604 DHX58Q96C10 678 aa20.59■□□□□ 0.89
KNSTRN-208ENST00000559604 ZNF560Q96MR9 790 aa20.59■□□□□ 0.89
KNSTRN-208ENST00000559604 TRMT61BQ9BVS5 477 aaKnown RBP20.59■□□□□ 0.89
KNSTRN-208ENST00000559604 OSBPL6Q9BZF3 934 aa20.59■□□□□ 0.89
KNSTRN-208ENST00000559604 TRIM9Q9C026 710 aa20.59■□□□□ 0.89
KNSTRN-208ENST00000559604 GPR88Q9GZN0 384 aa20.59■□□□□ 0.89
KNSTRN-208ENST00000559604 ASB3Q9Y575 518 aa20.59■□□□□ 0.89
KNSTRN-208ENST00000559604 ITGB3P05106 788 aa20.58■□□□□ 0.89
KNSTRN-208ENST00000559604 ZSCAN22P10073 491 aaPredicted RBP20.58■□□□□ 0.89
KNSTRN-208ENST00000559604 PSMC3P17980 439 aa20.58■□□□□ 0.89
KNSTRN-208ENST00000559604 TARSP26639 723 aaKnown RBP20.58■□□□□ 0.89
KNSTRN-208ENST00000559604 POLR2BP30876 1174 aaKnown RBP20.58■□□□□ 0.89
KNSTRN-208ENST00000559604 HOXD13P35453 343 aa20.58■□□□□ 0.89
KNSTRN-208ENST00000559604 PNPLA4P41247 253 aa20.58■□□□□ 0.89
KNSTRN-208ENST00000559604 FOXD4L6Q3SYB3 417 aaPredicted RBP20.58■□□□□ 0.89
KNSTRN-208ENST00000559604 STXBP5Q5T5C0 1151 aa20.58■□□□□ 0.89
KNSTRN-208ENST00000559604 FOXD4L3Q6VB84 417 aaPredicted RBP20.58■□□□□ 0.89
KNSTRN-208ENST00000559604 GAREM2Q75VX8 874 aa20.58■□□□□ 0.89
KNSTRN-208ENST00000559604 HSCBQ8IWL3 235 aa20.58■□□□□ 0.89
KNSTRN-208ENST00000559604 RSPRY1Q96DX4 576 aa20.58■□□□□ 0.89
KNSTRN-208ENST00000559604 LRRC27Q9C0I9 530 aa20.58■□□□□ 0.89
KNSTRN-208ENST00000559604 CUEDC2Q9H467 287 aa20.58■□□□□ 0.89
KNSTRN-208ENST00000559604 SLITRK6Q9H5Y7 841 aa20.58■□□□□ 0.89
KNSTRN-208ENST00000559604 BRD9Q9H8M2 597 aa20.58■□□□□ 0.89
KNSTRN-208ENST00000559604 PDE11AQ9HCR9 933 aa20.58■□□□□ 0.89
KNSTRN-208ENST00000559604 AGAP1Q9UPQ3 857 aa20.58■□□□□ 0.89
KNSTRN-208ENST00000559604 NUP210Q8TEM1 1887 aaPredicted RBP20.58■□□□□ 0.88
KNSTRN-208ENST00000559604 TULP1O00294 542 aaPredicted RBP20.57■□□□□ 0.88
KNSTRN-208ENST00000559604 F13A1P00488 732 aa20.57■□□□□ 0.88
KNSTRN-208ENST00000559604 ATF6P18850 670 aa20.57■□□□□ 0.88
KNSTRN-208ENST00000559604 GDI1P31150 447 aa20.57■□□□□ 0.88
KNSTRN-208ENST00000559604 TUFMP49411 452 aaKnown RBP20.57■□□□□ 0.88
KNSTRN-208ENST00000559604 MFSD6LQ8IWD5 586 aa20.57■□□□□ 0.88
KNSTRN-208ENST00000559604 MAML2Q8IZL2 1156 aaPredicted RBP20.57■□□□□ 0.88
KNSTRN-208ENST00000559604 GPD1LQ8N335 351 aa20.57■□□□□ 0.88
KNSTRN-208ENST00000559604 NOC3LQ8WTT2 800 aaKnown RBP20.57■□□□□ 0.88
KNSTRN-208ENST00000559604 CACTINQ8WUQ7 758 aaKnown RBP20.57■□□□□ 0.88
KNSTRN-208ENST00000559604 DEPDC1BQ8WUY9 529 aa20.57■□□□□ 0.88
KNSTRN-208ENST00000559604 SEPT5Q99719 369 aaPredicted RBP20.57■□□□□ 0.88
KNSTRN-208ENST00000559604 LPIN3Q9BQK8 851 aa20.57■□□□□ 0.88
KNSTRN-208ENST00000559604 MKNK1Q9BUB5 465 aa20.57■□□□□ 0.88
KNSTRN-208ENST00000559604 BCO2Q9BYV7 579 aa20.57■□□□□ 0.88
KNSTRN-208ENST00000559604 GVINP1Q7Z2Y8 2422 aa20.57■□□□□ 0.88
KNSTRN-208ENST00000559604 HEPACAM2A8MVW5 462 aa20.56■□□□□ 0.88
KNSTRN-208ENST00000559604 SP9P0CG40 484 aa20.56■□□□□ 0.88
KNSTRN-208ENST00000559604 FZD5Q13467 585 aa20.56■□□□□ 0.88
KNSTRN-208ENST00000559604 MGAT5BQ3V5L5 792 aa20.56■□□□□ 0.88
KNSTRN-208ENST00000559604 CNNM4Q6P4Q7 775 aa20.56■□□□□ 0.88
KNSTRN-208ENST00000559604 ZNF852Q6ZMS4 543 aa20.56■□□□□ 0.88
KNSTRN-208ENST00000559604 ITIH5Q86UX2 942 aa20.56■□□□□ 0.88
KNSTRN-208ENST00000559604 IQUBQ8NA54 791 aa20.56■□□□□ 0.88
KNSTRN-208ENST00000559604 C2orf15Q8WU43 125 aaKnown RBP20.56■□□□□ 0.88
KNSTRN-208ENST00000559604 IRF7Q92985 503 aa20.56■□□□□ 0.88
KNSTRN-208ENST00000559604 CLDN23Q96B33 292 aa20.56■□□□□ 0.88
KNSTRN-208ENST00000559604 NELL2Q99435 816 aa20.56■□□□□ 0.88
KNSTRN-208ENST00000559604 TRPV5Q9NQA5 729 aa20.56■□□□□ 0.88
KNSTRN-208ENST00000559604 ITGA11Q9UKX5 1188 aa20.56■□□□□ 0.88
KNSTRN-208ENST00000559604 L1RE1Q9UN81 338 aa20.56■□□□□ 0.88
KNSTRN-208ENST00000559604 R4GN57 208 aa20.56■□□□□ 0.88
KNSTRN-208ENST00000559604 DENND4CQ5VZ89 1909 aa20.56■□□□□ 0.88
KNSTRN-208ENST00000559604 KIAA0391O15091 583 aaKnown RBP20.55■□□□□ 0.88
KNSTRN-208ENST00000559604 HAPLN1P10915 354 aaPredicted RBP20.55■□□□□ 0.88
KNSTRN-208ENST00000559604 PDIA4P13667 645 aaKnown RBP20.55■□□□□ 0.88
KNSTRN-208ENST00000559604 GABRR2P28476 465 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms