RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 ABI2Q9NYB9 513 aaPredicted RBP16.79■□□□□ 0.28
TPM1-211ENST00000558314 DSEQ9UL01 958 aa16.79■□□□□ 0.28
TPM1-211ENST00000558314 C2CD2Q9Y426 696 aa16.79■□□□□ 0.28
TPM1-211ENST00000558314 NCANO14594 1321 aa16.78■□□□□ 0.28
TPM1-211ENST00000558314 MAN2B1O00754 1011 aa16.78■□□□□ 0.28
TPM1-211ENST00000558314 KRT19P08727 400 aa16.78■□□□□ 0.28
TPM1-211ENST00000558314 ADSSP30520 456 aa16.78■□□□□ 0.28
TPM1-211ENST00000558314 EPHA5P54756 1037 aa16.78■□□□□ 0.28
TPM1-211ENST00000558314 CYP4F8P98187 520 aa16.78■□□□□ 0.28
TPM1-211ENST00000558314 STK38Q15208 465 aa16.78■□□□□ 0.28
TPM1-211ENST00000558314 SV2CQ496J9 727 aa16.78■□□□□ 0.28
TPM1-211ENST00000558314 L1TD1Q5T7N2 865 aaKnown RBP16.78■□□□□ 0.28
TPM1-211ENST00000558314 CRELD2Q6UXH1 353 aaPredicted RBP16.78■□□□□ 0.28
TPM1-211ENST00000558314 ITIH5Q86UX2 942 aa16.78■□□□□ 0.28
TPM1-211ENST00000558314 DCLK2Q8N568 766 aa16.78■□□□□ 0.28
TPM1-211ENST00000558314 ATRIPQ8WXE1 791 aa16.78■□□□□ 0.28
TPM1-211ENST00000558314 HVCN1Q96D96 273 aa16.78■□□□□ 0.28
TPM1-211ENST00000558314 RSPRY1Q96DX4 576 aa16.78■□□□□ 0.28
TPM1-211ENST00000558314 GCNAQ96QF7 691 aa16.78■□□□□ 0.28
TPM1-211ENST00000558314 GPR88Q9GZN0 384 aa16.78■□□□□ 0.28
TPM1-211ENST00000558314 SEMA4AQ9H3S1 761 aa16.78■□□□□ 0.28
TPM1-211ENST00000558314 ST6GALNAC4Q9H4F1 302 aa16.78■□□□□ 0.28
TPM1-211ENST00000558314 PANK4Q9NVE7 773 aa16.78■□□□□ 0.28
TPM1-211ENST00000558314 CACNA1IQ9P0X4 2223 aa16.78■□□□□ 0.28
TPM1-211ENST00000558314 ANO9A1A5B4 782 aa16.77■□□□□ 0.28
TPM1-211ENST00000558314 SLC38A8A6NNN8 435 aa16.77■□□□□ 0.28
TPM1-211ENST00000558314 PRPF6O94906 941 aaKnown RBP16.77■□□□□ 0.28
TPM1-211ENST00000558314 IL18RAPO95256 599 aa16.77■□□□□ 0.28
TPM1-211ENST00000558314 CCNE1P24864 410 aa16.77■□□□□ 0.28
TPM1-211ENST00000558314 POLR2BP30876 1174 aaKnown RBP16.77■□□□□ 0.28
TPM1-211ENST00000558314 ID4P47928 161 aa16.77■□□□□ 0.28
TPM1-211ENST00000558314 SOX9P48436 509 aa16.77■□□□□ 0.28
TPM1-211ENST00000558314 CASP5P51878 434 aa16.77■□□□□ 0.28
TPM1-211ENST00000558314 BFSP1Q12934 665 aa16.77■□□□□ 0.28
TPM1-211ENST00000558314 MTAPQ13126 283 aa16.77■□□□□ 0.28
TPM1-211ENST00000558314 FOXD4L6Q3SYB3 417 aaPredicted RBP16.77■□□□□ 0.28
TPM1-211ENST00000558314 FOXD4L3Q6VB84 417 aaPredicted RBP16.77■□□□□ 0.28
TPM1-211ENST00000558314 ARID3BQ8IVW6 561 aaPredicted RBP16.77■□□□□ 0.28
TPM1-211ENST00000558314 MFSD6LQ8IWD5 586 aa16.77■□□□□ 0.28
TPM1-211ENST00000558314 PSMG2Q969U7 264 aa16.77■□□□□ 0.28
TPM1-211ENST00000558314 DNAJC19Q96DA6 116 aa16.77■□□□□ 0.28
TPM1-211ENST00000558314 ZFYVE19Q96K21 471 aa16.77■□□□□ 0.28
TPM1-211ENST00000558314 ZNF560Q96MR9 790 aa16.77■□□□□ 0.28
TPM1-211ENST00000558314 LRRC3Q9BY71 257 aa16.77■□□□□ 0.28
TPM1-211ENST00000558314 ZCWPW1Q9H0M4 648 aa16.77■□□□□ 0.28
TPM1-211ENST00000558314 SMG9Q9H0W8 520 aaKnown RBP16.77■□□□□ 0.28
TPM1-211ENST00000558314 LMAN1LQ9HAT1 526 aa16.77■□□□□ 0.28
TPM1-211ENST00000558314 RBAKQ9NYW8 714 aaPredicted RBP16.77■□□□□ 0.28
TPM1-211ENST00000558314 SEL1LQ9UBV2 794 aa16.77■□□□□ 0.28
TPM1-211ENST00000558314 AGAP1Q9UPQ3 857 aa16.77■□□□□ 0.28
TPM1-211ENST00000558314 MTMR6Q9Y217 621 aa16.77■□□□□ 0.28
TPM1-211ENST00000558314 ASB3Q9Y575 518 aa16.77■□□□□ 0.28
TPM1-211ENST00000558314 PCDHB13Q9Y5F0 798 aa16.77■□□□□ 0.28
TPM1-211ENST00000558314 STYXL1Q9Y6J8 313 aa16.77■□□□□ 0.28
TPM1-211ENST00000558314 DMDP11532 3685 aa16.77■□□□□ 0.27
TPM1-211ENST00000558314 KPNA7A9QM74 516 aa16.76■□□□□ 0.27
TPM1-211ENST00000558314 STX6O43752 255 aa16.76■□□□□ 0.27
TPM1-211ENST00000558314 ITGB3P05106 788 aa16.76■□□□□ 0.27
TPM1-211ENST00000558314 MAGEA9P43362 315 aa16.76■□□□□ 0.27
TPM1-211ENST00000558314 TUFMP49411 452 aaKnown RBP16.76■□□□□ 0.27
TPM1-211ENST00000558314 WNT7BP56706 349 aa16.76■□□□□ 0.27
TPM1-211ENST00000558314 LMBRD2Q68DH5 695 aaPredicted RBP16.76■□□□□ 0.27
TPM1-211ENST00000558314 GAREM2Q75VX8 874 aa16.76■□□□□ 0.27
TPM1-211ENST00000558314 LRRTM3Q86VH5 581 aa16.76■□□□□ 0.27
TPM1-211ENST00000558314 STKLD1Q8NE28 680 aa16.76■□□□□ 0.27
TPM1-211ENST00000558314 TTC16Q8NEE8 873 aa16.76■□□□□ 0.27
TPM1-211ENST00000558314 CLDN23Q96B33 292 aa16.76■□□□□ 0.27
TPM1-211ENST00000558314 CBWD1Q9BRT8 395 aa16.76■□□□□ 0.27
TPM1-211ENST00000558314 FGFBP2Q9BYJ0 223 aa16.76■□□□□ 0.27
TPM1-211ENST00000558314 NCDNQ9UBB6 729 aa16.76■□□□□ 0.27
TPM1-211ENST00000558314 TFIP11Q9UBB9 837 aaKnown RBP16.76■□□□□ 0.27
TPM1-211ENST00000558314 FBXO4Q9UKT5 387 aa16.76■□□□□ 0.27
TPM1-211ENST00000558314 MAGED2Q9UNF1 606 aaPredicted RBP16.76■□□□□ 0.27
TPM1-211ENST00000558314 R3HCC1Q9Y3T6 440 aaKnown RBP16.76■□□□□ 0.27
TPM1-211ENST00000558314 CFAP54Q96N23 3096 aa16.75■□□□□ 0.27
TPM1-211ENST00000558314 A0A087X0B3 334 aa16.75■□□□□ 0.27
TPM1-211ENST00000558314 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.75■□□□□ 0.27
TPM1-211ENST00000558314 K7ELQ4 463 aaPredicted RBP16.75■□□□□ 0.27
TPM1-211ENST00000558314 PPP1R37O75864 691 aa16.75■□□□□ 0.27
TPM1-211ENST00000558314 CYP11A1P05108 521 aa16.75■□□□□ 0.27
TPM1-211ENST00000558314 PAX3P23760 479 aa16.75■□□□□ 0.27
TPM1-211ENST00000558314 ACAT1P24752 427 aaKnown RBP16.75■□□□□ 0.27
TPM1-211ENST00000558314 TSPY1Q01534 308 aa16.75■□□□□ 0.27
TPM1-211ENST00000558314 SLC39A14Q15043 492 aa16.75■□□□□ 0.27
TPM1-211ENST00000558314 SDHAF4Q5VUM1 108 aa16.75■□□□□ 0.27
TPM1-211ENST00000558314 DCP1BQ8IZD4 617 aaKnown RBP16.75■□□□□ 0.27
TPM1-211ENST00000558314 CSGALNACT2Q8N6G5 542 aa16.75■□□□□ 0.27
TPM1-211ENST00000558314 CACTINQ8WUQ7 758 aaKnown RBP16.75■□□□□ 0.27
TPM1-211ENST00000558314 E2F7Q96AV8 911 aa16.75■□□□□ 0.27
TPM1-211ENST00000558314 PI4K2AQ9BTU6 479 aa16.75■□□□□ 0.27
TPM1-211ENST00000558314 TRPV4Q9HBA0 871 aa16.75■□□□□ 0.27
TPM1-211ENST00000558314 EP300Q09472 2414 aaPredicted RBP16.75■□□□□ 0.27
TPM1-211ENST00000558314 SCN1AP35498 2009 aa16.74■□□□□ 0.27
TPM1-211ENST00000558314 ANK1P16157 1881 aa16.74■□□□□ 0.27
TPM1-211ENST00000558314 SHISA7A6NL88 538 aa16.74■□□□□ 0.27
TPM1-211ENST00000558314 PRPF40AO75400 957 aaKnown RBP16.74■□□□□ 0.27
TPM1-211ENST00000558314 FGF19O95750 216 aa16.74■□□□□ 0.27
TPM1-211ENST00000558314 TMEM191BP0C7N4 346 aa16.74■□□□□ 0.27
TPM1-211ENST00000558314 ATF6P18850 670 aa16.74■□□□□ 0.27
TPM1-211ENST00000558314 RPS9P46781 194 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms