RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 METTL23Q86XA0 190 aa10.93□□□□□ -0.66
USP3-207ENST00000558218 THEM5Q8N1Q8 247 aa10.93□□□□□ -0.66
USP3-207ENST00000558218 ZNF507Q8TCN5 953 aa10.93□□□□□ -0.66
USP3-207ENST00000558218 C2orf15Q8WU43 125 aaKnown RBP10.93□□□□□ -0.66
USP3-207ENST00000558218 SHDQ96IW2 340 aa10.93□□□□□ -0.66
USP3-207ENST00000558218 TBC1D7Q9P0N9 293 aa10.93□□□□□ -0.66
USP3-207ENST00000558218 CGNQ9P2M7 1197 aaKnown RBP10.93□□□□□ -0.66
USP3-207ENST00000558218 FBXL21Q9UKT6 434 aa10.93□□□□□ -0.66
USP3-207ENST00000558218 PCDHA7Q9UN72 937 aa10.93□□□□□ -0.66
USP3-207ENST00000558218 ASB3Q9Y575 518 aa10.93□□□□□ -0.66
USP3-207ENST00000558218 MYH15Q9Y2K3 1946 aa10.93□□□□□ -0.66
USP3-207ENST00000558218 TRIOO75962 3097 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 KPNA7A9QM74 516 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 TISP43B9A030 160 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 ECI2O75521 394 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 SEC24AO95486 1093 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 CPB1P15086 417 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 NPR3P17342 541 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 AOC1P19801 751 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 ME1P48163 572 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 TUFMP49411 452 aaKnown RBP10.92□□□□□ -0.66
USP3-207ENST00000558218 CASP5P51878 434 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 VCPP55072 806 aaKnown RBP10.92□□□□□ -0.66
USP3-207ENST00000558218 NTHL1P78549 312 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 PFKPQ01813 784 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 PRSS36Q5K4E3 855 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 RESP18Q5W5W9 173 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 CENPPQ6IPU0 288 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 BRSK2Q8IWQ3 736 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 NPAS3Q8IXF0 933 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 GPD1LQ8N335 351 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 ITFG1Q8TB96 612 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 SPATA18Q8TC71 538 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 RSAD2Q8WXG1 361 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 DHX58Q96C10 678 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 BORCS6Q96GS4 357 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 ZNF560Q96MR9 790 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 FAM213AQ9BRX8 229 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 SMOC2Q9H3U7 446 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 USP25Q9UHP3 1055 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 ATP6V1DQ9Y5K8 247 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 NUMBLQ9Y6R0 609 aa10.92□□□□□ -0.66
USP3-207ENST00000558218 ANK1P16157 1881 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 UBE4BO95155 1302 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 ZNF233A6NK53 670 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 SPTLC1O15269 473 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 POLR2DO15514 142 aaKnown RBP10.91□□□□□ -0.66
USP3-207ENST00000558218 ACTN4O43707 911 aaKnown RBP10.91□□□□□ -0.66
USP3-207ENST00000558218 PRPF6O94906 941 aaKnown RBP10.91□□□□□ -0.66
USP3-207ENST00000558218 FGF19O95750 216 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 PDGFBP01127 241 aaPredicted RBP10.91□□□□□ -0.66
USP3-207ENST00000558218 MYL1P05976 194 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 ALDH1A3P47895 512 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 EPHB3P54753 998 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 STARD6P59095 220 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 PRKCQQ04759 706 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 TCF15Q12870 199 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 SV2CQ496J9 727 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 PARM1Q6UWI2 310 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 RNF19BQ6ZMZ0 732 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 UNC13DQ70J99 1090 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 PDZD4Q76G19 769 aaPredicted RBP10.91□□□□□ -0.66
USP3-207ENST00000558218 EPM2AIP1Q7L775 607 aaPredicted RBP10.91□□□□□ -0.66
USP3-207ENST00000558218 DPH6Q7L8W6 267 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 SIX5Q8N196 739 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 LRRC52Q8N7C0 313 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 PRSS33Q8NF86 280 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 FGF14Q92915 247 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 E2F7Q96AV8 911 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 ELSPBP1Q96BH3 223 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 NELL2Q99435 816 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 HCFC1R1Q9NWW0 138 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 RBAKQ9NYW8 714 aaPredicted RBP10.91□□□□□ -0.66
USP3-207ENST00000558218 ITGA11Q9UKX5 1188 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 TIMM13Q9Y5L4 95 aaPredicted RBP10.91□□□□□ -0.66
USP3-207ENST00000558218 KMT2EQ8IZD2 1858 aa10.91□□□□□ -0.66
USP3-207ENST00000558218 PIEZO1Q92508 2521 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 CYB561D2O14569 222 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 PPEF2O14830 753 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 NARSO43776 548 aaKnown RBP10.9□□□□□ -0.66
USP3-207ENST00000558218 FAM163BP0C2L3 166 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 SLFN14P0C7P3 912 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 CMA1P23946 247 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 GUCY2FP51841 1108 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 GPC5P78333 572 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 ASIC1P78348 528 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 RBP5P82980 135 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 DNM1Q05193 864 aaKnown RBP10.9□□□□□ -0.66
USP3-207ENST00000558218 EHHADHQ08426 723 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 TWF1Q12792 350 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 DUSP4Q13115 394 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 PSMD2Q13200 908 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 FAM26FQ5R3K3 315 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 ITIH5Q86UX2 942 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 EFCAB13Q8IY85 973 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 DCP1BQ8IZD4 617 aaKnown RBP10.9□□□□□ -0.66
USP3-207ENST00000558218 TMEM86AQ8N2M4 240 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 TMEM105Q8N8V8 129 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 TMEM174Q8WUU8 243 aa10.9□□□□□ -0.66
USP3-207ENST00000558218 CORO1BQ9BR76 489 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms