RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 TPM2P07951 284 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 HNRNPA1P09651 372 aaKnown RBP eCLIP14.67□□□□□ -0.06
SHMT2-234ENST00000557703 TRIM49P0CI25 452 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 TRIM49CP0CI26 452 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 WARSP23381 471 aaKnown RBP14.67□□□□□ -0.06
SHMT2-234ENST00000557703 IGFBP6P24592 240 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-234ENST00000557703 ELF1P32519 619 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 PIK3CAP42336 1068 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 FMO5P49326 533 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 TSPY1Q01534 308 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 NFKBIBQ15653 356 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 NFE2Q16621 373 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-234ENST00000557703 SOWAHAQ2M3V2 549 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 LEXMQ3ZCV2 418 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 PRSS55Q6UWB4 352 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-234ENST00000557703 TCEAL8Q8IYN2 117 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 ADGRF2Q8IZF7 708 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 PDCL2Q8N4E4 241 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 ANKRD20A12PQ8NF67 263 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 CEP295NLQ96MC4 621 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 MED15Q96RN5 788 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 MMS19Q96T76 1030 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 IGFLR1Q9H665 355 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 SFXN1Q9H9B4 322 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 THEGQ9P2T0 379 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 FBXW11Q9UKB1 542 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 NFE2L3Q9Y4A8 694 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 CDY1Q9Y6F8 540 aa14.67□□□□□ -0.06
SHMT2-234ENST00000557703 ATG2AQ2TAZ0 1938 aa14.66□□□□□ -0.06
SHMT2-234ENST00000557703 MTCL1Q9Y4B5 1905 aaKnown RBP14.66□□□□□ -0.06
SHMT2-234ENST00000557703 TBXAS1P24557 533 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-234ENST00000557703 YWHAEP62258 255 aaKnown RBP14.66□□□□□ -0.06
SHMT2-234ENST00000557703 NOP14P78316 857 aaKnown RBP14.66□□□□□ -0.06
SHMT2-234ENST00000557703 ROR1Q01973 937 aa14.66□□□□□ -0.06
SHMT2-234ENST00000557703 KCNH2Q12809 1159 aa14.66□□□□□ -0.06
SHMT2-234ENST00000557703 WSCD1Q658N2 575 aa14.66□□□□□ -0.06
SHMT2-234ENST00000557703 CES5AQ6NT32 575 aa14.66□□□□□ -0.06
SHMT2-234ENST00000557703 ANKRD54Q6NXT1 300 aa14.66□□□□□ -0.06
SHMT2-234ENST00000557703 UNC93AQ86WB7 457 aa14.66□□□□□ -0.06
SHMT2-234ENST00000557703 KREMEN2Q8NCW0 462 aa14.66□□□□□ -0.06
SHMT2-234ENST00000557703 TAS1R2Q8TE23 839 aa14.66□□□□□ -0.06
SHMT2-234ENST00000557703 JAKMIP2Q96AA8 810 aa14.66□□□□□ -0.06
SHMT2-234ENST00000557703 MSLNLQ96KJ4 702 aa14.66□□□□□ -0.06
SHMT2-234ENST00000557703 TNIP3Q96KP6 325 aa14.66□□□□□ -0.06
SHMT2-234ENST00000557703 B3GALT6Q96L58 329 aa14.66□□□□□ -0.06
SHMT2-234ENST00000557703 CNOT6LQ96LI5 555 aaKnown RBP14.66□□□□□ -0.06
SHMT2-234ENST00000557703 NECTIN4Q96NY8 510 aa14.66□□□□□ -0.06
SHMT2-234ENST00000557703 SNX25Q9H3E2 840 aa14.66□□□□□ -0.06
SHMT2-234ENST00000557703 ABCB6Q9NP58 842 aa14.66□□□□□ -0.06
SHMT2-234ENST00000557703 CDH9Q9ULB4 789 aa14.66□□□□□ -0.06
SHMT2-234ENST00000557703 L1RE1Q9UN81 338 aa14.66□□□□□ -0.06
SHMT2-234ENST00000557703 PCDHGC5Q9Y5F6 944 aa14.66□□□□□ -0.06
SHMT2-234ENST00000557703 NCOR1O75376 2440 aa14.65□□□□□ -0.06
SHMT2-234ENST00000557703 LRRC10BA6NIK2 292 aa14.65□□□□□ -0.06
SHMT2-234ENST00000557703 GLP2RO95838 553 aa14.65□□□□□ -0.06
SHMT2-234ENST00000557703 GNL1P36915 607 aaPredicted RBP14.65□□□□□ -0.06
SHMT2-234ENST00000557703 LTBRP36941 435 aa14.65□□□□□ -0.06
SHMT2-234ENST00000557703 MTIF2P46199 727 aaKnown RBP14.65□□□□□ -0.06
SHMT2-234ENST00000557703 TUFMP49411 452 aaKnown RBP14.65□□□□□ -0.06
SHMT2-234ENST00000557703 MRPS5P82675 430 aaKnown RBP14.65□□□□□ -0.06
SHMT2-234ENST00000557703 MAN2A1Q16706 1144 aa14.65□□□□□ -0.06
SHMT2-234ENST00000557703 LIN9Q5TKA1 542 aa14.65□□□□□ -0.06
SHMT2-234ENST00000557703 IRF2BP1Q8IU81 584 aa14.65□□□□□ -0.06
SHMT2-234ENST00000557703 SMRP1Q8NCR6 262 aa14.65□□□□□ -0.06
SHMT2-234ENST00000557703 SPPL2BQ8TCT7 592 aa14.65□□□□□ -0.06
SHMT2-234ENST00000557703 PPM1EQ8WY54 764 aa14.65□□□□□ -0.06
SHMT2-234ENST00000557703 FUBP3Q96I24 572 aaKnown RBP eCLIP14.65□□□□□ -0.06
SHMT2-234ENST00000557703 FUCA2Q9BTY2 467 aa14.65□□□□□ -0.06
SHMT2-234ENST00000557703 BCO2Q9BYV7 579 aa14.65□□□□□ -0.06
SHMT2-234ENST00000557703 NIF3L1Q9GZT8 377 aa14.65□□□□□ -0.06
SHMT2-234ENST00000557703 ZCWPW1Q9H0M4 648 aa14.65□□□□□ -0.06
SHMT2-234ENST00000557703 ADAM7Q9H2U9 754 aa14.65□□□□□ -0.06
SHMT2-234ENST00000557703 DDX43Q9NXZ2 648 aaKnown RBP14.65□□□□□ -0.06
SHMT2-234ENST00000557703 CLEC1BQ9P126 229 aa14.65□□□□□ -0.06
SHMT2-234ENST00000557703 CD207Q9UJ71 328 aa14.65□□□□□ -0.06
SHMT2-234ENST00000557703 TIMM13Q9Y5L4 95 aaPredicted RBP14.65□□□□□ -0.06
SHMT2-234ENST00000557703 PRUNE2Q8WUY3 3088 aa14.65□□□□□ -0.06
SHMT2-234ENST00000557703 WDR27A2RRH5 827 aa14.64□□□□□ -0.07
SHMT2-234ENST00000557703 XYLBO75191 536 aa14.64□□□□□ -0.07
SHMT2-234ENST00000557703 ZMYND10O75800 440 aa14.64□□□□□ -0.07
SHMT2-234ENST00000557703 CPB1P15086 417 aa14.64□□□□□ -0.07
SHMT2-234ENST00000557703 RPL17P18621 184 aaKnown RBP14.64□□□□□ -0.07
SHMT2-234ENST00000557703 ZNF165P49910 485 aa14.64□□□□□ -0.07
SHMT2-234ENST00000557703 PLD1Q13393 1074 aa14.64□□□□□ -0.07
SHMT2-234ENST00000557703 SMAD4Q13485 552 aaKnown RBP14.64□□□□□ -0.07
SHMT2-234ENST00000557703 CBWD6Q4V339 395 aa14.64□□□□□ -0.07
SHMT2-234ENST00000557703 TCP11X2Q5H9J9 407 aa14.64□□□□□ -0.07
SHMT2-234ENST00000557703 CBWD3Q5JTY5 395 aa14.64□□□□□ -0.07
SHMT2-234ENST00000557703 CBWD5Q5RIA9 395 aa14.64□□□□□ -0.07
SHMT2-234ENST00000557703 CDKAL1Q5VV42 579 aa14.64□□□□□ -0.07
SHMT2-234ENST00000557703 C4orf50Q6ZRC1 276 aa14.64□□□□□ -0.07
SHMT2-234ENST00000557703 ENOSF1Q7L5Y1 443 aa14.64□□□□□ -0.07
SHMT2-234ENST00000557703 PALB2Q86YC2 1186 aa14.64□□□□□ -0.07
SHMT2-234ENST00000557703 VN1R2Q8NFZ6 395 aa14.64□□□□□ -0.07
SHMT2-234ENST00000557703 RIPOR3Q96MK2 946 aa14.64□□□□□ -0.07
SHMT2-234ENST00000557703 TUBGCP2Q9BSJ2 902 aa14.64□□□□□ -0.07
SHMT2-234ENST00000557703 ANP32EQ9BTT0 268 aa14.64□□□□□ -0.07
SHMT2-234ENST00000557703 DNAJC25Q9H1X3 360 aa14.64□□□□□ -0.07
SHMT2-234ENST00000557703 MAN1C1Q9NR34 630 aa14.64□□□□□ -0.07
SHMT2-234ENST00000557703 NXF1Q9UBU9 619 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms