RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 CDV3Q9UKY7 258 aaKnown RBP18.02■□□□□ 0.48
NEK9-211ENST00000557673 INSL5Q9Y5Q6 135 aa18.02■□□□□ 0.48
NEK9-211ENST00000557673 PVALEFA0A1B0GWK0 134 aa18.01■□□□□ 0.47
NEK9-211ENST00000557673 HNRNPDLO14979 420 aaKnown RBP18.01■□□□□ 0.47
NEK9-211ENST00000557673 PSMC3P17980 439 aa18.01■□□□□ 0.47
NEK9-211ENST00000557673 CASP5P51878 434 aa18.01■□□□□ 0.47
NEK9-211ENST00000557673 GTF2BQ00403 316 aa18.01■□□□□ 0.47
NEK9-211ENST00000557673 DPYDQ12882 1025 aa18.01■□□□□ 0.47
NEK9-211ENST00000557673 FZD5Q13467 585 aa18.01■□□□□ 0.47
NEK9-211ENST00000557673 MRPL58Q14197 206 aaKnown RBP18.01■□□□□ 0.47
NEK9-211ENST00000557673 POSTNQ15063 836 aa18.01■□□□□ 0.47
NEK9-211ENST00000557673 SLC10A6Q3KNW5 377 aa18.01■□□□□ 0.47
NEK9-211ENST00000557673 CTXN3Q4LDR2 81 aa18.01■□□□□ 0.47
NEK9-211ENST00000557673 FAM26FQ5R3K3 315 aa18.01■□□□□ 0.47
NEK9-211ENST00000557673 ZNF280DQ6N043 979 aa18.01■□□□□ 0.47
NEK9-211ENST00000557673 DEPDC1BQ8WUY9 529 aa18.01■□□□□ 0.47
NEK9-211ENST00000557673 SMARCD2Q92925 531 aa18.01■□□□□ 0.47
NEK9-211ENST00000557673 C18orf25Q96B23 403 aaPredicted RBP18.01■□□□□ 0.47
NEK9-211ENST00000557673 HVCN1Q96D96 273 aa18.01■□□□□ 0.47
NEK9-211ENST00000557673 ASB16Q96NS5 453 aa18.01■□□□□ 0.47
NEK9-211ENST00000557673 STRA6Q9BX79 667 aa18.01■□□□□ 0.47
NEK9-211ENST00000557673 GPR88Q9GZN0 384 aa18.01■□□□□ 0.47
NEK9-211ENST00000557673 CHRDQ9H2X0 955 aa18.01■□□□□ 0.47
NEK9-211ENST00000557673 LMBRD1Q9NUN5 540 aa18.01■□□□□ 0.47
NEK9-211ENST00000557673 TBC1D7Q9P0N9 293 aa18.01■□□□□ 0.47
NEK9-211ENST00000557673 AFF4Q9UHB7 1163 aaKnown RBP18.01■□□□□ 0.47
NEK9-211ENST00000557673 FBXL5Q9UKA1 691 aa18.01■□□□□ 0.47
NEK9-211ENST00000557673 NDRG2Q9UN36 371 aaKnown RBP18.01■□□□□ 0.47
NEK9-211ENST00000557673 PATJQ8NI35 1801 aa18■□□□□ 0.47
NEK9-211ENST00000557673 GCNT3O95395 438 aa18■□□□□ 0.47
NEK9-211ENST00000557673 PIGRP01833 764 aa18■□□□□ 0.47
NEK9-211ENST00000557673 CXCL8P10145 99 aa18■□□□□ 0.47
NEK9-211ENST00000557673 FCARP24071 287 aa18■□□□□ 0.47
NEK9-211ENST00000557673 ALCAMQ13740 583 aa18■□□□□ 0.47
NEK9-211ENST00000557673 GRM2Q14416 872 aa18■□□□□ 0.47
NEK9-211ENST00000557673 ZC2HC1CQ53FD0 456 aaPredicted RBP18■□□□□ 0.47
NEK9-211ENST00000557673 C1orf228Q6PIY5 440 aa18■□□□□ 0.47
NEK9-211ENST00000557673 TSSK4Q6SA08 328 aa18■□□□□ 0.47
NEK9-211ENST00000557673 ZNF720Q7Z2F6 126 aa18■□□□□ 0.47
NEK9-211ENST00000557673 CELF5Q8N6W0 485 aaKnown RBP18■□□□□ 0.47
NEK9-211ENST00000557673 FAM3CQ92520 227 aa18■□□□□ 0.47
NEK9-211ENST00000557673 HPS3Q969F9 1004 aa18■□□□□ 0.47
NEK9-211ENST00000557673 E2F7Q96AV8 911 aa18■□□□□ 0.47
NEK9-211ENST00000557673 TCEAL4Q96EI5 215 aa18■□□□□ 0.47
NEK9-211ENST00000557673 SUSD3Q96L08 255 aa18■□□□□ 0.47
NEK9-211ENST00000557673 OXCT2Q9BYC2 517 aaPredicted RBP18■□□□□ 0.47
NEK9-211ENST00000557673 ASAH2Q9NR71 780 aa18■□□□□ 0.47
NEK9-211ENST00000557673 EXOC1Q9NV70 894 aa18■□□□□ 0.47
NEK9-211ENST00000557673 USP18Q9UMW8 372 aa18■□□□□ 0.47
NEK9-211ENST00000557673 GTF3C5Q9Y5Q8 519 aaPredicted RBP18■□□□□ 0.47
NEK9-211ENST00000557673 ANK1P16157 1881 aa18■□□□□ 0.47
NEK9-211ENST00000557673 GOLGA6L22H0YM25 854 aa17.99■□□□□ 0.47
NEK9-211ENST00000557673 SEC24AO95486 1093 aa17.99■□□□□ 0.47
NEK9-211ENST00000557673 RPN1P04843 607 aaKnown RBP17.99■□□□□ 0.47
NEK9-211ENST00000557673 CLTAP09496 248 aa17.99■□□□□ 0.47
NEK9-211ENST00000557673 MCM4P33991 863 aa17.99■□□□□ 0.47
NEK9-211ENST00000557673 TNFSF9P41273 254 aa17.99■□□□□ 0.47
NEK9-211ENST00000557673 CCR3P51677 355 aa17.99■□□□□ 0.47
NEK9-211ENST00000557673 SPAG1Q07617 926 aa17.99■□□□□ 0.47
NEK9-211ENST00000557673 PNOCQ13519 176 aa17.99■□□□□ 0.47
NEK9-211ENST00000557673 SLC39A4Q6P5W5 647 aa17.99■□□□□ 0.47
NEK9-211ENST00000557673 TMEM130Q8N3G9 435 aa17.99■□□□□ 0.47
NEK9-211ENST00000557673 GLIS3Q8NEA6 775 aa17.99■□□□□ 0.47
NEK9-211ENST00000557673 RTKNQ9BST9 563 aa17.99■□□□□ 0.47
NEK9-211ENST00000557673 TRPV4Q9HBA0 871 aa17.99■□□□□ 0.47
NEK9-211ENST00000557673 ZNF334Q9HCZ1 680 aaPredicted RBP17.99■□□□□ 0.47
NEK9-211ENST00000557673 TUBGCP4Q9UGJ1 667 aa17.99■□□□□ 0.47
NEK9-211ENST00000557673 F5P12259 2224 aa17.99■□□□□ 0.47
NEK9-211ENST00000557673 UBE4BO95155 1302 aa17.98■□□□□ 0.47
NEK9-211ENST00000557673 TISP43B9A030 160 aa17.98■□□□□ 0.47
NEK9-211ENST00000557673 ZNF263O14978 683 aa17.98■□□□□ 0.47
NEK9-211ENST00000557673 EIF3DO15371 548 aaKnown RBP eCLIP17.98■□□□□ 0.47
NEK9-211ENST00000557673 FAM189A1O60320 539 aa17.98■□□□□ 0.47
NEK9-211ENST00000557673 GDI1P31150 447 aa17.98■□□□□ 0.47
NEK9-211ENST00000557673 ATXN1P54253 815 aaKnown RBP17.98■□□□□ 0.47
NEK9-211ENST00000557673 MLLT6P55198 1093 aaPredicted RBP17.98■□□□□ 0.47
NEK9-211ENST00000557673 TWF1Q12792 350 aa17.98■□□□□ 0.47
NEK9-211ENST00000557673 KMT5BQ4FZB7 885 aa17.98■□□□□ 0.47
NEK9-211ENST00000557673 L1TD1Q5T7N2 865 aaKnown RBP17.98■□□□□ 0.47
NEK9-211ENST00000557673 POTEHQ6S545 545 aa17.98■□□□□ 0.47
NEK9-211ENST00000557673 EPM2AIP1Q7L775 607 aaPredicted RBP17.98■□□□□ 0.47
NEK9-211ENST00000557673 ELOA2Q8IYF1 753 aaPredicted RBP17.98■□□□□ 0.47
NEK9-211ENST00000557673 ZNF687Q8N1G0 1237 aa17.98■□□□□ 0.47
NEK9-211ENST00000557673 MSANTD3Q96H12 275 aa17.98■□□□□ 0.47
NEK9-211ENST00000557673 LMAN1LQ9HAT1 526 aa17.98■□□□□ 0.47
NEK9-211ENST00000557673 PIAS3Q9Y6X2 628 aa17.98■□□□□ 0.47
NEK9-211ENST00000557673 COL4A3Q01955 1670 aa17.98■□□□□ 0.47
NEK9-211ENST00000557673 TTC26A0AVF1 554 aa17.97■□□□□ 0.47
NEK9-211ENST00000557673 SHISA7A6NL88 538 aa17.97■□□□□ 0.47
NEK9-211ENST00000557673 ANKRD63C9JTQ0 380 aa17.97■□□□□ 0.47
NEK9-211ENST00000557673 OGTO15294 1046 aa17.97■□□□□ 0.47
NEK9-211ENST00000557673 MYL4P12829 197 aa17.97■□□□□ 0.47
NEK9-211ENST00000557673 CPB1P15086 417 aa17.97■□□□□ 0.47
NEK9-211ENST00000557673 CCR2P41597 374 aa17.97■□□□□ 0.47
NEK9-211ENST00000557673 EPHA5P54756 1037 aa17.97■□□□□ 0.47
NEK9-211ENST00000557673 KCNA1Q09470 495 aa17.97■□□□□ 0.47
NEK9-211ENST00000557673 PLD1Q13393 1074 aa17.97■□□□□ 0.47
NEK9-211ENST00000557673 ENOX2Q16206 610 aaKnown RBP17.97■□□□□ 0.47
NEK9-211ENST00000557673 LAIR1Q6GTX8 287 aa17.97■□□□□ 0.47
NEK9-211ENST00000557673 VITQ6UXI7 678 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms