RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 PAGR1Q9BTK6 254 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 TTLL2Q9BWV7 592 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 BCAS3Q9H6U6 928 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 PNPOQ9NVS9 261 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 KCMF1Q9P0J7 381 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 CPNE7Q9UBL6 633 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 ABCF2Q9UG63 623 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 PGAP2Q9UHJ9 254 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 MAGEL2Q9UJ55 1249 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 WDR17Q8IZU2 1322 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 ISM1B1AKI9 464 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 MYO1FO00160 1098 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 EPB41L2O43491 1005 aaKnown RBP5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 SEC24DO94855 1032 aaPredicted RBP5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 FAM163BP0C2L3 166 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 PNLIPP16233 465 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 TRHRP34981 398 aaPredicted RBP5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 STAT5AP42229 794 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 HSPA7P48741 367 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 SUMO3P55854 103 aaPredicted RBP5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 ERVFC1P60507 584 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 CDC42EP1Q00587 391 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 MPEG1Q2M385 716 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 TIGD5Q53EQ6 642 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 ZNF648Q5T619 568 aaPredicted RBP5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 TEPPQ6URK8 271 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 ANKRD18AQ8IVF6 992 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 FAM126BQ8IXS8 530 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 CELF5Q8N6W0 485 aaKnown RBP5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 RNF152Q8N8N0 203 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 IGDCC4Q8TDY8 1250 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 SKA1Q96BD8 255 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 PAWRQ96IZ0 340 aaKnown RBP5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 FAM167AQ96KS9 214 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 SAMD11Q96NU1 681 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 PPP1R16BQ96T49 567 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 OR10A5Q9H207 317 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 KCNH6Q9H252 994 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 TNFRSF12AQ9NP84 129 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 CNNM1Q9NRU3 951 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 STK26Q9P289 416 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 WASF3Q9UPY6 502 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 C5P01031 1676 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 ZFYVE26Q68DK2 2539 aa5.75□□□□□ -1.49
MTHFD1-216ENST00000557539 NSD3Q9BZ95 1437 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 DNAH14Q0VDD8 3507 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 A0A0A6YYK5 440 aaPredicted RBP5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 NUDT19A8MXV4 375 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 FFAR2O15552 330 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 CUTAO60888 179 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 TMEM127O75204 238 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 ARIH2O95376 493 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 PYGLP06737 847 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 NPR1P16066 1061 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 TNFAIP3P21580 790 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 SDHBP21912 280 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 SMARCA1P28370 1054 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 PRR5P85299 388 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 TARDBPQ13148 414 aaKnown RBP eCLIP5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 DDX10Q13206 875 aaKnown RBP5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 ARL13BQ3SXY8 428 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 VASNQ6EMK4 673 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 SLC23A3Q6PIS1 610 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 TMC5Q6UXY8 1006 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 LIPIQ6XZB0 460 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 GADL1Q6ZQY3 521 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 PDZD4Q76G19 769 aaPredicted RBP5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 MAATS1Q7Z4T9 603 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 BMP8AQ7Z5Y6 402 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 PROSER1Q86XN7 944 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 TTLL6Q8N841 843 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 OR5AN1Q8NGI8 311 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 TMX3Q96JJ7 454 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 ZC3H10Q96K80 434 aaKnown RBP5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 SOX7Q9BT81 388 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 BTBD2Q9BX70 525 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 EPB41L4AQ9HCS5 686 aaPredicted RBP5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 SARS2Q9NP81 518 aaKnown RBP5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 FEZ2Q9UHY8 353 aaPredicted RBP5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 PCDHA6Q9UN73 950 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 PCDHA1Q9Y5I3 950 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 HCFC2Q9Y5Z7 792 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 LRRFIP2Q9Y608 721 aaKnown RBP5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 RPS6KL1Q9Y6S9 549 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 USP47Q96K76 1375 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 DICER1Q9UPY3 1922 aaKnown RBP5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 IQGAP3Q86VI3 1631 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 ZNF541Q9H0D2 1346 aa5.74□□□□□ -1.49
MTHFD1-216ENST00000557539 ASPMQ8IZT6 3477 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 PLEKHH1Q9ULM0 1364 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 PRAMEF4O60810 478 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 SKAP2O75563 359 aaPredicted RBP5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 ENDOD1O94919 500 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 LDHCP07864 332 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 HSP90AA1P07900 732 aaKnown RBP5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 CTSSP25774 331 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 PDIA3P30101 505 aaKnown RBP5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 DDIT3P35638 169 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 CASP2P42575 452 aa5.73□□□□□ -1.49
MTHFD1-216ENST00000557539 SLC6A9P48067 706 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms