RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 IMPG2Q9BZV3 1241 aa15.93■□□□□ 0.14
VIPAS39-210ENST00000557466 SMYD3Q9H7B4 428 aa15.93■□□□□ 0.14
VIPAS39-210ENST00000557466 UBE2ZQ9H832 354 aaPredicted RBP15.93■□□□□ 0.14
VIPAS39-210ENST00000557466 APOBEC3GQ9HC16 384 aaKnown RBP15.93■□□□□ 0.14
VIPAS39-210ENST00000557466 COQ4Q9Y3A0 265 aa15.93■□□□□ 0.14
VIPAS39-210ENST00000557466 C2orf16Q68DN1 1984 aa15.93■□□□□ 0.14
VIPAS39-210ENST00000557466 WDR27A2RRH5 827 aa15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 OR6C75A6NL08 312 aa15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 KCNJ18B7U540 433 aa15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 TGM5O43548 720 aa15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 HCRTO43612 131 aa15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 N4BP1O75113 896 aaKnown RBP15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 AFPP02771 609 aaKnown RBP15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 OR4Q2P0C623 313 aa15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 MTIF2P46199 727 aaKnown RBP15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 RAP1GAPP47736 663 aa15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 ARPP19P56211 112 aa15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 KCNH2Q12809 1159 aa15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 KCNJ12Q14500 433 aa15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 NCAPHQ15003 741 aa15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 CDKAL1Q5VV42 579 aa15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 LILRA6Q6PI73 481 aa15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 TMEM184AQ6ZMB5 413 aa15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 DPH6Q7L8W6 267 aa15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 SPATA18Q8TC71 538 aa15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 CASP10Q92851 521 aa15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 MRPL45Q9BRJ2 306 aaKnown RBP15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 NAT10Q9H0A0 1025 aaKnown RBP15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 SDCBP2Q9H190 292 aa15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 RAB20Q9NX57 234 aa15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 CLEC1BQ9P126 229 aa15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 MAGEC2Q9UBF1 373 aaPredicted RBP15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 FBXW11Q9UKB1 542 aa15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 NME7Q9Y5B8 376 aa15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 PTPRDP23468 1912 aa15.92■□□□□ 0.14
VIPAS39-210ENST00000557466 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.91■□□□□ 0.14
VIPAS39-210ENST00000557466 GABRDO14764 452 aa15.91■□□□□ 0.14
VIPAS39-210ENST00000557466 SPATA31D3P0C874 917 aa15.91■□□□□ 0.14
VIPAS39-210ENST00000557466 CPB1P15086 417 aa15.91■□□□□ 0.14
VIPAS39-210ENST00000557466 WARSP23381 471 aaKnown RBP15.91■□□□□ 0.14
VIPAS39-210ENST00000557466 ASPAP45381 313 aa15.91■□□□□ 0.14
VIPAS39-210ENST00000557466 MAN2A1Q16706 1144 aa15.91■□□□□ 0.14
VIPAS39-210ENST00000557466 SPATA31D4Q6ZUB0 917 aa15.91■□□□□ 0.14
VIPAS39-210ENST00000557466 THEM5Q8N1Q8 247 aa15.91■□□□□ 0.14
VIPAS39-210ENST00000557466 HLA-CQ95604 372 aa15.91■□□□□ 0.14
VIPAS39-210ENST00000557466 BPIFA3Q9BQP9 254 aa15.91■□□□□ 0.14
VIPAS39-210ENST00000557466 OXCT2Q9BYC2 517 aaPredicted RBP15.91■□□□□ 0.14
VIPAS39-210ENST00000557466 NIF3L1Q9GZT8 377 aa15.91■□□□□ 0.14
VIPAS39-210ENST00000557466 MAN1C1Q9NR34 630 aa15.91■□□□□ 0.14
VIPAS39-210ENST00000557466 FANCLQ9NW38 375 aa15.91■□□□□ 0.14
VIPAS39-210ENST00000557466 DDX43Q9NXZ2 648 aaKnown RBP15.91■□□□□ 0.14
VIPAS39-210ENST00000557466 PMM2O15305 246 aa15.9■□□□□ 0.14
VIPAS39-210ENST00000557466 P4HA2O15460 535 aa15.9■□□□□ 0.14
VIPAS39-210ENST00000557466 TACC1O75410 805 aa15.9■□□□□ 0.14
VIPAS39-210ENST00000557466 SRGAP2BP0DMP2 458 aa15.9■□□□□ 0.14
VIPAS39-210ENST00000557466 KCNA5P22460 613 aa15.9■□□□□ 0.14
VIPAS39-210ENST00000557466 ACAT1P24752 427 aaKnown RBP15.9■□□□□ 0.14
VIPAS39-210ENST00000557466 EEF1GP26641 437 aaKnown RBP15.9■□□□□ 0.14
VIPAS39-210ENST00000557466 ZNF165P49910 485 aa15.9■□□□□ 0.14
VIPAS39-210ENST00000557466 CDH8P55286 799 aa15.9■□□□□ 0.14
VIPAS39-210ENST00000557466 TCP11X2Q5H9J9 407 aa15.9■□□□□ 0.14
VIPAS39-210ENST00000557466 ANKRD54Q6NXT1 300 aa15.9■□□□□ 0.14
VIPAS39-210ENST00000557466 DHX40Q8IX18 779 aaKnown RBP15.9■□□□□ 0.14
VIPAS39-210ENST00000557466 KREMEN2Q8NCW0 462 aa15.9■□□□□ 0.14
VIPAS39-210ENST00000557466 CCDC150Q8NCX0 1101 aa15.9■□□□□ 0.14
VIPAS39-210ENST00000557466 MSLNLQ96KJ4 702 aa15.9■□□□□ 0.14
VIPAS39-210ENST00000557466 BCO2Q9BYV7 579 aa15.9■□□□□ 0.14
VIPAS39-210ENST00000557466 ZCWPW1Q9H0M4 648 aa15.9■□□□□ 0.14
VIPAS39-210ENST00000557466 HSD3B7Q9H2F3 369 aa15.9■□□□□ 0.14
VIPAS39-210ENST00000557466 DZANK1Q9NVP4 752 aa15.9■□□□□ 0.14
VIPAS39-210ENST00000557466 COG5Q9UP83 839 aa15.9■□□□□ 0.14
VIPAS39-210ENST00000557466 DENND4AQ7Z401 1863 aa15.9■□□□□ 0.14
VIPAS39-210ENST00000557466 H3BQ06 376 aaPredicted RBP15.89■□□□□ 0.13
VIPAS39-210ENST00000557466 ABLIM3O94929 683 aa15.89■□□□□ 0.13
VIPAS39-210ENST00000557466 VNN2O95498 520 aa15.89■□□□□ 0.13
VIPAS39-210ENST00000557466 C1RP00736 705 aa15.89■□□□□ 0.13
VIPAS39-210ENST00000557466 P4HA1P13674 534 aa15.89■□□□□ 0.13
VIPAS39-210ENST00000557466 PRKCSHP14314 528 aaPredicted RBP15.89■□□□□ 0.13
VIPAS39-210ENST00000557466 LMO2P25791 158 aa15.89■□□□□ 0.13
VIPAS39-210ENST00000557466 LHX1P48742 406 aa15.89■□□□□ 0.13
VIPAS39-210ENST00000557466 CLUL1Q15846 466 aa15.89■□□□□ 0.13
VIPAS39-210ENST00000557466 CCDC142Q17RM4 750 aa15.89■□□□□ 0.13
VIPAS39-210ENST00000557466 INTS6LQ5JSJ4 861 aaKnown RBP15.89■□□□□ 0.13
VIPAS39-210ENST00000557466 MIIPQ5JXC2 388 aa15.89■□□□□ 0.13
VIPAS39-210ENST00000557466 SYCE2Q6PIF2 218 aa15.89■□□□□ 0.13
VIPAS39-210ENST00000557466 RNF19BQ6ZMZ0 732 aa15.89■□□□□ 0.13
VIPAS39-210ENST00000557466 ZNF461Q8TAF7 563 aa15.89■□□□□ 0.13
VIPAS39-210ENST00000557466 LMO3Q8TAP4 145 aa15.89■□□□□ 0.13
VIPAS39-210ENST00000557466 FEZF2Q8TBJ5 459 aa15.89■□□□□ 0.13
VIPAS39-210ENST00000557466 TATDN2Q93075 761 aa15.89■□□□□ 0.13
VIPAS39-210ENST00000557466 PGLYRP2Q96PD5 576 aa15.89■□□□□ 0.13
VIPAS39-210ENST00000557466 TUBGCP2Q9BSJ2 902 aa15.89■□□□□ 0.13
VIPAS39-210ENST00000557466 TAB2Q9NYJ8 693 aa15.89■□□□□ 0.13
VIPAS39-210ENST00000557466 THEGQ9P2T0 379 aa15.89■□□□□ 0.13
VIPAS39-210ENST00000557466 EYSQ5T1H1 3165 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 MTMR11A4FU01 709 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 WEE2P0C1S8 567 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 FAM163BP0C2L3 166 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 ZNF18P17022 549 aa15.88■□□□□ 0.13
VIPAS39-210ENST00000557466 PCSK1P29120 753 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms