RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 LAIR1Q6GTX8 287 aa15.29■□□□□ 0.04
SLIRP-210ENST00000557431 GPBP1Q86WP2 473 aa15.29■□□□□ 0.04
SLIRP-210ENST00000557431 GPR161Q8N6U8 529 aaKnown RBP15.29■□□□□ 0.04
SLIRP-210ENST00000557431 LEMD2Q8NC56 503 aa15.29■□□□□ 0.04
SLIRP-210ENST00000557431 FAM200AQ8TCP9 573 aa15.29■□□□□ 0.04
SLIRP-210ENST00000557431 GIPC2Q8TF65 315 aa15.29■□□□□ 0.04
SLIRP-210ENST00000557431 TIPINQ9BVW5 301 aa15.29■□□□□ 0.04
SLIRP-210ENST00000557431 ZHX3Q9H4I2 956 aa15.29■□□□□ 0.04
SLIRP-210ENST00000557431 SH2B1Q9NRF2 756 aaPredicted RBP15.29■□□□□ 0.04
SLIRP-210ENST00000557431 MYBPHLA2RUH7 354 aa15.28■□□□□ 0.04
SLIRP-210ENST00000557431 OR6C75A6NL08 312 aa15.28■□□□□ 0.04
SLIRP-210ENST00000557431 PRR5-ARHGAP8B1AHC4 643 aa15.28■□□□□ 0.04
SLIRP-210ENST00000557431 ANKRD63C9JTQ0 380 aa15.28■□□□□ 0.04
SLIRP-210ENST00000557431 DPYSL4O14531 572 aa15.28■□□□□ 0.04
SLIRP-210ENST00000557431 OGTO15294 1046 aa15.28■□□□□ 0.04
SLIRP-210ENST00000557431 CYP3A5P20815 502 aa15.28■□□□□ 0.04
SLIRP-210ENST00000557431 NMT1P30419 496 aaKnown RBP15.28■□□□□ 0.04
SLIRP-210ENST00000557431 ACOT2P49753 483 aa15.28■□□□□ 0.04
SLIRP-210ENST00000557431 NRLP54845 237 aa15.28■□□□□ 0.04
SLIRP-210ENST00000557431 LILRA4P59901 499 aa15.28■□□□□ 0.04
SLIRP-210ENST00000557431 ARHGAP8P85298 464 aa15.28■□□□□ 0.04
SLIRP-210ENST00000557431 MCM6Q14566 821 aa15.28■□□□□ 0.04
SLIRP-210ENST00000557431 SLC39A12Q504Y0 691 aa15.28■□□□□ 0.04
SLIRP-210ENST00000557431 SPATA1Q5VX52 437 aa15.28■□□□□ 0.04
SLIRP-210ENST00000557431 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.28■□□□□ 0.04
SLIRP-210ENST00000557431 SPEM1Q8N4L4 309 aa15.28■□□□□ 0.04
SLIRP-210ENST00000557431 CELF5Q8N6W0 485 aaKnown RBP15.28■□□□□ 0.04
SLIRP-210ENST00000557431 PSMG2Q969U7 264 aa15.28■□□□□ 0.04
SLIRP-210ENST00000557431 FAM84AQ96KN4 292 aa15.28■□□□□ 0.04
SLIRP-210ENST00000557431 RTKNQ9BST9 563 aa15.28■□□□□ 0.04
SLIRP-210ENST00000557431 MSTO1Q9BUK6 570 aa15.28■□□□□ 0.04
SLIRP-210ENST00000557431 PLEKHA5Q9HAU0 1116 aa15.28■□□□□ 0.04
SLIRP-210ENST00000557431 SEMA4GQ9NTN9 838 aa15.28■□□□□ 0.04
SLIRP-210ENST00000557431 TBX20Q9UMR3 447 aa15.28■□□□□ 0.04
SLIRP-210ENST00000557431 ACACBO00763 2458 aa15.28■□□□□ 0.04
SLIRP-210ENST00000557431 CEP192Q8TEP8 1941 aa15.27■□□□□ 0.04
SLIRP-210ENST00000557431 TULP1O00294 542 aaPredicted RBP15.27■□□□□ 0.04
SLIRP-210ENST00000557431 EXTL3O43909 919 aa15.27■□□□□ 0.04
SLIRP-210ENST00000557431 FAM13AO94988 1023 aa15.27■□□□□ 0.04
SLIRP-210ENST00000557431 ODC1P11926 461 aa15.27■□□□□ 0.04
SLIRP-210ENST00000557431 TYMPP19971 482 aa15.27■□□□□ 0.04
SLIRP-210ENST00000557431 GPR15P49685 360 aa15.27■□□□□ 0.04
SLIRP-210ENST00000557431 LRRC32Q14392 662 aa15.27■□□□□ 0.04
SLIRP-210ENST00000557431 PPP2R5DQ14738 602 aa15.27■□□□□ 0.04
SLIRP-210ENST00000557431 MGAT5BQ3V5L5 792 aa15.27■□□□□ 0.04
SLIRP-210ENST00000557431 ZC2HC1CQ53FD0 456 aaPredicted RBP15.27■□□□□ 0.04
SLIRP-210ENST00000557431 PPM1JQ5JR12 505 aa15.27■□□□□ 0.04
SLIRP-210ENST00000557431 C9orf57Q5W0N0 161 aa15.27■□□□□ 0.04
SLIRP-210ENST00000557431 TRIM68Q6AZZ1 485 aa15.27■□□□□ 0.04
SLIRP-210ENST00000557431 PRR23CQ6ZRP0 262 aa15.27■□□□□ 0.04
SLIRP-210ENST00000557431 MYCT1Q8N699 235 aa15.27■□□□□ 0.04
SLIRP-210ENST00000557431 BORCS6Q96GS4 357 aa15.27■□□□□ 0.04
SLIRP-210ENST00000557431 GPR88Q9GZN0 384 aa15.27■□□□□ 0.04
SLIRP-210ENST00000557431 C8orf33Q9H7E9 229 aaPredicted RBP15.27■□□□□ 0.04
SLIRP-210ENST00000557431 IL21Q9HBE4 155 aa15.27■□□□□ 0.04
SLIRP-210ENST00000557431 BLOC1S4Q9NUP1 217 aa15.27■□□□□ 0.04
SLIRP-210ENST00000557431 LARSQ9P2J5 1176 aaKnown RBP15.27■□□□□ 0.04
SLIRP-210ENST00000557431 MAFFQ9ULX9 164 aa15.27■□□□□ 0.04
SLIRP-210ENST00000557431 MYO18AQ92614 2054 aaKnown RBP15.27■□□□□ 0.03
SLIRP-210ENST00000557431 MYH10P35580 1976 aa15.27■□□□□ 0.03
SLIRP-210ENST00000557431 CD2BP2O95400 341 aaKnown RBP15.26■□□□□ 0.03
SLIRP-210ENST00000557431 RETP07949 1114 aa15.26■□□□□ 0.03
SLIRP-210ENST00000557431 MYBPC2Q14324 1141 aa15.26■□□□□ 0.03
SLIRP-210ENST00000557431 KARSQ15046 597 aaKnown RBP15.26■□□□□ 0.03
SLIRP-210ENST00000557431 SDHAF4Q5VUM1 108 aa15.26■□□□□ 0.03
SLIRP-210ENST00000557431 NAIF1Q69YI7 327 aaPredicted RBP15.26■□□□□ 0.03
SLIRP-210ENST00000557431 SCARA3Q6AZY7 606 aa15.26■□□□□ 0.03
SLIRP-210ENST00000557431 ARMCX5Q6P1M9 558 aa15.26■□□□□ 0.03
SLIRP-210ENST00000557431 MAMSTRQ6ZN01 415 aa15.26■□□□□ 0.03
SLIRP-210ENST00000557431 CEP68Q76N32 757 aa15.26■□□□□ 0.03
SLIRP-210ENST00000557431 LRRTM3Q86VH5 581 aa15.26■□□□□ 0.03
SLIRP-210ENST00000557431 FAM160A2Q8N612 972 aaPredicted RBP15.26■□□□□ 0.03
SLIRP-210ENST00000557431 RIN3Q8TB24 985 aa15.26■□□□□ 0.03
SLIRP-210ENST00000557431 BPIFB1Q8TDL5 484 aa15.26■□□□□ 0.03
SLIRP-210ENST00000557431 FIZ1Q96SL8 496 aa15.26■□□□□ 0.03
SLIRP-210ENST00000557431 PYM1Q9BRP8 204 aaKnown RBP15.26■□□□□ 0.03
SLIRP-210ENST00000557431 IER2Q9BTL4 223 aa15.26■□□□□ 0.03
SLIRP-210ENST00000557431 CPSF3Q9UKF6 684 aaKnown RBP15.26■□□□□ 0.03
SLIRP-210ENST00000557431 CCL26Q9Y258 94 aa15.26■□□□□ 0.03
SLIRP-210ENST00000557431 PIRO00625 290 aa15.25■□□□□ 0.03
SLIRP-210ENST00000557431 AXIN1O15169 862 aa15.25■□□□□ 0.03
SLIRP-210ENST00000557431 XPOTO43592 962 aaKnown RBP15.25■□□□□ 0.03
SLIRP-210ENST00000557431 PLCG1P19174 1290 aa15.25■□□□□ 0.03
SLIRP-210ENST00000557431 SDHBP21912 280 aa15.25■□□□□ 0.03
SLIRP-210ENST00000557431 GJB2P29033 226 aa15.25■□□□□ 0.03
SLIRP-210ENST00000557431 CCINQ13939 588 aa15.25■□□□□ 0.03
SLIRP-210ENST00000557431 TMEM132DQ14C87 1099 aa15.25■□□□□ 0.03
SLIRP-210ENST00000557431 SF3A2Q15428 464 aaKnown RBP15.25■□□□□ 0.03
SLIRP-210ENST00000557431 CCDC142Q17RM4 750 aa15.25■□□□□ 0.03
SLIRP-210ENST00000557431 ARHGAP29Q52LW3 1261 aa15.25■□□□□ 0.03
SLIRP-210ENST00000557431 ARHGAP15Q53QZ3 475 aa15.25■□□□□ 0.03
SLIRP-210ENST00000557431 RILPL1Q5EBL4 403 aa15.25■□□□□ 0.03
SLIRP-210ENST00000557431 LONP2Q86WA8 852 aa15.25■□□□□ 0.03
SLIRP-210ENST00000557431 RALGPS2Q86X27 583 aaPredicted RBP15.25■□□□□ 0.03
SLIRP-210ENST00000557431 EFCAB13Q8IY85 973 aa15.25■□□□□ 0.03
SLIRP-210ENST00000557431 ZSWIM2Q8NEG5 633 aa15.25■□□□□ 0.03
SLIRP-210ENST00000557431 NETO1Q8TDF5 533 aa15.25■□□□□ 0.03
SLIRP-210ENST00000557431 E2F7Q96AV8 911 aa15.25■□□□□ 0.03
SLIRP-210ENST00000557431 CHFRQ96EP1 664 aa15.25■□□□□ 0.03
SLIRP-210ENST00000557431 SLC46A2Q9BY10 475 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms