RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 FAM213AQ9BRX8 229 aa15.31■□□□□ 0.04
SNX6-210ENST00000557341 SEMA4AQ9H3S1 761 aa15.31■□□□□ 0.04
SNX6-210ENST00000557341 TRPV4Q9HBA0 871 aa15.31■□□□□ 0.04
SNX6-210ENST00000557341 SPATA6Q9NWH7 488 aaPredicted RBP15.31■□□□□ 0.04
SNX6-210ENST00000557341 MRPS17Q9Y2R5 130 aaKnown RBP15.31■□□□□ 0.04
SNX6-210ENST00000557341 ASB3Q9Y575 518 aa15.31■□□□□ 0.04
SNX6-210ENST00000557341 F5P12259 2224 aa15.31■□□□□ 0.04
SNX6-210ENST00000557341 FAM170BA6NMN3 283 aa15.3■□□□□ 0.04
SNX6-210ENST00000557341 CYB561D2O14569 222 aa15.3■□□□□ 0.04
SNX6-210ENST00000557341 NCAM2O15394 837 aa15.3■□□□□ 0.04
SNX6-210ENST00000557341 LDHAP00338 332 aaKnown RBP15.3■□□□□ 0.04
SNX6-210ENST00000557341 SP9P0CG40 484 aa15.3■□□□□ 0.04
SNX6-210ENST00000557341 GARTP22102 1010 aa15.3■□□□□ 0.04
SNX6-210ENST00000557341 TARSP26639 723 aaKnown RBP15.3■□□□□ 0.04
SNX6-210ENST00000557341 PNPLA4P41247 253 aa15.3■□□□□ 0.04
SNX6-210ENST00000557341 VEPH1Q14D04 833 aa15.3■□□□□ 0.04
SNX6-210ENST00000557341 SLC39A12Q504Y0 691 aa15.3■□□□□ 0.04
SNX6-210ENST00000557341 ZNF852Q6ZMS4 543 aa15.3■□□□□ 0.04
SNX6-210ENST00000557341 ITIH5Q86UX2 942 aa15.3■□□□□ 0.04
SNX6-210ENST00000557341 CCDC65Q8IXS2 484 aa15.3■□□□□ 0.04
SNX6-210ENST00000557341 THEM5Q8N1Q8 247 aa15.3■□□□□ 0.04
SNX6-210ENST00000557341 PDILTQ8N807 584 aa15.3■□□□□ 0.04
SNX6-210ENST00000557341 PSMG2Q969U7 264 aa15.3■□□□□ 0.04
SNX6-210ENST00000557341 E2F7Q96AV8 911 aa15.3■□□□□ 0.04
SNX6-210ENST00000557341 SAAL1Q96ER3 474 aa15.3■□□□□ 0.04
SNX6-210ENST00000557341 DCHS1Q96JQ0 3298 aa15.3■□□□□ 0.04
SNX6-210ENST00000557341 NELL2Q99435 816 aa15.3■□□□□ 0.04
SNX6-210ENST00000557341 LRRC3Q9BY71 257 aa15.3■□□□□ 0.04
SNX6-210ENST00000557341 ZCWPW1Q9H0M4 648 aa15.3■□□□□ 0.04
SNX6-210ENST00000557341 TNMDQ9H2S6 317 aa15.3■□□□□ 0.04
SNX6-210ENST00000557341 PANK4Q9NVE7 773 aa15.3■□□□□ 0.04
SNX6-210ENST00000557341 RBAKQ9NYW8 714 aaPredicted RBP15.3■□□□□ 0.04
SNX6-210ENST00000557341 SLC27A5Q9Y2P5 690 aa15.3■□□□□ 0.04
SNX6-210ENST00000557341 MTF2Q9Y483 593 aaPredicted RBP15.3■□□□□ 0.04
SNX6-210ENST00000557341 R4GN57 208 aa15.3■□□□□ 0.04
SNX6-210ENST00000557341 NCANO14594 1321 aa15.29■□□□□ 0.04
SNX6-210ENST00000557341 KPNA7A9QM74 516 aa15.29■□□□□ 0.04
SNX6-210ENST00000557341 LAMTOR5O43504 91 aa15.29■□□□□ 0.04
SNX6-210ENST00000557341 FGF19O95750 216 aa15.29■□□□□ 0.04
SNX6-210ENST00000557341 GDI1P31150 447 aa15.29■□□□□ 0.04
SNX6-210ENST00000557341 VIPR2P41587 438 aa15.29■□□□□ 0.04
SNX6-210ENST00000557341 TUFMP49411 452 aaKnown RBP15.29■□□□□ 0.04
SNX6-210ENST00000557341 TFAMQ00059 246 aaKnown RBP15.29■□□□□ 0.04
SNX6-210ENST00000557341 SMARCB1Q12824 385 aa15.29■□□□□ 0.04
SNX6-210ENST00000557341 MGAT5BQ3V5L5 792 aa15.29■□□□□ 0.04
SNX6-210ENST00000557341 STXBP4Q6ZWJ1 553 aa15.29■□□□□ 0.04
SNX6-210ENST00000557341 ADSSL1Q8N142 457 aa15.29■□□□□ 0.04
SNX6-210ENST00000557341 LINC00301Q8NCQ3 95 aa15.29■□□□□ 0.04
SNX6-210ENST00000557341 C2orf15Q8WU43 125 aaKnown RBP15.29■□□□□ 0.04
SNX6-210ENST00000557341 ZNF396Q96N95 335 aaPredicted RBP15.29■□□□□ 0.04
SNX6-210ENST00000557341 SEPT5Q99719 369 aaPredicted RBP15.29■□□□□ 0.04
SNX6-210ENST00000557341 FGFBP2Q9BYJ0 223 aa15.29■□□□□ 0.04
SNX6-210ENST00000557341 PANK2Q9BZ23 570 aa15.29■□□□□ 0.04
SNX6-210ENST00000557341 TMEM206Q9H813 350 aa15.29■□□□□ 0.04
SNX6-210ENST00000557341 ZNF334Q9HCZ1 680 aaPredicted RBP15.29■□□□□ 0.04
SNX6-210ENST00000557341 TRPV5Q9NQA5 729 aa15.29■□□□□ 0.04
SNX6-210ENST00000557341 HEPACAM2A8MVW5 462 aa15.28■□□□□ 0.04
SNX6-210ENST00000557341 TULP1O00294 542 aaPredicted RBP15.28■□□□□ 0.04
SNX6-210ENST00000557341 MAN2B1O00754 1011 aa15.28■□□□□ 0.04
SNX6-210ENST00000557341 SPTLC2O15270 562 aa15.28■□□□□ 0.04
SNX6-210ENST00000557341 PPP6R2O75170 966 aa15.28■□□□□ 0.04
SNX6-210ENST00000557341 SOAT2O75908 522 aa15.28■□□□□ 0.04
SNX6-210ENST00000557341 LMNAP02545 664 aaKnown RBP15.28■□□□□ 0.04
SNX6-210ENST00000557341 ITGB3P05106 788 aa15.28■□□□□ 0.04
SNX6-210ENST00000557341 POLR2BP30876 1174 aaKnown RBP15.28■□□□□ 0.04
SNX6-210ENST00000557341 RPS9P46781 194 aaKnown RBP15.28■□□□□ 0.04
SNX6-210ENST00000557341 WNT7BP56706 349 aa15.28■□□□□ 0.04
SNX6-210ENST00000557341 WSCD1Q658N2 575 aa15.28■□□□□ 0.04
SNX6-210ENST00000557341 DNAJB7Q7Z6W7 309 aaPredicted RBP15.28■□□□□ 0.04
SNX6-210ENST00000557341 MFSD6LQ8IWD5 586 aa15.28■□□□□ 0.04
SNX6-210ENST00000557341 FAM200AQ8TCP9 573 aa15.28■□□□□ 0.04
SNX6-210ENST00000557341 SPPL2BQ8TCT7 592 aa15.28■□□□□ 0.04
SNX6-210ENST00000557341 KCNG4Q8TDN1 519 aa15.28■□□□□ 0.04
SNX6-210ENST00000557341 CACTINQ8WUQ7 758 aaKnown RBP15.28■□□□□ 0.04
SNX6-210ENST00000557341 CLDN23Q96B33 292 aa15.28■□□□□ 0.04
SNX6-210ENST00000557341 CBWD1Q9BRT8 395 aa15.28■□□□□ 0.04
SNX6-210ENST00000557341 LRRC27Q9C0I9 530 aa15.28■□□□□ 0.04
SNX6-210ENST00000557341 CUEDC2Q9H467 287 aa15.28■□□□□ 0.04
SNX6-210ENST00000557341 FBXO4Q9UKT5 387 aa15.28■□□□□ 0.04
SNX6-210ENST00000557341 MYO16Q9Y6X6 1858 aa15.28■□□□□ 0.04
SNX6-210ENST00000557341 OTOGLQ3ZCN5 2332 aa15.27■□□□□ 0.04
SNX6-210ENST00000557341 KIAA1549LQ6ZVL6 1849 aa15.27■□□□□ 0.04
SNX6-210ENST00000557341 ZNF263O14978 683 aa15.27■□□□□ 0.04
SNX6-210ENST00000557341 KIAA0391O15091 583 aaKnown RBP15.27■□□□□ 0.04
SNX6-210ENST00000557341 EXTL3O43909 919 aa15.27■□□□□ 0.04
SNX6-210ENST00000557341 YEATS4O95619 227 aa15.27■□□□□ 0.04
SNX6-210ENST00000557341 ATF6P18850 670 aa15.27■□□□□ 0.04
SNX6-210ENST00000557341 GABRR2P28476 465 aa15.27■□□□□ 0.04
SNX6-210ENST00000557341 ZNF528Q3MIS6 628 aa15.27■□□□□ 0.04
SNX6-210ENST00000557341 ARHGAP15Q53QZ3 475 aa15.27■□□□□ 0.04
SNX6-210ENST00000557341 STXBP5Q5T5C0 1151 aa15.27■□□□□ 0.04
SNX6-210ENST00000557341 GAREM2Q75VX8 874 aa15.27■□□□□ 0.04
SNX6-210ENST00000557341 YAF2Q8IY57 180 aa15.27■□□□□ 0.04
SNX6-210ENST00000557341 DCP1BQ8IZD4 617 aaKnown RBP15.27■□□□□ 0.04
SNX6-210ENST00000557341 MAML2Q8IZL2 1156 aaPredicted RBP15.27■□□□□ 0.04
SNX6-210ENST00000557341 LRRC52Q8N7C0 313 aa15.27■□□□□ 0.04
SNX6-210ENST00000557341 C1orf127Q8N9H9 656 aa15.27■□□□□ 0.04
SNX6-210ENST00000557341 ZSWIM2Q8NEG5 633 aa15.27■□□□□ 0.04
SNX6-210ENST00000557341 NOC3LQ8WTT2 800 aaKnown RBP15.27■□□□□ 0.04
SNX6-210ENST00000557341 BORCS6Q96GS4 357 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms