RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 VNN1O95497 513 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 ACO1P21399 889 aaKnown RBP12.02□□□□□ -0.49
SRP54-213ENST00000556994 ADRA1DP25100 572 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 PCK1P35558 622 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 PTGER2P43116 358 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 NLRP11P59045 1033 aaKnown RBP12.02□□□□□ -0.49
SRP54-213ENST00000556994 GPX6P59796 221 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 RPS6P62753 249 aaKnown RBP12.02□□□□□ -0.49
SRP54-213ENST00000556994 FKBP1AP62942 108 aaKnown RBP12.02□□□□□ -0.49
SRP54-213ENST00000556994 NR1H3Q13133 447 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 TFDP1Q14186 410 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 PGM5Q15124 567 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 EAPPQ56P03 285 aaPredicted RBP12.02□□□□□ -0.49
SRP54-213ENST00000556994 PLEKHA7Q6IQ23 1121 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 RFWD3Q6PCD5 774 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 C15orf39Q6ZRI6 1047 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 ZNF677Q86XU0 584 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 ABRAQ8N0Z2 381 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 ALLCQ8N6M5 410 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 RFWD2Q8NHY2 731 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 FEZF2Q8TBJ5 459 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 INPP5DQ92835 1189 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 TMOD2Q9NZR1 351 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 GABBR1Q9UBS5 961 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 SMG5Q9UPR3 1016 aaKnown RBP12.02□□□□□ -0.49
SRP54-213ENST00000556994 YDJCA8MPS7 323 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 WDR64B1ANS9 1081 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 SGK1O00141 431 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 ZNF862O60290 1169 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 LINGO3P0C6S8 592 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 PTDSS1P48651 473 aaKnown RBP12.02□□□□□ -0.49
SRP54-213ENST00000556994 BPIFB4P59827 614 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 DYNLT1P63172 113 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 SEZ6Q53EL9 994 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 CDCA2Q69YH5 1023 aaPredicted RBP12.02□□□□□ -0.49
SRP54-213ENST00000556994 ANO7Q6IWH7 933 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 TDRPQ86YL5 185 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 SPIRE2Q8WWL2 714 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 ZBTB45Q96K62 511 aaPredicted RBP12.02□□□□□ -0.49
SRP54-213ENST00000556994 TTC25Q96NG3 672 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 SENP7Q9BQF6 1050 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 TIPINQ9BVW5 301 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 CORO1CQ9ULV4 474 aaPredicted RBP12.02□□□□□ -0.49
SRP54-213ENST00000556994 LRRC42Q9Y546 428 aa12.02□□□□□ -0.49
SRP54-213ENST00000556994 THSD7AQ9UPZ6 1657 aa12.01□□□□□ -0.49
SRP54-213ENST00000556994 A0A0G2JND7 137 aa12.01□□□□□ -0.49
SRP54-213ENST00000556994 ALOX15BO15296 676 aa12.01□□□□□ -0.49
SRP54-213ENST00000556994 TJP3O95049 919 aa12.01□□□□□ -0.49
SRP54-213ENST00000556994 C4BPAP04003 597 aaKnown RBP12.01□□□□□ -0.49
SRP54-213ENST00000556994 CETN2P41208 172 aa12.01□□□□□ -0.49
SRP54-213ENST00000556994 LMNB2Q03252 620 aa12.01□□□□□ -0.49
SRP54-213ENST00000556994 ZNF252P-AS1Q0IIN9 211 aa12.01□□□□□ -0.49
SRP54-213ENST00000556994 CUL2Q13617 745 aa12.01□□□□□ -0.49
SRP54-213ENST00000556994 ZACNQ401N2 412 aa12.01□□□□□ -0.49
SRP54-213ENST00000556994 MSS51Q4VC12 460 aa12.01□□□□□ -0.49
SRP54-213ENST00000556994 ZBTB41Q5SVQ8 909 aa12.01□□□□□ -0.49
SRP54-213ENST00000556994 RNASEH2BQ5TBB1 312 aaKnown RBP12.01□□□□□ -0.49
SRP54-213ENST00000556994 RGS9BPQ6ZS82 235 aa12.01□□□□□ -0.49
SRP54-213ENST00000556994 NIPA1Q7RTP0 329 aa12.01□□□□□ -0.49
SRP54-213ENST00000556994 RCOR2Q8IZ40 523 aa12.01□□□□□ -0.49
SRP54-213ENST00000556994 MCEEQ96PE7 176 aa12.01□□□□□ -0.49
SRP54-213ENST00000556994 RMDN3Q96TC7 470 aa12.01□□□□□ -0.49
SRP54-213ENST00000556994 MIPEPQ99797 713 aa12.01□□□□□ -0.49
SRP54-213ENST00000556994 MOV10L1Q9BXT6 1211 aaKnown RBP12.01□□□□□ -0.49
SRP54-213ENST00000556994 ZNF341Q9BYN7 854 aa12.01□□□□□ -0.49
SRP54-213ENST00000556994 CYLDQ9NQC7 956 aa12.01□□□□□ -0.49
SRP54-213ENST00000556994 ANKEF1Q9NU02 776 aa12.01□□□□□ -0.49
SRP54-213ENST00000556994 KANSL3Q9P2N6 904 aa12.01□□□□□ -0.49
SRP54-213ENST00000556994 SLC17A7Q9P2U7 560 aa12.01□□□□□ -0.49
SRP54-213ENST00000556994 PSMC3IPQ9P2W1 217 aaPredicted RBP12.01□□□□□ -0.49
SRP54-213ENST00000556994 ZNF70Q9UC06 446 aaPredicted RBP12.01□□□□□ -0.49
SRP54-213ENST00000556994 ZNF541Q9H0D2 1346 aa12.01□□□□□ -0.49
SRP54-213ENST00000556994 LRRD1A4D1F6 860 aa12□□□□□ -0.49
SRP54-213ENST00000556994 EME2A4GXA9 379 aaPredicted RBP12□□□□□ -0.49
SRP54-213ENST00000556994 CFAP69A5D8W1 941 aa12□□□□□ -0.49
SRP54-213ENST00000556994 DPPA5A6NC42 116 aa12□□□□□ -0.49
SRP54-213ENST00000556994 ZC3H11AO75152 810 aaKnown RBP eCLIP12□□□□□ -0.497e-8■□□□□ 9.3
SRP54-213ENST00000556994 PTPN4P29074 926 aa12□□□□□ -0.49
SRP54-213ENST00000556994 CHRNA5P30532 468 aa12□□□□□ -0.49
SRP54-213ENST00000556994 LIG4P49917 911 aa12□□□□□ -0.49
SRP54-213ENST00000556994 TUBP50607 506 aa12□□□□□ -0.49
SRP54-213ENST00000556994 OGDHQ02218 1023 aa12□□□□□ -0.49
SRP54-213ENST00000556994 GRIK3Q13003 919 aa12□□□□□ -0.49
SRP54-213ENST00000556994 SEPT7Q16181 437 aaKnown RBP12□□□□□ -0.49
SRP54-213ENST00000556994 KHDC1Q4VXA5 237 aaKnown RBP12□□□□□ -0.49
SRP54-213ENST00000556994 ZNF394Q53GI3 561 aa12□□□□□ -0.49
SRP54-213ENST00000556994 FNBP1LQ5T0N5 605 aa12□□□□□ -0.49
SRP54-213ENST00000556994 ANKRD22Q5VYY1 191 aa12□□□□□ -0.49
SRP54-213ENST00000556994 SPOCD1Q6ZMY3 1216 aa12□□□□□ -0.49
SRP54-213ENST00000556994 CENPUQ71F23 418 aa12□□□□□ -0.49
SRP54-213ENST00000556994 NLGN1Q8N2Q7 840 aa12□□□□□ -0.49
SRP54-213ENST00000556994 RBBP8NLQ8NC74 664 aaPredicted RBP12□□□□□ -0.49
SRP54-213ENST00000556994 ARMC2Q8NEN0 867 aa12□□□□□ -0.49
SRP54-213ENST00000556994 TCP10LQ8TDR4 215 aa12□□□□□ -0.49
SRP54-213ENST00000556994 NTPCRQ9BSD7 190 aaKnown RBP12□□□□□ -0.49
SRP54-213ENST00000556994 FOXP3Q9BZS1 431 aa12□□□□□ -0.49
SRP54-213ENST00000556994 PARVAQ9NVD7 372 aa12□□□□□ -0.49
SRP54-213ENST00000556994 ZFATQ9P243 1243 aa12□□□□□ -0.49
SRP54-213ENST00000556994 CLUHO75153 1309 aa12□□□□□ -0.49
SRP54-213ENST00000556994 SPDYE2BA6NHP3 402 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms