RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 ERVFC1P60507 584 aa18.63■□□□□ 0.57
TUBB3-211ENST00000556536 CAMK1Q14012 370 aa18.63■□□□□ 0.57
TUBB3-211ENST00000556536 USP41Q3LFD5 358 aa18.63■□□□□ 0.57
TUBB3-211ENST00000556536 VARS2Q5ST30 1063 aaKnown RBP18.63■□□□□ 0.57
TUBB3-211ENST00000556536 IQCEQ6IPM2 695 aa18.63■□□□□ 0.57
TUBB3-211ENST00000556536 DPH6Q7L8W6 267 aa18.63■□□□□ 0.57
TUBB3-211ENST00000556536 ADGRF2Q8IZF7 708 aa18.63■□□□□ 0.57
TUBB3-211ENST00000556536 GDPD5Q8WTR4 605 aa18.63■□□□□ 0.57
TUBB3-211ENST00000556536 AUTS2Q8WXX7 1259 aa18.63■□□□□ 0.57
TUBB3-211ENST00000556536 ZBP1Q9H171 429 aa18.63■□□□□ 0.57
TUBB3-211ENST00000556536 GRPEL1Q9HAV7 217 aa18.63■□□□□ 0.57
TUBB3-211ENST00000556536 THEGQ9P2T0 379 aa18.63■□□□□ 0.57
TUBB3-211ENST00000556536 PUF60Q9UHX1 559 aaKnown RBP18.63■□□□□ 0.57
TUBB3-211ENST00000556536 DNAJC12Q9UKB3 198 aa18.63■□□□□ 0.57
TUBB3-211ENST00000556536 NME7Q9Y5B8 376 aa18.63■□□□□ 0.57
TUBB3-211ENST00000556536 FHOD1Q9Y613 1164 aa18.63■□□□□ 0.57
TUBB3-211ENST00000556536 TACC1O75410 805 aa18.62■□□□□ 0.57
TUBB3-211ENST00000556536 TPM3P06753 285 aa18.62■□□□□ 0.57
TUBB3-211ENST00000556536 UCHL3P15374 230 aa18.62■□□□□ 0.57
TUBB3-211ENST00000556536 CD58P19256 250 aa18.62■□□□□ 0.57
TUBB3-211ENST00000556536 ACO1P21399 889 aaKnown RBP18.62■□□□□ 0.57
TUBB3-211ENST00000556536 WARSP23381 471 aaKnown RBP18.62■□□□□ 0.57
TUBB3-211ENST00000556536 DSG1Q02413 1049 aa18.62■□□□□ 0.57
TUBB3-211ENST00000556536 GCNT1Q02742 428 aa18.62■□□□□ 0.57
TUBB3-211ENST00000556536 UBE3AQ05086 875 aa18.62■□□□□ 0.57
TUBB3-211ENST00000556536 MRPL58Q14197 206 aaKnown RBP18.62■□□□□ 0.57
TUBB3-211ENST00000556536 KIAA0319Q5VV43 1072 aa18.62■□□□□ 0.57
TUBB3-211ENST00000556536 OVOS1Q6IE37 1185 aa18.62■□□□□ 0.57
TUBB3-211ENST00000556536 PRSS55Q6UWB4 352 aaPredicted RBP18.62■□□□□ 0.57
TUBB3-211ENST00000556536 UBR7Q8N806 425 aa18.62■□□□□ 0.57
TUBB3-211ENST00000556536 NEK11Q8NG66 645 aa18.62■□□□□ 0.57
TUBB3-211ENST00000556536 RIN2Q8WYP3 895 aaPredicted RBP18.62■□□□□ 0.57
TUBB3-211ENST00000556536 FAXDC2Q96IV6 333 aa18.62■□□□□ 0.57
TUBB3-211ENST00000556536 ASB2Q96Q27 587 aa18.62■□□□□ 0.57
TUBB3-211ENST00000556536 RTP3Q9BQQ7 232 aa18.62■□□□□ 0.57
TUBB3-211ENST00000556536 NAA15Q9BXJ9 866 aaKnown RBP18.62■□□□□ 0.57
TUBB3-211ENST00000556536 CYP3A43Q9HB55 503 aa18.62■□□□□ 0.57
TUBB3-211ENST00000556536 DSEQ9UL01 958 aa18.62■□□□□ 0.57
TUBB3-211ENST00000556536 PCDHGC5Q9Y5F6 944 aa18.62■□□□□ 0.57
TUBB3-211ENST00000556536 ARHGEF37A1IGU5 675 aa18.61■□□□□ 0.57
TUBB3-211ENST00000556536 C2CD2LO14523 706 aa18.61■□□□□ 0.57
TUBB3-211ENST00000556536 GABRDO14764 452 aa18.61■□□□□ 0.57
TUBB3-211ENST00000556536 OAZ2O95190 189 aa18.61■□□□□ 0.57
TUBB3-211ENST00000556536 CTSAP10619 480 aa18.61■□□□□ 0.57
TUBB3-211ENST00000556536 TBXAS1P24557 533 aaPredicted RBP18.61■□□□□ 0.57
TUBB3-211ENST00000556536 LMO2P25791 158 aa18.61■□□□□ 0.57
TUBB3-211ENST00000556536 GLUD2P49448 558 aa18.61■□□□□ 0.57
TUBB3-211ENST00000556536 POLR2FP61218 127 aaKnown RBP18.61■□□□□ 0.57
TUBB3-211ENST00000556536 YWHAHQ04917 246 aaPredicted RBP18.61■□□□□ 0.57
TUBB3-211ENST00000556536 GSE1Q14687 1217 aa18.61■□□□□ 0.57
TUBB3-211ENST00000556536 ARHGAP44Q17R89 818 aa18.61■□□□□ 0.57
TUBB3-211ENST00000556536 KIAA1841Q6NSI8 718 aa18.61■□□□□ 0.57
TUBB3-211ENST00000556536 METTL23Q86XA0 190 aa18.61■□□□□ 0.57
TUBB3-211ENST00000556536 VSTM4Q8IW00 320 aa18.61■□□□□ 0.57
TUBB3-211ENST00000556536 TMEM86AQ8N2M4 240 aa18.61■□□□□ 0.57
TUBB3-211ENST00000556536 LNX1Q8TBB1 728 aaPredicted RBP18.61■□□□□ 0.57
TUBB3-211ENST00000556536 PPM1EQ8WY54 764 aa18.61■□□□□ 0.57
TUBB3-211ENST00000556536 CISHQ9NSE2 258 aa18.61■□□□□ 0.57
TUBB3-211ENST00000556536 STK39Q9UEW8 545 aa18.61■□□□□ 0.57
TUBB3-211ENST00000556536 HMGXB4Q9UGU5 601 aa18.61■□□□□ 0.57
TUBB3-211ENST00000556536 FSCN2O14926 492 aa18.6■□□□□ 0.57
TUBB3-211ENST00000556536 LPXNO60711 386 aa18.6■□□□□ 0.57
TUBB3-211ENST00000556536 LILRB3O75022 631 aa18.6■□□□□ 0.57
TUBB3-211ENST00000556536 URODP06132 367 aa18.6■□□□□ 0.57
TUBB3-211ENST00000556536 FAM163BP0C2L3 166 aa18.6■□□□□ 0.57
TUBB3-211ENST00000556536 IRS1P35568 1242 aa18.6■□□□□ 0.57
TUBB3-211ENST00000556536 MFAP3P55082 362 aa18.6■□□□□ 0.57
TUBB3-211ENST00000556536 INCA1Q0VD86 236 aa18.6■□□□□ 0.57
TUBB3-211ENST00000556536 ORC1Q13415 861 aa18.6■□□□□ 0.57
TUBB3-211ENST00000556536 PTPN14Q15678 1187 aa18.6■□□□□ 0.57
TUBB3-211ENST00000556536 RSPO2Q6UXX9 243 aaPredicted RBP18.6■□□□□ 0.57
TUBB3-211ENST00000556536 TMC7Q7Z402 723 aa18.6■□□□□ 0.57
TUBB3-211ENST00000556536 OR6B3Q8NGW1 331 aa18.6■□□□□ 0.57
TUBB3-211ENST00000556536 ADAMTS19Q8TE59 1207 aa18.6■□□□□ 0.57
TUBB3-211ENST00000556536 WHAMMQ8TF30 809 aa18.6■□□□□ 0.57
TUBB3-211ENST00000556536 PIK3R5Q8WYR1 880 aa18.6■□□□□ 0.57
TUBB3-211ENST00000556536 TWNKQ96RR1 684 aa18.6■□□□□ 0.57
TUBB3-211ENST00000556536 TCF25Q9BQ70 676 aa18.6■□□□□ 0.57
TUBB3-211ENST00000556536 GPR88Q9GZN0 384 aa18.6■□□□□ 0.57
TUBB3-211ENST00000556536 SNX25Q9H3E2 840 aa18.6■□□□□ 0.57
TUBB3-211ENST00000556536 NLRC4Q9NPP4 1024 aa18.6■□□□□ 0.57
TUBB3-211ENST00000556536 TLR9Q9NR96 1032 aa18.6■□□□□ 0.57
TUBB3-211ENST00000556536 DDX43Q9NXZ2 648 aaKnown RBP18.6■□□□□ 0.57
TUBB3-211ENST00000556536 ADAM12O43184 909 aa18.59■□□□□ 0.57
TUBB3-211ENST00000556536 TBC1D4O60343 1298 aa18.59■□□□□ 0.57
TUBB3-211ENST00000556536 ADCY5O95622 1261 aa18.59■□□□□ 0.57
TUBB3-211ENST00000556536 CXCL14O95715 111 aa18.59■□□□□ 0.57
TUBB3-211ENST00000556536 PDGFRBP09619 1106 aa18.59■□□□□ 0.57
TUBB3-211ENST00000556536 PNMA6AP0CW24 399 aaPredicted RBP18.59■□□□□ 0.57
TUBB3-211ENST00000556536 RPL17P18621 184 aaKnown RBP18.59■□□□□ 0.57
TUBB3-211ENST00000556536 ACAT1P24752 427 aaKnown RBP18.59■□□□□ 0.57
TUBB3-211ENST00000556536 GNL1P36915 607 aaPredicted RBP18.59■□□□□ 0.57
TUBB3-211ENST00000556536 LHX1P48742 406 aa18.59■□□□□ 0.57
TUBB3-211ENST00000556536 NDST1P52848 882 aa18.59■□□□□ 0.57
TUBB3-211ENST00000556536 MRPS5P82675 430 aaKnown RBP18.59■□□□□ 0.57
TUBB3-211ENST00000556536 RAPGEF1Q13905 1077 aa18.59■□□□□ 0.57
TUBB3-211ENST00000556536 PSMD5Q16401 504 aa18.59■□□□□ 0.57
TUBB3-211ENST00000556536 PLPP4Q5VZY2 271 aa18.59■□□□□ 0.57
TUBB3-211ENST00000556536 ANKS3Q6ZW76 656 aa18.59■□□□□ 0.57
TUBB3-211ENST00000556536 ENOSF1Q7L5Y1 443 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms