RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 CACTINQ8WUQ7 758 aaKnown RBP8.74□□□□□ -1.01
VTI1B-206ENST00000556461 ZNF516Q92618 1163 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 FGF14Q92915 247 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 PBXIP1Q96AQ6 731 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 CCDC127Q96BQ5 260 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 ZNF560Q96MR9 790 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 CORO1BQ9BR76 489 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 ZCWPW1Q9H0M4 648 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 KCTD10Q9H3F6 313 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 TMLHEQ9NVH6 421 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 DMAC2Q9NW81 257 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 CDH7Q9ULB5 785 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 NUMBLQ9Y6R0 609 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 DMDP11532 3685 aa8.74□□□□□ -1.01
VTI1B-206ENST00000556461 CST3P01034 146 aaPredicted RBP8.73□□□□□ -1.01
VTI1B-206ENST00000556461 TMEM191BP0C7N4 346 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 PTPN2P17706 415 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 PAX3P23760 479 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 ACAT1P24752 427 aaKnown RBP8.73□□□□□ -1.01
VTI1B-206ENST00000556461 SNRPFP62306 86 aaKnown RBP8.73□□□□□ -1.01
VTI1B-206ENST00000556461 RBP5P82980 135 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 PSMD2Q13200 908 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 PNOCQ13519 176 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 SNW1Q13573 536 aaKnown RBP8.73□□□□□ -1.01
VTI1B-206ENST00000556461 DUOXA2Q1HG44 320 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 HS2ST1Q7LGA3 356 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 TRAPPC11Q7Z392 1133 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 METTL23Q86XA0 190 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 WDR49Q8IV35 697 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 LRRC52Q8N7C0 313 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 ENGASEQ8NFI3 743 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 ERCC4Q92889 916 aaPredicted RBP8.73□□□□□ -1.01
VTI1B-206ENST00000556461 ELMO3Q96BJ8 720 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 MCRS1Q96EZ8 462 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 ANKRD36BP1Q96IX9 119 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 MFSD14AQ96MC6 490 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 ZSWIM3Q96MP5 696 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 CGRRF1Q99675 332 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 LRRC3Q9BY71 257 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 PLA2G2FQ9BZM2 168 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 KIAA1586Q9HCI6 787 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 ZNF334Q9HCZ1 680 aaPredicted RBP8.73□□□□□ -1.01
VTI1B-206ENST00000556461 AVENQ9NQS1 362 aaPredicted RBP8.73□□□□□ -1.01
VTI1B-206ENST00000556461 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.73□□□□□ -1.01
VTI1B-206ENST00000556461 IGSF9Q9P2J2 1179 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 ITGA11Q9UKX5 1188 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 DUSP12Q9UNI6 340 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 MAPK8IP1Q9UQF2 711 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 MRPS23Q9Y3D9 190 aaKnown RBP8.73□□□□□ -1.01
VTI1B-206ENST00000556461 NME7Q9Y5B8 376 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 SNX9Q9Y5X1 595 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 CACNA1HO95180 2353 aa8.73□□□□□ -1.01
VTI1B-206ENST00000556461 LRRIQ3A6PVS8 624 aaPredicted RBP8.72□□□□□ -1.01
VTI1B-206ENST00000556461 EXOC3O60645 756 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 GADD45BO75293 160 aaPredicted RBP8.72□□□□□ -1.01
VTI1B-206ENST00000556461 RHOBTB3O94955 611 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 TNNC2P02585 160 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 MYL1P05976 194 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 CFHP08603 1231 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 NPR3P17342 541 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 ATF6P18850 670 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 TNNI1P19237 187 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 FCARP24071 287 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 PNPLA4P41247 253 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 GPR15P49685 360 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 DLG4P78352 724 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 SOWAHAQ2M3V2 549 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 C1orf220Q5T0J3 134 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 LIMS2Q7Z4I7 341 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 TMC8Q8IU68 726 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 SMYD4Q8IYR2 804 aaPredicted RBP8.72□□□□□ -1.01
VTI1B-206ENST00000556461 FBXL6Q8N531 539 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 STKLD1Q8NE28 680 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 SHKBP1Q8TBC3 707 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 GPR152Q8TDT2 470 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 KBTBD7Q8WVZ9 684 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 HPDLQ96IR7 371 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 PKMYT1Q99640 499 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 KXD1Q9BQD3 176 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 LPIN3Q9BQK8 851 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 OXCT2Q9BYC2 517 aaPredicted RBP8.72□□□□□ -1.01
VTI1B-206ENST00000556461 GDAP2Q9NXN4 497 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 DDX43Q9NXZ2 648 aaKnown RBP8.72□□□□□ -1.01
VTI1B-206ENST00000556461 DSEQ9UL01 958 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 MAFFQ9ULX9 164 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 NCANO14594 1321 aa8.72□□□□□ -1.01
VTI1B-206ENST00000556461 MYO15AQ9UKN7 3530 aa8.71□□□□□ -1.01
VTI1B-206ENST00000556461 MYBPHLA2RUH7 354 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 KRBA1A5PL33 1030 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 PDXKO00764 312 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 GABRDO14764 452 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 HUS1O60921 280 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 ATP2C2O75185 946 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 NR3C1P04150 777 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 HAPLN1P10915 354 aaPredicted RBP8.71□□□□□ -1.02
VTI1B-206ENST00000556461 MYL4P12829 197 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 LMO2P25791 158 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 EPHA5P54756 1037 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 MYL6P60660 151 aa8.71□□□□□ -1.02
VTI1B-206ENST00000556461 GPC5P78333 572 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms