RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 TNNT3P45378 269 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-241ENST00000556374 STX17P56962 302 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 KRT83P78385 493 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 KCNJ12Q14500 433 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 SMC1AQ14683 1233 aaKnown RBP4.86□□□□□ -1.63
ATXN3-241ENST00000556374 HLFQ16534 295 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 FKBP15Q5T1M5 1219 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 SLFN13Q68D06 897 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 CC2D1AQ6P1N0 951 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-241ENST00000556374 TMTC3Q6ZXV5 915 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 USP50Q70EL3 339 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-241ENST00000556374 DZIP1Q86YF9 867 aaKnown RBP4.86□□□□□ -1.63
ATXN3-241ENST00000556374 GRAMD1CQ8IYS0 662 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 TC2NQ8N9U0 490 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 TMEM145Q8NBT3 493 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 ARRDC4Q8NCT1 418 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 DNERQ8NFT8 737 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 IQCDQ96DY2 449 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 PAGE5Q96GU1 130 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 RPGRIP1Q96KN7 1286 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 DESI2Q9BSY9 194 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 PHF20Q9BVI0 1012 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 TSGA10Q9BZW7 698 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 KAT14Q9H8E8 782 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 ZNF408Q9H9D4 720 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 SEC61A2Q9H9S3 476 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 ZNF287Q9HBT7 754 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 MSL2Q9HCI7 577 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 DLL4Q9NR61 685 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 ZNF277Q9NRM2 450 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-241ENST00000556374 INTS13Q9NVM9 706 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 RNF186Q9NXI6 227 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 CLDND1Q9NY35 253 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 TESMINQ9Y4I5 508 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 ZNF536O15090 1300 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 HTTP42858 3142 aa4.86□□□□□ -1.63
ATXN3-241ENST00000556374 A0A0C4DFX4 3053 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 KRT86O43790 486 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 IGSF3O75054 1194 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 ZRANB2O95218 330 aaKnown RBP eCLIP4.85□□□□□ -1.63
ATXN3-241ENST00000556374 FGFR1OPO95684 399 aaKnown RBP4.85□□□□□ -1.63
ATXN3-241ENST00000556374 EEF1GP26641 437 aaKnown RBP4.85□□□□□ -1.63
ATXN3-241ENST00000556374 HOXA7P31268 230 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-241ENST00000556374 CYP2C19P33261 490 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 GUCY1A2P33402 732 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 MCM7P33993 719 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 TOB1P50616 345 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-241ENST00000556374 COPB1P53618 953 aaKnown RBP4.85□□□□□ -1.63
ATXN3-241ENST00000556374 EIF5P55010 431 aaKnown RBP4.85□□□□□ -1.63
ATXN3-241ENST00000556374 HUNKP57058 714 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 PPP2R2AP63151 447 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 GSTO1P78417 241 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 ZXDAP98168 799 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 ATP2C1P98194 919 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-241ENST00000556374 UBXN1Q04323 297 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 CHRNDQ07001 517 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 RBL2Q08999 1139 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 GOLGA8FQ08AF8 430 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 GOLGA8DPQ0D2H9 430 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 NFATC3Q12968 1075 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 UBE4AQ14139 1066 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 ZNF174Q15697 407 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 ZNF658Q5TYW1 1059 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-241ENST00000556374 SUSD4Q5VX71 490 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 ARL6IP4Q66PJ3 421 aaKnown RBP4.85□□□□□ -1.63
ATXN3-241ENST00000556374 SPTY2D1Q68D10 685 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-241ENST00000556374 GALNT17Q6IS24 598 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 STYK1Q6J9G0 422 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 FBXO46Q6PJ61 603 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-241ENST00000556374 TRIM65Q6PJ69 517 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 ARHGEF18Q6ZSZ5 1173 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 TMEM139Q8IV31 216 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 ZNF34Q8IZ26 560 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 SLC35F6Q8N357 371 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 SLC43A3Q8NBI5 491 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 ST13P5Q8NFI4 369 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-241ENST00000556374 SDR42E1Q8WUS8 393 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 DCAF4Q8WV16 495 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 NELFBQ8WX92 580 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 KISS1RQ969F8 398 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-241ENST00000556374 C8orf49Q96NF6 230 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 GMLQ99445 158 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.85□□□□□ -1.63
ATXN3-241ENST00000556374 NUP58Q9BVL2 599 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 GLIS2Q9BZE0 524 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-241ENST00000556374 NYXQ9GZU5 481 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 HSD3B7Q9H2F3 369 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 CUEDC2Q9H467 287 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 SH3GLB2Q9NR46 395 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 SAMSN1Q9NSI8 373 aaKnown RBP4.85□□□□□ -1.63
ATXN3-241ENST00000556374 ABHD10Q9NUJ1 306 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 TCP11L1Q9NUJ3 509 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 EXOC1Q9NV70 894 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 ZNF446Q9NWS9 450 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 TAB2Q9NYJ8 693 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 PPP4R1LQ9P1A2 415 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 ADD3Q9UEY8 706 aaKnown RBP4.85□□□□□ -1.63
ATXN3-241ENST00000556374 LIMA1Q9UHB6 759 aaKnown RBP4.85□□□□□ -1.63
ATXN3-241ENST00000556374 NARFQ9UHQ1 456 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 PUF60Q9UHX1 559 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms