RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, human

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-219	ENST00000555906	CRELD2	Q6UXH1	353 aa	Predicted RBP	21.33	■■□□□ 1.01
PRKCH-219	ENST00000555906	ITIH5	Q86UX2	942 aa		21.33	■■□□□ 1.01
PRKCH-219	ENST00000555906	EFCAB13	Q8IY85	973 aa		21.33	■■□□□ 1.01
PRKCH-219	ENST00000555906	DNAJC19	Q96DA6	116 aa		21.33	■■□□□ 1.01
PRKCH-219	ENST00000555906	MSANTD3	Q96H12	275 aa		21.33	■■□□□ 1.01
PRKCH-219	ENST00000555906	ZCWPW1	Q9H0M4	648 aa		21.33	■■□□□ 1.01
PRKCH-219	ENST00000555906	MRPL44	Q9H9J2	332 aa	Known RBP	21.33	■■□□□ 1.01
PRKCH-219	ENST00000555906	OLFML3	Q9NRN5	406 aa		21.33	■■□□□ 1.01
PRKCH-219	ENST00000555906	DPP3	Q9NY33	737 aa		21.33	■■□□□ 1.01
PRKCH-219	ENST00000555906	EXOC7	Q9UPT5	735 aa		21.33	■■□□□ 1.01
PRKCH-219	ENST00000555906	SLC27A5	Q9Y2P5	690 aa		21.33	■■□□□ 1.01
PRKCH-219	ENST00000555906	PIAS3	Q9Y6X2	628 aa		21.33	■■□□□ 1.01
PRKCH-219	ENST00000555906	HEPACAM2	A8MVW5	462 aa		21.32	■■□□□ 1
PRKCH-219	ENST00000555906	ZNF263	O14978	683 aa		21.32	■■□□□ 1
PRKCH-219	ENST00000555906	ADSS	P30520	456 aa		21.32	■■□□□ 1
PRKCH-219	ENST00000555906	FOXK2	Q01167	660 aa		21.32	■■□□□ 1
PRKCH-219	ENST00000555906	CSTF1	Q05048	431 aa	Known RBP	21.32	■■□□□ 1
PRKCH-219	ENST00000555906	FCHO2	Q0JRZ9	810 aa		21.32	■■□□□ 1
PRKCH-219	ENST00000555906	SLC39A12	Q504Y0	691 aa		21.32	■■□□□ 1
PRKCH-219	ENST00000555906	L1TD1	Q5T7N2	865 aa	Known RBP	21.32	■■□□□ 1
PRKCH-219	ENST00000555906	CCDC73	Q6ZRK6	1079 aa		21.32	■■□□□ 1
PRKCH-219	ENST00000555906	SV2B	Q7L1I2	683 aa		21.32	■■□□□ 1
PRKCH-219	ENST00000555906	METTL23	Q86XA0	190 aa		21.32	■■□□□ 1
PRKCH-219	ENST00000555906	C2orf15	Q8WU43	125 aa	Known RBP	21.32	■■□□□ 1
PRKCH-219	ENST00000555906	NELL1	Q92832	810 aa		21.32	■■□□□ 1
PRKCH-219	ENST00000555906	INTS4	Q96HW7	963 aa	Known RBP	21.32	■■□□□ 1
PRKCH-219	ENST00000555906	ZNF560	Q96MR9	790 aa		21.32	■■□□□ 1
PRKCH-219	ENST00000555906	CLIC6	Q96NY7	704 aa		21.32	■■□□□ 1
PRKCH-219	ENST00000555906	PYM1	Q9BRP8	204 aa	Known RBP	21.32	■■□□□ 1
PRKCH-219	ENST00000555906	IKZF4	Q9H2S9	585 aa		21.32	■■□□□ 1
PRKCH-219	ENST00000555906	CHRD	Q9H2X0	955 aa		21.32	■■□□□ 1
PRKCH-219	ENST00000555906	NDRG2	Q9UN36	371 aa	Known RBP	21.32	■■□□□ 1
PRKCH-219	ENST00000555906	CEP250	Q9BV73	2442 aa		21.31	■■□□□ 1
PRKCH-219	ENST00000555906	CYB561D2	O14569	222 aa		21.31	■■□□□ 1
PRKCH-219	ENST00000555906	TUFM	P49411	452 aa	Known RBP	21.31	■■□□□ 1
PRKCH-219	ENST00000555906	MLLT6	P55198	1093 aa	Predicted RBP	21.31	■■□□□ 1
PRKCH-219	ENST00000555906	SMARCB1	Q12824	385 aa		21.31	■■□□□ 1
PRKCH-219	ENST00000555906	ALCAM	Q13740	583 aa		21.31	■■□□□ 1
PRKCH-219	ENST00000555906	VEPH1	Q14D04	833 aa		21.31	■■□□□ 1
PRKCH-219	ENST00000555906	SV2C	Q496J9	727 aa		21.31	■■□□□ 1
PRKCH-219	ENST00000555906	STXBP5	Q5T5C0	1151 aa		21.31	■■□□□ 1
PRKCH-219	ENST00000555906	FAM173B	Q6P4H8	233 aa		21.31	■■□□□ 1
PRKCH-219	ENST00000555906	GAREM2	Q75VX8	874 aa		21.31	■■□□□ 1
PRKCH-219	ENST00000555906	BRSK2	Q8IWQ3	736 aa		21.31	■■□□□ 1
PRKCH-219	ENST00000555906	SUMF1	Q8NBK3	374 aa		21.31	■■□□□ 1
PRKCH-219	ENST00000555906	RUBCN	Q92622	972 aa		21.31	■■□□□ 1
PRKCH-219	ENST00000555906	RSPRY1	Q96DX4	576 aa		21.31	■■□□□ 1
PRKCH-219	ENST00000555906	ACCS	Q96QU6	501 aa		21.31	■■□□□ 1
PRKCH-219	ENST00000555906	SEPT5	Q99719	369 aa	Predicted RBP	21.31	■■□□□ 1
PRKCH-219	ENST00000555906	MKNK1	Q9BUB5	465 aa		21.31	■■□□□ 1
PRKCH-219	ENST00000555906	DNAH14	Q0VDD8	3507 aa		21.3	■■□□□ 1
PRKCH-219	ENST00000555906	FRMD3	A2A2Y4	597 aa		21.3	■■□□□ 1
PRKCH-219	ENST00000555906	CHAD	O15335	359 aa		21.3	■■□□□ 1
PRKCH-219	ENST00000555906	SOAT2	O75908	522 aa		21.3	■■□□□ 1
PRKCH-219	ENST00000555906	GCNT3	O95395	438 aa		21.3	■■□□□ 1
PRKCH-219	ENST00000555906	PNPLA4	P41247	253 aa		21.3	■■□□□ 1
PRKCH-219	ENST00000555906	STAT6	P42226	847 aa		21.3	■■□□□ 1
PRKCH-219	ENST00000555906	ID4	P47928	161 aa		21.3	■■□□□ 1
PRKCH-219	ENST00000555906	KCNA1	Q09470	495 aa		21.3	■■□□□ 1
PRKCH-219	ENST00000555906	MTAP	Q13126	283 aa		21.3	■■□□□ 1
PRKCH-219	ENST00000555906	C1orf228	Q6PIY5	440 aa		21.3	■■□□□ 1
PRKCH-219	ENST00000555906	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	21.3	■■□□□ 1
PRKCH-219	ENST00000555906	YAF2	Q8IY57	180 aa		21.3	■■□□□ 1
PRKCH-219	ENST00000555906	THEM5	Q8N1Q8	247 aa		21.3	■■□□□ 1
PRKCH-219	ENST00000555906	ZBTB44	Q8NCP5	570 aa		21.3	■■□□□ 1
PRKCH-219	ENST00000555906	SPPL2B	Q8TCT7	592 aa		21.3	■■□□□ 1
PRKCH-219	ENST00000555906	FAM3C	Q92520	227 aa		21.3	■■□□□ 1
PRKCH-219	ENST00000555906	HINFP	Q9BQA5	517 aa		21.3	■■□□□ 1
PRKCH-219	ENST00000555906	ZSCAN32	Q9NX65	697 aa		21.3	■■□□□ 1
PRKCH-219	ENST00000555906	MTMR6	Q9Y217	621 aa		21.3	■■□□□ 1
PRKCH-219	ENST00000555906	ZNF638	Q14966	1978 aa	Known RBP	21.29	■■□□□ 1
PRKCH-219	ENST00000555906	ATF6	P18850	670 aa		21.29	■■□□□ 1
PRKCH-219	ENST00000555906	GABRR2	P28476	465 aa		21.29	■■□□□ 1
PRKCH-219	ENST00000555906	CEBPZ	Q03701	1054 aa	Known RBP	21.29	■■□□□ 1
PRKCH-219	ENST00000555906	MGAT5B	Q3V5L5	792 aa		21.29	■■□□□ 1
PRKCH-219	ENST00000555906	ARHGAP15	Q53QZ3	475 aa		21.29	■■□□□ 1
PRKCH-219	ENST00000555906	USP28	Q96RU2	1077 aa		21.29	■■□□□ 1
PRKCH-219	ENST00000555906	LPIN3	Q9BQK8	851 aa		21.29	■■□□□ 1
PRKCH-219	ENST00000555906	FAM126A	Q9BYI3	521 aa	Predicted RBP	21.29	■■□□□ 1
PRKCH-219	ENST00000555906	ATXN3L	Q9H3M9	355 aa		21.29	■■□□□ 1
PRKCH-219	ENST00000555906	OBP2A	Q9NY56	170 aa		21.29	■■□□□ 1
PRKCH-219	ENST00000555906	KPNA7	A9QM74	516 aa		21.28	■■□□□ 1
PRKCH-219	ENST00000555906	LILRB5	O75023	590 aa		21.28	■■□□□ 1
PRKCH-219	ENST00000555906	GART	P22102	1010 aa		21.28	■■□□□ 1
PRKCH-219	ENST00000555906	WEE1	P30291	646 aa		21.28	■■□□□ 1
PRKCH-219	ENST00000555906	CDC25C	P30307	473 aa		21.28	■■□□□ 1
PRKCH-219	ENST00000555906	CASP5	P51878	434 aa		21.28	■■□□□ 1
PRKCH-219	ENST00000555906	SLC39A14	Q15043	492 aa		21.28	■■□□□ 1
PRKCH-219	ENST00000555906	GPR158	Q5T848	1215 aa		21.28	■■□□□ 1
PRKCH-219	ENST00000555906	WSCD1	Q658N2	575 aa		21.28	■■□□□ 1
PRKCH-219	ENST00000555906	MAMSTR	Q6ZN01	415 aa		21.28	■■□□□ 1
PRKCH-219	ENST00000555906	ERMP1	Q7Z2K6	904 aa		21.28	■■□□□ 1
PRKCH-219	ENST00000555906	ARID3B	Q8IVW6	561 aa	Predicted RBP	21.28	■■□□□ 1
PRKCH-219	ENST00000555906	FAM200A	Q8TCP9	573 aa		21.28	■■□□□ 1
PRKCH-219	ENST00000555906	CSGALNACT1	Q8TDX6	532 aa		21.28	■■□□□ 1
PRKCH-219	ENST00000555906	ATRIP	Q8WXE1	791 aa		21.28	■■□□□ 1
PRKCH-219	ENST00000555906	GCNA	Q96QF7	691 aa		21.28	■■□□□ 1
PRKCH-219	ENST00000555906	FAM213A	Q9BRX8	229 aa		21.28	■■□□□ 1
PRKCH-219	ENST00000555906	EPC1	Q9H2F5	836 aa		21.28	■■□□□ 1
PRKCH-219	ENST00000555906	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	21.28	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms