RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 CXCL16Q9H2A7 254 aa8.36□□□□□ -1.07
PCNX4-210ENST00000555740 DPP3Q9NY33 737 aa8.36□□□□□ -1.07
PCNX4-210ENST00000555740 TUBGCP4Q9UGJ1 667 aa8.36□□□□□ -1.07
PCNX4-210ENST00000555740 PCNTO95613 3336 aa8.36□□□□□ -1.07
PCNX4-210ENST00000555740 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.35□□□□□ -1.07
PCNX4-210ENST00000555740 ARL5CA6NH57 179 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 LRRC53A6NM62 1247 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 TMEM189-UBE2V1I3L0A0 370 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 ENPP3O14638 875 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 OFD1O75665 1012 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 GFPT2O94808 682 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 FAM163BP0C2L3 166 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 AKAP5P24588 427 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 RPL9P32969 192 aaKnown RBP8.35□□□□□ -1.07
PCNX4-210ENST00000555740 MLH1P40692 756 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 ASPAP45381 313 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 AARSP49588 968 aaKnown RBP eCLIP8.35□□□□□ -1.07
PCNX4-210ENST00000555740 DSC1Q08554 894 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 CUL2Q13617 745 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 C9orf57Q5W0N0 161 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 E4F1Q66K89 784 aaPredicted RBP8.35□□□□□ -1.07
PCNX4-210ENST00000555740 TTC39CQ8N584 583 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 OLIG1Q8TAK6 271 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 SPATA18Q8TC71 538 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 SYT11Q9BT88 431 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 IMPG2Q9BZV3 1241 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 SLC6A16Q9GZN6 736 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 CYP3A43Q9HB55 503 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 TMPRSS4Q9NRS4 437 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 KCND1Q9NSA2 647 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 PARP2Q9UGN5 583 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 DNAJC12Q9UKB3 198 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 ABHD14A-ACY1A0A1B0GW23 586 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 SSU72P8A0A1W2PR75 194 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 MEIS3P2A8K0S8 358 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 PTMAP06454 111 aaKnown RBP8.35□□□□□ -1.07
PCNX4-210ENST00000555740 FERP16591 822 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 ACO1P21399 889 aaKnown RBP8.35□□□□□ -1.07
PCNX4-210ENST00000555740 POLR2BP30876 1174 aaKnown RBP8.35□□□□□ -1.07
PCNX4-210ENST00000555740 SOX5P35711 763 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 STAT1P42224 750 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 MFAP3P55082 362 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 MYL6P60660 151 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 APBA1Q02410 837 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 INCA1Q0VD86 236 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 ZNF699Q32M78 642 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 WDR44Q5JSH3 913 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 CLLU1OSQ5K130 101 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 HGSNATQ68CP4 663 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 WDR59Q6PJI9 974 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 FAM71AQ8IYT1 594 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 TMEM199Q8N511 208 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 SCLYQ96I15 445 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 FAM84AQ96KN4 292 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 RPS6KC1Q96S38 1066 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 TSPAN10Q9H1Z9 355 aaPredicted RBP8.35□□□□□ -1.07
PCNX4-210ENST00000555740 RC3H2Q9HBD1 1191 aaKnown RBP8.35□□□□□ -1.07
PCNX4-210ENST00000555740 IL23AQ9NPF7 189 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 GDAP2Q9NXN4 497 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 NENFQ9UMX5 172 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 NUB1Q9Y5A7 615 aa8.35□□□□□ -1.07
PCNX4-210ENST00000555740 PHACTR2O75167 634 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 ITGB3P05106 788 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 ITGB8P26012 769 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 YWHAEP62258 255 aaKnown RBP8.34□□□□□ -1.07
PCNX4-210ENST00000555740 SOX4Q06945 474 aaPredicted RBP8.34□□□□□ -1.07
PCNX4-210ENST00000555740 PPIGQ13427 754 aaKnown RBP eCLIP8.34□□□□□ -1.07
PCNX4-210ENST00000555740 TRPC3Q13507 836 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 TJAP1Q5JTD0 557 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 SFMBT2Q5VUG0 894 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 GLB1LQ6UWU2 654 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 CACNA2D4Q7Z3S7 1137 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 TMTC1Q8IUR5 882 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 LPPQ93052 612 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 C18orf25Q96B23 403 aaPredicted RBP8.34□□□□□ -1.07
PCNX4-210ENST00000555740 GAD1Q99259 594 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 APOL6Q9BWW8 343 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 ZNF358Q9NW07 568 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 BZW2Q9Y6E2 419 aaKnown RBP8.34□□□□□ -1.07
PCNX4-210ENST00000555740 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.34□□□□□ -1.07
PCNX4-210ENST00000555740 PTPRDP23468 1912 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 ARHGAP6O43182 974 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 NRDCO43847 1150 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 LZTS3O60299 673 aaPredicted RBP8.34□□□□□ -1.07
PCNX4-210ENST00000555740 LRRN2O75325 713 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 LCA5LO95447 670 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 SERPING1P05155 500 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 THP07101 528 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 P4HA1P13674 534 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 ADKP55263 362 aaKnown RBP8.34□□□□□ -1.07
PCNX4-210ENST00000555740 CCL23P55773 120 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 TUSC3Q13454 348 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 DRAP1Q14919 205 aaPredicted RBP8.34□□□□□ -1.07
PCNX4-210ENST00000555740 ASIC2Q16515 512 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 GJB7Q6PEY0 223 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 CYP26C1Q6V0L0 522 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 RRAGAQ7L523 313 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 IRF2BP2Q7Z5L9 587 aa8.34□□□□□ -1.07
PCNX4-210ENST00000555740 RPUSD2Q8IZ73 545 aaKnown RBP8.34□□□□□ -1.07
PCNX4-210ENST00000555740 URGCPQ8TCY9 931 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms