RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 SPATA20Q8TB22 786 aa14.72□□□□□ -0.05
SNX6-203ENST00000555416 TMEM174Q8WUU8 243 aa14.72□□□□□ -0.05
SNX6-203ENST00000555416 C1QTNF1Q9BXJ1 281 aa14.72□□□□□ -0.05
SNX6-203ENST00000555416 ZCWPW1Q9H0M4 648 aa14.72□□□□□ -0.05
SNX6-203ENST00000555416 TMLHEQ9NVH6 421 aa14.72□□□□□ -0.05
SNX6-203ENST00000555416 GDAP2Q9NXN4 497 aa14.72□□□□□ -0.05
SNX6-203ENST00000555416 CHMP5Q9NZZ3 219 aa14.72□□□□□ -0.05
SNX6-203ENST00000555416 TRAF3IP3Q9Y228 551 aa14.72□□□□□ -0.05
SNX6-203ENST00000555416 YIPF1Q9Y548 306 aa14.72□□□□□ -0.05
SNX6-203ENST00000555416 PCDHA5Q9Y5H7 936 aa14.72□□□□□ -0.05
SNX6-203ENST00000555416 SNX9Q9Y5X1 595 aa14.72□□□□□ -0.05
SNX6-203ENST00000555416 TNNC2P02585 160 aa14.71□□□□□ -0.05
SNX6-203ENST00000555416 LAMP2P13473 410 aa14.71□□□□□ -0.05
SNX6-203ENST00000555416 TNNI1P19237 187 aa14.71□□□□□ -0.05
SNX6-203ENST00000555416 CCR2P41597 374 aa14.71□□□□□ -0.05
SNX6-203ENST00000555416 SURF1Q15526 300 aa14.71□□□□□ -0.05
SNX6-203ENST00000555416 SLC39A12Q504Y0 691 aa14.71□□□□□ -0.05
SNX6-203ENST00000555416 C1orf220Q5T0J3 134 aa14.71□□□□□ -0.05
SNX6-203ENST00000555416 CENPPQ6IPU0 288 aa14.71□□□□□ -0.05
SNX6-203ENST00000555416 LIMS2Q7Z4I7 341 aa14.71□□□□□ -0.05
SNX6-203ENST00000555416 PLCD3Q8N3E9 789 aa14.71□□□□□ -0.05
SNX6-203ENST00000555416 GUF1Q8N442 669 aaKnown RBP14.71□□□□□ -0.05
SNX6-203ENST00000555416 GOLGA5Q8TBA6 731 aa14.71□□□□□ -0.05
SNX6-203ENST00000555416 PARD3BQ8TEW8 1205 aa14.71□□□□□ -0.05
SNX6-203ENST00000555416 ING5Q8WYH8 240 aa14.71□□□□□ -0.05
SNX6-203ENST00000555416 ACSF2Q96CM8 615 aaPredicted RBP14.71□□□□□ -0.05
SNX6-203ENST00000555416 TCEAL4Q96EI5 215 aa14.71□□□□□ -0.05
SNX6-203ENST00000555416 EEF2KMTQ96G04 330 aa14.71□□□□□ -0.05
SNX6-203ENST00000555416 HPDLQ96IR7 371 aa14.71□□□□□ -0.05
SNX6-203ENST00000555416 FNBP1Q96RU3 617 aa14.71□□□□□ -0.05
SNX6-203ENST00000555416 DNAJC25Q9H1X3 360 aa14.71□□□□□ -0.05
SNX6-203ENST00000555416 KCNK12Q9HB15 430 aa14.71□□□□□ -0.05
SNX6-203ENST00000555416 EPS15L1Q9UBC2 864 aa14.71□□□□□ -0.05
SNX6-203ENST00000555416 NME7Q9Y5B8 376 aa14.71□□□□□ -0.05
SNX6-203ENST00000555416 VNN1O95497 513 aa14.7□□□□□ -0.06
SNX6-203ENST00000555416 LRG1P02750 347 aa14.7□□□□□ -0.06
SNX6-203ENST00000555416 ACAT1P24752 427 aaKnown RBP14.7□□□□□ -0.06
SNX6-203ENST00000555416 ANP32AP39687 249 aaKnown RBP14.7□□□□□ -0.06
SNX6-203ENST00000555416 PRCPP42785 496 aa14.7□□□□□ -0.06
SNX6-203ENST00000555416 MYL6P60660 151 aa14.7□□□□□ -0.06
SNX6-203ENST00000555416 PABPC1LQ4VXU2 614 aaKnown RBP14.7□□□□□ -0.06
SNX6-203ENST00000555416 TDRD10Q5VZ19 366 aaKnown RBP14.7□□□□□ -0.06
SNX6-203ENST00000555416 CEP135Q66GS9 1140 aa14.7□□□□□ -0.06
SNX6-203ENST00000555416 ISM2Q6H9L7 571 aa14.7□□□□□ -0.06
SNX6-203ENST00000555416 TRIM67Q6ZTA4 783 aa14.7□□□□□ -0.06
SNX6-203ENST00000555416 HFE2Q6ZVN8 426 aa14.7□□□□□ -0.06
SNX6-203ENST00000555416 RTL10Q7L3V2 364 aa14.7□□□□□ -0.06
SNX6-203ENST00000555416 METTL23Q86XA0 190 aa14.7□□□□□ -0.06
SNX6-203ENST00000555416 NPAS3Q8IXF0 933 aa14.7□□□□□ -0.06
SNX6-203ENST00000555416 KBTBD7Q8WVZ9 684 aa14.7□□□□□ -0.06
SNX6-203ENST00000555416 FGF13Q92913 245 aa14.7□□□□□ -0.06
SNX6-203ENST00000555416 CCDC47Q96A33 483 aaKnown RBP14.7□□□□□ -0.06
SNX6-203ENST00000555416 ASIC4Q96FT7 647 aa14.7□□□□□ -0.06
SNX6-203ENST00000555416 TIGD1Q96MW7 591 aa14.7□□□□□ -0.06
SNX6-203ENST00000555416 PKMYT1Q99640 499 aa14.7□□□□□ -0.06
SNX6-203ENST00000555416 CORO1BQ9BR76 489 aa14.7□□□□□ -0.06
SNX6-203ENST00000555416 RPP25Q9BUL9 199 aaKnown RBP14.7□□□□□ -0.06
SNX6-203ENST00000555416 OXCT2Q9BYC2 517 aaPredicted RBP14.7□□□□□ -0.06
SNX6-203ENST00000555416 DSEQ9UL01 958 aa14.7□□□□□ -0.06
SNX6-203ENST00000555416 GABRDO14764 452 aa14.69□□□□□ -0.06
SNX6-203ENST00000555416 NARSO43776 548 aaKnown RBP14.69□□□□□ -0.06
SNX6-203ENST00000555416 HUS1O60921 280 aa14.69□□□□□ -0.06
SNX6-203ENST00000555416 ABCB7O75027 752 aa14.69□□□□□ -0.06
SNX6-203ENST00000555416 ATP2C2O75185 946 aa14.69□□□□□ -0.06
SNX6-203ENST00000555416 MOSPD3O75425 235 aa14.69□□□□□ -0.06
SNX6-203ENST00000555416 AKAP3O75969 853 aa14.69□□□□□ -0.06
SNX6-203ENST00000555416 PDGFBP01127 241 aaPredicted RBP14.69□□□□□ -0.06
SNX6-203ENST00000555416 C4BPAP04003 597 aaKnown RBP14.69□□□□□ -0.06
SNX6-203ENST00000555416 CEBPBP17676 345 aa14.69□□□□□ -0.06
SNX6-203ENST00000555416 LMO2P25791 158 aa14.69□□□□□ -0.06
SNX6-203ENST00000555416 PMS1P54277 932 aaKnown RBP14.69□□□□□ -0.06
SNX6-203ENST00000555416 CLDN10P78369 228 aa14.69□□□□□ -0.06
SNX6-203ENST00000555416 PRSS36Q5K4E3 855 aa14.69□□□□□ -0.06
SNX6-203ENST00000555416 ADGRF2Q8IZF7 708 aa14.69□□□□□ -0.06
SNX6-203ENST00000555416 LPIN3Q9BQK8 851 aa14.69□□□□□ -0.06
SNX6-203ENST00000555416 LRRC3Q9BY71 257 aa14.69□□□□□ -0.06
SNX6-203ENST00000555416 XYLT2Q9H1B5 865 aa14.69□□□□□ -0.06
SNX6-203ENST00000555416 DDX43Q9NXZ2 648 aaKnown RBP14.69□□□□□ -0.06
SNX6-203ENST00000555416 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.69□□□□□ -0.06
SNX6-203ENST00000555416 CDH7Q9ULB5 785 aa14.69□□□□□ -0.06
SNX6-203ENST00000555416 MAFFQ9ULX9 164 aa14.69□□□□□ -0.06
SNX6-203ENST00000555416 SORCS3Q9UPU3 1222 aa14.69□□□□□ -0.06
SNX6-203ENST00000555416 TMEM221A6NGB7 291 aa14.68□□□□□ -0.06
SNX6-203ENST00000555416 ANHXE9PGG2 379 aa14.68□□□□□ -0.06
SNX6-203ENST00000555416 M0R296 226 aa14.68□□□□□ -0.06
SNX6-203ENST00000555416 CALUO43852 315 aaPredicted RBP14.68□□□□□ -0.06
SNX6-203ENST00000555416 CD44P16070 742 aaKnown RBP14.68□□□□□ -0.06
SNX6-203ENST00000555416 GJA1P17302 382 aa14.68□□□□□ -0.06
SNX6-203ENST00000555416 PTPN2P17706 415 aa14.68□□□□□ -0.06
SNX6-203ENST00000555416 ATF6P18850 670 aa14.68□□□□□ -0.06
SNX6-203ENST00000555416 BMP6P22004 513 aa14.68□□□□□ -0.06
SNX6-203ENST00000555416 NR2F2P24468 414 aa14.68□□□□□ -0.06
SNX6-203ENST00000555416 GPR15P49685 360 aa14.68□□□□□ -0.06
SNX6-203ENST00000555416 HTR4Q13639 388 aa14.68□□□□□ -0.06
SNX6-203ENST00000555416 NFIL3Q16649 462 aa14.68□□□□□ -0.06
SNX6-203ENST00000555416 ZNF658Q5TYW1 1059 aaPredicted RBP14.68□□□□□ -0.06
SNX6-203ENST00000555416 PARM1Q6UWI2 310 aa14.68□□□□□ -0.06
SNX6-203ENST00000555416 THEM5Q8N1Q8 247 aa14.68□□□□□ -0.06
SNX6-203ENST00000555416 SLC44A3Q8N4M1 653 aa14.68□□□□□ -0.06
SNX6-203ENST00000555416 TOP6BLQ8N6T0 577 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms