RNA–Protein interactions for RNA: ENST00000554683.1

CNIH1-204, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 3

Gene CNIH1, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-204ENST00000554683 SRGAP2BP0DMP2 458 aa11.5□□□□□ -0.57
CNIH1-204ENST00000554683 PTMSP20962 102 aa11.5□□□□□ -0.57
CNIH1-204ENST00000554683 ATICP31939 592 aa11.5□□□□□ -0.57
CNIH1-204ENST00000554683 PIK3CAP42336 1068 aa11.5□□□□□ -0.57
CNIH1-204ENST00000554683 GCLMP48507 274 aa11.5□□□□□ -0.57
CNIH1-204ENST00000554683 MXI1P50539 228 aa11.5□□□□□ -0.57
CNIH1-204ENST00000554683 MARSP56192 900 aaKnown RBP11.5□□□□□ -0.57
CNIH1-204ENST00000554683 MYL6P60660 151 aa11.5□□□□□ -0.57
CNIH1-204ENST00000554683 NCOA4Q13772 614 aa11.5□□□□□ -0.57
CNIH1-204ENST00000554683 RAB33AQ14088 237 aa11.5□□□□□ -0.57
CNIH1-204ENST00000554683 ZNF699Q32M78 642 aa11.5□□□□□ -0.57
CNIH1-204ENST00000554683 LEXMQ3ZCV2 418 aa11.5□□□□□ -0.57
CNIH1-204ENST00000554683 CTXN3Q4LDR2 81 aa11.5□□□□□ -0.57
CNIH1-204ENST00000554683 DCAF17Q5H9S7 520 aaPredicted RBP11.5□□□□□ -0.57
CNIH1-204ENST00000554683 WSCD1Q658N2 575 aa11.5□□□□□ -0.57
CNIH1-204ENST00000554683 ANKRD54Q6NXT1 300 aa11.5□□□□□ -0.57
CNIH1-204ENST00000554683 LILRA6Q6PI73 481 aa11.5□□□□□ -0.57
CNIH1-204ENST00000554683 FRMD5Q7Z6J6 570 aa11.5□□□□□ -0.57
CNIH1-204ENST00000554683 FILIP1Q7Z7B0 1213 aa11.5□□□□□ -0.57
CNIH1-204ENST00000554683 TOP6BLQ8N6T0 577 aa11.5□□□□□ -0.57
CNIH1-204ENST00000554683 OR10T2Q8NGX3 314 aa11.5□□□□□ -0.57
CNIH1-204ENST00000554683 SPATA18Q8TC71 538 aa11.5□□□□□ -0.57
CNIH1-204ENST00000554683 TAS1R2Q8TE23 839 aa11.5□□□□□ -0.57
CNIH1-204ENST00000554683 SLC35C1Q96A29 364 aa11.5□□□□□ -0.57
CNIH1-204ENST00000554683 SYAP1Q96A49 352 aaPredicted RBP11.5□□□□□ -0.57
CNIH1-204ENST00000554683 TMEM8AQ9HCN3 771 aa11.5□□□□□ -0.57
CNIH1-204ENST00000554683 ARMCX3Q9UH62 379 aaPredicted RBP11.5□□□□□ -0.57
CNIH1-204ENST00000554683 SNX9Q9Y5X1 595 aa11.5□□□□□ -0.57
CNIH1-204ENST00000554683 DOCK8Q8NF50 2099 aa11.5□□□□□ -0.57
CNIH1-204ENST00000554683 PATJQ8NI35 1801 aa11.49□□□□□ -0.57
CNIH1-204ENST00000554683 NOTCH4Q99466 2003 aa11.49□□□□□ -0.57
CNIH1-204ENST00000554683 OR6C75A6NL08 312 aa11.49□□□□□ -0.57
CNIH1-204ENST00000554683 PHACTR2O75167 634 aa11.49□□□□□ -0.57
CNIH1-204ENST00000554683 PAPLNO95428 1278 aa11.49□□□□□ -0.57
CNIH1-204ENST00000554683 ASS1P00966 412 aaKnown RBP11.49□□□□□ -0.57
CNIH1-204ENST00000554683 HLA-DRAP01903 254 aa11.49□□□□□ -0.57
CNIH1-204ENST00000554683 HOXB1P14653 301 aaPredicted RBP11.49□□□□□ -0.57
CNIH1-204ENST00000554683 ERCC5P28715 1186 aaPredicted RBP11.49□□□□□ -0.57
CNIH1-204ENST00000554683 OR1D2P34982 312 aa11.49□□□□□ -0.57
CNIH1-204ENST00000554683 SMAD4Q13485 552 aaKnown RBP11.49□□□□□ -0.57
CNIH1-204ENST00000554683 TRPC3Q13507 836 aa11.49□□□□□ -0.57
CNIH1-204ENST00000554683 STX1AQ16623 288 aa11.49□□□□□ -0.57
CNIH1-204ENST00000554683 SOWAHAQ2M3V2 549 aa11.49□□□□□ -0.57
CNIH1-204ENST00000554683 CCDC40Q4G0X9 1142 aa11.49□□□□□ -0.57
CNIH1-204ENST00000554683 CBWD6Q4V339 395 aa11.49□□□□□ -0.57
CNIH1-204ENST00000554683 CBWD3Q5JTY5 395 aa11.49□□□□□ -0.57
CNIH1-204ENST00000554683 CBWD5Q5RIA9 395 aa11.49□□□□□ -0.57
CNIH1-204ENST00000554683 SYCE2Q6PIF2 218 aa11.49□□□□□ -0.57
CNIH1-204ENST00000554683 EP400NLQ6ZTU2 488 aa11.49□□□□□ -0.57
CNIH1-204ENST00000554683 C11orf57Q6ZUT1 292 aaPredicted RBP11.49□□□□□ -0.57
CNIH1-204ENST00000554683 OSTM1Q86WC4 334 aa11.49□□□□□ -0.57
CNIH1-204ENST00000554683 PALB2Q86YC2 1186 aa11.49□□□□□ -0.57
CNIH1-204ENST00000554683 TRIM59Q8IWR1 403 aa11.49□□□□□ -0.57
CNIH1-204ENST00000554683 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.49□□□□□ -0.57
CNIH1-204ENST00000554683 ADGRF2Q8IZF7 708 aa11.49□□□□□ -0.57
CNIH1-204ENST00000554683 KBTBD7Q8WVZ9 684 aa11.49□□□□□ -0.57
CNIH1-204ENST00000554683 ATXN2LQ8WWM7 1075 aaKnown RBP11.49□□□□□ -0.57
CNIH1-204ENST00000554683 CNOT6LQ96LI5 555 aaKnown RBP11.49□□□□□ -0.57
CNIH1-204ENST00000554683 OXCT2Q9BYC2 517 aaPredicted RBP11.49□□□□□ -0.57
CNIH1-204ENST00000554683 MMRN2Q9H8L6 949 aa11.49□□□□□ -0.57
CNIH1-204ENST00000554683 SFXN1Q9H9B4 322 aa11.49□□□□□ -0.57
CNIH1-204ENST00000554683 METTL14Q9HCE5 456 aaKnown RBP11.49□□□□□ -0.57
CNIH1-204ENST00000554683 CD207Q9UJ71 328 aa11.49□□□□□ -0.57
CNIH1-204ENST00000554683 R3HCC1Q9Y3T6 440 aaKnown RBP11.49□□□□□ -0.57
CNIH1-204ENST00000554683 OBSL1O75147 1896 aa11.49□□□□□ -0.57
CNIH1-204ENST00000554683 GABRDO14764 452 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 HUS1O60921 280 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 ABLIM3O94929 683 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 VNN2O95498 520 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 GNA14O95837 355 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 OR4Q2P0C623 313 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 HOXB8P17481 243 aaPredicted RBP11.48□□□□□ -0.57
CNIH1-204ENST00000554683 KCNQ1P51787 676 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 NOP14P78316 857 aaKnown RBP11.48□□□□□ -0.57
CNIH1-204ENST00000554683 TYRO3Q06418 890 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 CLUL1Q15846 466 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 CT47A1Q5JQC4 288 aaPredicted RBP11.48□□□□□ -0.57
CNIH1-204ENST00000554683 TCERG1LQ5VWI1 586 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 KRT39Q6A163 491 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 IRF2BP1Q8IU81 584 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 TMEM86AQ8N2M4 240 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 KREMEN2Q8NCW0 462 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 CMASQ8NFW8 434 aaPredicted RBP11.48□□□□□ -0.57
CNIH1-204ENST00000554683 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.48□□□□□ -0.57
CNIH1-204ENST00000554683 FEZF2Q8TBJ5 459 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 HDAC7Q8WUI4 952 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 ELMO3Q96BJ8 720 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 TMEM209Q96SK2 561 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 SRRTQ9BXP5 876 aaKnown RBP11.48□□□□□ -0.57
CNIH1-204ENST00000554683 S1PR5Q9H228 398 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 PLEKHA4Q9H4M7 779 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 SMYD3Q9H7B4 428 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 ANO10Q9NW15 660 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 POLIQ9UNA4 740 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 NME7Q9Y5B8 376 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 GREB1Q4ZG55 1949 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 NCOR1O75376 2440 aa11.48□□□□□ -0.57
CNIH1-204ENST00000554683 TTC28Q96AY4 2481 aa11.47□□□□□ -0.57
CNIH1-204ENST00000554683 GRXCR2A6NFK2 248 aa11.47□□□□□ -0.57
CNIH1-204ENST00000554683 DPYSL4O14531 572 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms