RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 CEMIPQ8WUJ3 1361 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 AKAP10O43572 662 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 ADCY3O60266 1144 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 CAMTA2O94983 1202 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 POLBP06746 335 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 RBP3P10745 1247 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 TMEM132DQ14C87 1099 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 STRIP1Q5VSL9 837 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 TTI2Q6NXR4 508 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 TAS2R42Q7RTR8 314 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 PLD3Q8IV08 490 aa14.59□□□□□ -0.07
VTI1B-204ENST00000554659 HSPA1AP0DMV8 641 aaKnown RBP14.58□□□□□ -0.07
VTI1B-204ENST00000554659 HSPA1BP0DMV9 641 aaKnown RBP14.58□□□□□ -0.07
VTI1B-204ENST00000554659 PON1P27169 355 aa14.58□□□□□ -0.07
VTI1B-204ENST00000554659 SERPINB3P29508 390 aa14.58□□□□□ -0.07
VTI1B-204ENST00000554659 HERVK_113P62684 666 aa14.58□□□□□ -0.07
VTI1B-204ENST00000554659 CDC42EP1Q00587 391 aa14.58□□□□□ -0.07
VTI1B-204ENST00000554659 CAVIN3Q969G5 261 aa14.58□□□□□ -0.07
VTI1B-204ENST00000554659 OTULINQ96BN8 352 aa14.58□□□□□ -0.07
VTI1B-204ENST00000554659 AGPAT3Q9NRZ7 376 aa14.58□□□□□ -0.07
VTI1B-204ENST00000554659 MOSPD1Q9UJG1 213 aa14.58□□□□□ -0.07
VTI1B-204ENST00000554659 VCPP55072 806 aaKnown RBP14.58□□□□□ -0.08
VTI1B-204ENST00000554659 LAMB3Q13751 1172 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 PDIA6Q15084 440 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 DEPDC1Q5TB30 811 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 STX19Q8N4C7 294 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 GANCQ8TET4 914 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 PTPRN2Q92932 1015 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 AGAP3Q96P47 875 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 NIF3L1Q9GZT8 377 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 VCPKMTQ9H867 229 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 ANKEF1Q9NU02 776 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 NDFIP2Q9NV92 336 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 ARHGEF38Q9NXL2 777 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 BLOC1S6Q9UL45 172 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 COPG1Q9Y678 874 aaKnown RBP14.58□□□□□ -0.08
VTI1B-204ENST00000554659 GJB7Q6PEY0 223 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 TRIM65Q6PJ69 517 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 MAGEB18Q96M61 343 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 KLF6Q99612 283 aaPredicted RBP14.58□□□□□ -0.08
VTI1B-204ENST00000554659 FAM118BQ9BPY3 351 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 KBTBD4Q9NVX7 518 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 O00370 1275 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 KRT75O95678 551 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 RARGP13631 454 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 NQO1P15559 274 aaKnown RBP14.58□□□□□ -0.08
VTI1B-204ENST00000554659 S100A5P33763 92 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 DNAJC3Q13217 504 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 PDK1Q15118 436 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 B4GALNT2Q8NHY0 566 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 ZNF507Q8TCN5 953 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 KDM4CQ9H3R0 1056 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 WHRNQ9P202 907 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 SNX9Q9Y5X1 595 aa14.58□□□□□ -0.08
VTI1B-204ENST00000554659 CDH2P19022 906 aaPredicted RBP14.57□□□□□ -0.08
VTI1B-204ENST00000554659 GPD1P21695 349 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 RGS7P49802 495 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 ANO4Q32M45 955 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 APPL2Q8NEU8 664 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 TEKT4Q8WW24 435 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 RMDN1Q96DB5 314 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 SH2D3AQ9BRG2 576 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 PDP2Q9P2J9 529 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 MAFGO15525 162 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 CYP11B2P19099 503 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 GPAT2Q6NUI2 795 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 CLEC10AQ8IUN9 316 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 SPON2Q9BUD6 331 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 TEX13BQ9BXU2 312 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.57□□□□□ -0.08
VTI1B-204ENST00000554659 PCDHGB4Q9UN71 923 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 TSPOAP1O95153 1857 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 A0A0A6YYK5 440 aaPredicted RBP14.57□□□□□ -0.08
VTI1B-204ENST00000554659 AIM2O14862 343 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 EFCAB14O75071 495 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 RXRBP28702 533 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 BAATQ14032 418 aaPredicted RBP14.57□□□□□ -0.08
VTI1B-204ENST00000554659 CHI3L2Q15782 390 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 CDC42EP5Q6NZY7 148 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 ASIC4Q96FT7 647 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 ELMO2Q96JJ3 720 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 ZFYVE19Q96K21 471 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 GPBP1L1Q9HC44 474 aaPredicted RBP14.57□□□□□ -0.08
VTI1B-204ENST00000554659 PHTF1Q9UMS5 762 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 CHD1O14646 1710 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 EEF2KO00418 725 aaKnown RBP14.57□□□□□ -0.08
VTI1B-204ENST00000554659 HSPA13P48723 471 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 TOB1P50616 345 aaPredicted RBP14.57□□□□□ -0.08
VTI1B-204ENST00000554659 COG2Q14746 738 aa14.57□□□□□ -0.08
VTI1B-204ENST00000554659 AFF4Q9UHB7 1163 aaKnown RBP14.57□□□□□ -0.08
VTI1B-204ENST00000554659 NR3C2P08235 984 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 ACADSBP45954 432 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 SCTRP47872 440 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 FBXW4P57775 412 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 ACBD5Q5T8D3 534 aaPredicted RBP14.56□□□□□ -0.08
VTI1B-204ENST00000554659 PLEKHM3Q6ZWE6 761 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 NUP93Q8N1F7 819 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 ATPAF2Q8N5M1 289 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 DUSP10Q9Y6W6 482 aa14.56□□□□□ -0.08
VTI1B-204ENST00000554659 POLRMTO00411 1230 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms