RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 PAX3P23760 479 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 NMT1P30419 496 aaKnown RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 YWHABP31946 246 aaKnown RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 FOXN2P32314 431 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 PTPN9P43378 593 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 MARCKSL1P49006 195 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 MFAP3P55082 362 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 BPIFB4P59827 614 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 OCRLQ01968 901 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 OGDHQ02218 1023 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 TSR1Q2NL82 804 aaKnown RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 C5orf22Q49AR2 442 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 TRNP1Q6NT89 227 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 PADI6Q6TGC4 694 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 SND1Q7KZF4 910 aaKnown RBP eCLIP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 KIAA1328Q86T90 577 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 MCPH1Q8NEM0 835 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 GRK7Q8WTQ7 553 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 OXNAD1Q96HP4 312 aaPredicted RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 MAELQ96JY0 434 aaKnown RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 KRT12Q99456 494 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 CCDC106Q9BWC9 280 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 CPVLQ9H3G5 476 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 CYP3A43Q9HB55 503 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 GBA2Q9HCG7 927 aaPredicted RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 RAB20Q9NX57 234 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 FNIP2Q9P278 1114 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 SAP30BPQ9UHR5 308 aaKnown RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 CYTH4Q9UIA0 394 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 NME7Q9Y5B8 376 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 PASKQ96RG2 1323 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 LRP4O75096 1905 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 MBLAC1A4D2B0 266 aaPredicted RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 CCDC169A6NNP5 214 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 FAM155AB1AL88 458 aaPredicted RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 CHUKO15111 745 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 FARP2O94887 1054 aaPredicted RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 UNC5CO95185 931 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 KRT14P02533 472 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 VIMP08670 466 aaKnown RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 RHOXF2BP0C7M4 288 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 SETSIPP0DME0 302 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 ECE1P42892 770 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 PAFAH1B1P43034 410 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 SCNN1DP51172 638 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 GNGT1P63211 74 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 GTF2IP78347 998 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 CBX2Q14781 532 aaPredicted RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 LRRC41Q15345 812 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 SURF1Q15526 300 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 SNRNP35Q16560 246 aaKnown RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 PPP1R26Q5T8A7 1209 aaPredicted RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 LRCH2Q5VUJ6 765 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 ALG1LQ6GMV1 187 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 DHRS4L2Q6PKH6 230 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 MICALCLQ6ZW33 695 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 PCGF5Q86SE9 256 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 TMEM110Q86TL2 294 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 ZDHHC17Q8IUH5 632 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 GSPT2Q8IYD1 628 aaKnown RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 TTC39CQ8N584 583 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 C7orf31Q8N865 590 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 FBXO36Q8NEA4 188 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 CDHR1Q96JP9 859 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 TSGA13Q96PP4 275 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 HHIPQ96QV1 700 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 FMO2Q99518 471 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 ACO2Q99798 780 aaKnown RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 RHOXF2Q9BQY4 288 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 KLC2Q9H0B6 622 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 FAM207AQ9NSI2 230 aaPredicted RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 MORF4L1Q9UBU8 362 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 ADAMTS1Q9UHI8 967 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 PNMA3Q9UL41 463 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 PADI4Q9UM07 663 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 EXOC7Q9UPT5 735 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 SCINQ9Y6U3 715 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 DENND3A2RUS2 1198 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 WASH4PA8MWX3 477 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 NFKBIEO00221 500 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 POLR3GO15318 223 aaPredicted RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 COBLO75128 1261 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 PEX11AO75192 247 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 ASNSP08243 561 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 CD48P09326 243 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 DLDP09622 509 aaKnown RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 CYP3A5P20815 502 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 GLRA2P23416 452 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 CHKAP35790 457 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 GYS2P54840 703 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 VCPP55072 806 aaKnown RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 PLCB3Q01970 1234 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 NSUN2Q08J23 767 aaKnown RBP eCLIP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 CRYMQ14894 314 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 NOMO1Q15155 1222 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 TBCCQ15814 346 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 AOC3Q16853 763 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 INSCQ1MX18 579 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 P3H1Q32P28 736 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 GPAT2Q6NUI2 795 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms