RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 PTPRJQ12913 1337 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 NUP210Q8TEM1 1887 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-213ENST00000554600 ANAPC1Q9H1A4 1944 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 KIF26AQ9ULI4 1882 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-213ENST00000554600 MTMR11A4FU01 709 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 CALUO43852 315 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-213ENST00000554600 PHACTR2O75167 634 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 PAPLNO95428 1278 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 POU2F2P09086 479 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 MYL4P12829 197 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 ANP32AP39687 249 aaKnown RBP11.47□□□□□ -0.57
SHMT2-213ENST00000554600 ALDH1A3P47895 512 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 EPHB3P54753 998 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 TSPY1Q01534 308 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 DPYDQ12882 1025 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 PLD1Q13393 1074 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 PNOCQ13519 176 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 TDGQ13569 410 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 PSMD6Q15008 389 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 CYP4A22Q5TCH4 519 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 PDZD4Q76G19 769 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-213ENST00000554600 ALYREFQ86V81 257 aaKnown RBP11.47□□□□□ -0.57
SHMT2-213ENST00000554600 SUGP1Q8IWZ8 645 aaKnown RBP11.47□□□□□ -0.57
SHMT2-213ENST00000554600 ATAD1Q8NBU5 361 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 OR10T2Q8NGX3 314 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 FAM200AQ8TCP9 573 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 RSAD2Q8WXG1 361 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 FGF13Q92913 245 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 HPDLQ96IR7 371 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 CGRRF1Q99675 332 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 SEPT5Q99719 369 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-213ENST00000554600 EPS15L1Q9UBC2 864 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 SIX4Q9UIU6 781 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 FBXL21Q9UKT6 434 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 CDH7Q9ULB5 785 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 MAFFQ9ULX9 164 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 TICRRQ7Z2Z1 1910 aa11.47□□□□□ -0.57
SHMT2-213ENST00000554600 PDXKO00764 312 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 PRPF40AO75400 957 aaKnown RBP11.46□□□□□ -0.57
SHMT2-213ENST00000554600 RHOBTB3O94955 611 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 NR3C1P04150 777 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 MYL7Q01449 175 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 FAM160A1Q05DH4 1040 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 BIRC3Q13489 604 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 TRPC3Q13507 836 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 TAF12Q16514 161 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 CEP135Q66GS9 1140 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 SCARA3Q6AZY7 606 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 CENPPQ6IPU0 288 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 TRAPPC11Q7Z392 1133 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 C12orf56Q8IXR9 622 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 DCP1BQ8IZD4 617 aaKnown RBP11.46□□□□□ -0.57
SHMT2-213ENST00000554600 ADGRF2Q8IZF7 708 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 HS6ST3Q8IZP7 471 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 FMR1NBQ8N0W7 255 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-213ENST00000554600 PDCL2Q8N4E4 241 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 MCRS1Q96EZ8 462 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 BORCS6Q96GS4 357 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 MFSD14AQ96MC6 490 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 MMS19Q96T76 1030 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 ZCWPW1Q9H0M4 648 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 MFSD1Q9H3U5 465 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 ASAH2Q9NR71 780 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 DDX43Q9NXZ2 648 aaKnown RBP11.46□□□□□ -0.57
SHMT2-213ENST00000554600 ABI2Q9NYB9 513 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-213ENST00000554600 CEP72Q9P209 647 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 HOOK1Q9UJC3 728 aaKnown RBP11.46□□□□□ -0.57
SHMT2-213ENST00000554600 CIZ1Q9ULV3 898 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-213ENST00000554600 L1RE1Q9UN81 338 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 FRMD4BQ9Y2L6 1034 aa11.46□□□□□ -0.57
SHMT2-213ENST00000554600 ZFP37Q9Y6Q3 630 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-213ENST00000554600 ZNF197O14709 1029 aa11.45□□□□□ -0.58
SHMT2-213ENST00000554600 SOAT2O75908 522 aa11.45□□□□□ -0.58
SHMT2-213ENST00000554600 SMC2O95347 1197 aa11.45□□□□□ -0.58
SHMT2-213ENST00000554600 VNN2O95498 520 aa11.45□□□□□ -0.58
SHMT2-213ENST00000554600 CEBPBP17676 345 aa11.45□□□□□ -0.58
SHMT2-213ENST00000554600 RFX1P22670 979 aa11.45□□□□□ -0.58
SHMT2-213ENST00000554600 ACAT1P24752 427 aaKnown RBP11.45□□□□□ -0.58
SHMT2-213ENST00000554600 CASP4P49662 377 aa11.45□□□□□ -0.58
SHMT2-213ENST00000554600 HTR4Q13639 388 aa11.45□□□□□ -0.58
SHMT2-213ENST00000554600 KCNB1Q14721 858 aa11.45□□□□□ -0.58
SHMT2-213ENST00000554600 SLC5A9Q2M3M2 681 aa11.45□□□□□ -0.58
SHMT2-213ENST00000554600 MGAT5BQ3V5L5 792 aa11.45□□□□□ -0.58
SHMT2-213ENST00000554600 MTSS1LQ765P7 747 aa11.45□□□□□ -0.58
SHMT2-213ENST00000554600 NPAS3Q8IXF0 933 aa11.45□□□□□ -0.58
SHMT2-213ENST00000554600 TMEM86AQ8N2M4 240 aa11.45□□□□□ -0.58
SHMT2-213ENST00000554600 TTC9BQ8N6N2 239 aa11.45□□□□□ -0.58
SHMT2-213ENST00000554600 TCEAL4Q96EI5 215 aa11.45□□□□□ -0.58
SHMT2-213ENST00000554600 RTP3Q9BQQ7 232 aa11.45□□□□□ -0.58
SHMT2-213ENST00000554600 CRISPLD1Q9H336 500 aa11.45□□□□□ -0.58
SHMT2-213ENST00000554600 KCTD10Q9H3F6 313 aa11.45□□□□□ -0.58
SHMT2-213ENST00000554600 SLITRK6Q9H5Y7 841 aa11.45□□□□□ -0.58
SHMT2-213ENST00000554600 RMND1Q9NWS8 449 aa11.45□□□□□ -0.58
SHMT2-213ENST00000554600 GDAP2Q9NXN4 497 aa11.45□□□□□ -0.58
SHMT2-213ENST00000554600 NUMBLQ9Y6R0 609 aa11.45□□□□□ -0.58
SHMT2-213ENST00000554600 F5P12259 2224 aa11.44□□□□□ -0.58
SHMT2-213ENST00000554600 NARSO43776 548 aaKnown RBP11.44□□□□□ -0.58
SHMT2-213ENST00000554600 KINO60870 393 aaKnown RBP11.44□□□□□ -0.58
SHMT2-213ENST00000554600 PDGFBP01127 241 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-213ENST00000554600 CFHP08603 1231 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms