RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 TNFSF9P41273 254 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 CXCL12P48061 93 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 GUCY2FP51841 1108 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 ATXN1P54253 815 aaKnown RBP9.58□□□□□ -0.88
TDP1-208ENST00000553989 UBE2HP62256 183 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 SATB1Q01826 763 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 MCL1Q07820 350 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 SPEM2Q0P670 501 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 DUSP4Q13115 394 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 FZD5Q13467 585 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 SIM2Q14190 667 aaPredicted RBP9.58□□□□□ -0.88
TDP1-208ENST00000553989 DHX8Q14562 1220 aaKnown RBP9.58□□□□□ -0.88
TDP1-208ENST00000553989 TAF12Q16514 161 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 IL17AQ16552 155 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 KYAT1Q16773 422 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 ARHGAP15Q53QZ3 475 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 RILPL1Q5EBL4 403 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 LAIR1Q6GTX8 287 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 OVOS1Q6IE37 1185 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 ARMCX5Q6P1M9 558 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 C1orf228Q6PIY5 440 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 HAUS6Q7Z4H7 955 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.58□□□□□ -0.88
TDP1-208ENST00000553989 SYT2Q8N9I0 419 aaPredicted RBP9.58□□□□□ -0.88
TDP1-208ENST00000553989 TTC8Q8TAM2 541 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 NELL1Q92832 810 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 MSANTD3Q96H12 275 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 NAP1L5Q96NT1 182 aaPredicted RBP9.58□□□□□ -0.88
TDP1-208ENST00000553989 GCNAQ96QF7 691 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 SEPT5Q99719 369 aaPredicted RBP9.58□□□□□ -0.88
TDP1-208ENST00000553989 MMTAG2Q9BU76 263 aaKnown RBP9.58□□□□□ -0.88
TDP1-208ENST00000553989 ATXN3LQ9H3M9 355 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 ZHX3Q9H4I2 956 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 RPF1Q9H9Y2 349 aaKnown RBP9.58□□□□□ -0.88
TDP1-208ENST00000553989 TRPV5Q9NQA5 729 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.58□□□□□ -0.88
TDP1-208ENST00000553989 KCND2Q9NZV8 630 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 SLC27A5Q9Y2P5 690 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 GPR179Q6PRD1 2367 aa9.58□□□□□ -0.88
TDP1-208ENST00000553989 TICRRQ7Z2Z1 1910 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 DCDC2BA2VCK2 349 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 MTMR11A4FU01 709 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 SHISA7A6NL88 538 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 LACTBL1A8MY62 500 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 H3BQV1 296 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 CHADO15335 359 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 FAM13AO94988 1023 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 OAZ2O95190 189 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 FGF19O95750 216 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 TPM3P06753 285 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 CYP3A5P20815 502 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 LRPAP1P30533 357 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 SOX9P48436 509 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 EPHA5P54756 1037 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 ATP2C1P98194 919 aaPredicted RBP9.57□□□□□ -0.88
TDP1-208ENST00000553989 GPR17Q13304 367 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 VEPH1Q14D04 833 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 MGAT5BQ3V5L5 792 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 STXBP5Q5T5C0 1151 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 CCDC183Q5T5S1 534 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 GPR158Q5T848 1215 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 HEATR6Q6AI08 1181 aaKnown RBP9.57□□□□□ -0.88
TDP1-208ENST00000553989 ITIH5Q86UX2 942 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 ARID3BQ8IVW6 561 aaPredicted RBP9.57□□□□□ -0.88
TDP1-208ENST00000553989 PARP9Q8IXQ6 854 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 MYCT1Q8N699 235 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 CELF5Q8N6W0 485 aaKnown RBP9.57□□□□□ -0.88
TDP1-208ENST00000553989 BEST2Q8NFU1 509 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 PNMA5Q96PV4 448 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 NTPCRQ9BSD7 190 aaKnown RBP9.57□□□□□ -0.88
TDP1-208ENST00000553989 RTKNQ9BST9 563 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 MSTO1Q9BUK6 570 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 C8orf33Q9H7E9 229 aaPredicted RBP9.57□□□□□ -0.88
TDP1-208ENST00000553989 TRPV4Q9HBA0 871 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 RBM12Q9NTZ6 932 aaKnown RBP9.57□□□□□ -0.88
TDP1-208ENST00000553989 TMEM63CQ9P1W3 806 aa9.57□□□□□ -0.88
TDP1-208ENST00000553989 NCANO14594 1321 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 CACNA1AO00555 2505 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 ZNF292O60281 2723 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.56□□□□□ -0.88
TDP1-208ENST00000553989 TTC26A0AVF1 554 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 SYCE3A1L190 88 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 CHURC1-FNTBB4DL54 471 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 OGTO15294 1046 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 TBCAO75347 108 aaKnown RBP9.56□□□□□ -0.88
TDP1-208ENST00000553989 SOAT2O75908 522 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 CHRNB1P11230 501 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 TYMPP19971 482 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 SYT1P21579 422 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 GABRR2P28476 465 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 FNTBP49356 437 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 CDR1P51861 262 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 SLC12A3P55017 1021 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 NCKAP1LP55160 1127 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 MYBPC2Q14324 1141 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 SLC39A12Q504Y0 691 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 ARHGAP29Q52LW3 1261 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 HYIQ5T013 277 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 JADE1Q6IE81 842 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 CENPPQ6IPU0 288 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms