RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 IPO4Q8TEX9 1081 aaKnown RBP4.57□□□□□ -1.68
TDP1-207ENST00000553617 IPCEF1Q8WWN9 437 aaPredicted RBP4.57□□□□□ -1.68
TDP1-207ENST00000553617 EID2BQ96D98 161 aa4.57□□□□□ -1.68
TDP1-207ENST00000553617 PPM1MQ96MI6 270 aa4.57□□□□□ -1.68
TDP1-207ENST00000553617 SPATA5L1Q9BVQ7 753 aa4.57□□□□□ -1.68
TDP1-207ENST00000553617 FBXO34Q9NWN3 711 aa4.57□□□□□ -1.68
TDP1-207ENST00000553617 MID2Q9UJV3 735 aa4.57□□□□□ -1.68
TDP1-207ENST00000553617 FBXO9Q9UK97 447 aaPredicted RBP4.57□□□□□ -1.68
TDP1-207ENST00000553617 ITGB1BP2Q9UKP3 347 aa4.57□□□□□ -1.68
TDP1-207ENST00000553617 CAPN11Q9UMQ6 739 aa4.57□□□□□ -1.68
TDP1-207ENST00000553617 IRAK3Q9Y616 596 aa4.57□□□□□ -1.68
TDP1-207ENST00000553617 ZNF785A8K8V0 405 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 E9PLN8 166 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 EYA2O00167 538 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 MATN2O00339 956 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 IPO5O00410 1097 aaKnown RBP4.56□□□□□ -1.68
TDP1-207ENST00000553617 CHEK2O96017 543 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 ALAS1P13196 640 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 BTF3P20290 206 aaKnown RBP4.56□□□□□ -1.68
TDP1-207ENST00000553617 FDXRP22570 491 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 COPAP53621 1224 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 PTTG1IPP53801 180 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 NPEPPSP55786 919 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 CLRN1P58418 232 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 GRM1Q13255 1194 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 MLANAQ16655 118 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 BMT2Q1RMZ1 405 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 ANKS6Q68DC2 871 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 BORAQ6PGQ7 559 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 FBXO38Q6PIJ6 1188 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 KIAA0408Q6ZU52 694 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 GPRIN1Q7Z2K8 1008 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 RALYLQ86SE5 291 aaKnown RBP4.56□□□□□ -1.68
TDP1-207ENST00000553617 USP37Q86T82 979 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 YAF2Q8IY57 180 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 NAXEQ8NCW5 288 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 DNERQ8NFT8 737 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 STYXQ8WUJ0 223 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 USP13Q92995 863 aaPredicted RBP4.56□□□□□ -1.68
TDP1-207ENST00000553617 SPSB4Q96A44 273 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 LRRC46Q96FV0 321 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 VKORC1Q9BQB6 163 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 EIF2AK1Q9BQI3 630 aaKnown RBP4.56□□□□□ -1.68
TDP1-207ENST00000553617 PAGR1Q9BTK6 254 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 STK31Q9BXU1 1019 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 MAGEB5Q9BZ81 275 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 NCDNQ9UBB6 729 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 XPR1Q9UBH6 696 aa4.56□□□□□ -1.68
TDP1-207ENST00000553617 TBKBP1A7MCY6 615 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 M0QYG6 137 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 EIF3FO00303 357 aaPredicted RBP4.55□□□□□ -1.68
TDP1-207ENST00000553617 IRAK2O43187 625 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 HOXA3O43365 443 aaPredicted RBP4.55□□□□□ -1.68
TDP1-207ENST00000553617 STC2O76061 302 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 TNFRSF6BO95407 300 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 CYP1A1P04798 512 aaPredicted RBP4.55□□□□□ -1.68
TDP1-207ENST00000553617 PYGLP06737 847 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 EGR1P18146 543 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 GLDCP23378 1020 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 ACVR2AP27037 513 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 VIPR2P41587 438 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 ZNF135P52742 658 aaPredicted RBP4.55□□□□□ -1.68
TDP1-207ENST00000553617 WNT3P56703 355 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 MXRA7P84157 204 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 RIN1Q13671 783 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 SSPNQ14714 243 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 UBXN2BQ14CS0 331 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 TAF5Q15542 800 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 CSRP2Q16527 193 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 SLC4A8Q2Y0W8 1093 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 UTP14CQ5TAP6 766 aaKnown RBP4.55□□□□□ -1.68
TDP1-207ENST00000553617 ARL6IP4Q66PJ3 421 aaKnown RBP4.55□□□□□ -1.68
TDP1-207ENST00000553617 MCTP2Q6DN12 878 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 USP17L6PQ6QN14 398 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 ZDHHC24Q6UX98 284 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 DOK3Q7L591 496 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 GAS2L3Q86XJ1 694 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 CARFQ8N187 725 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 MPP5Q8N3R9 675 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 AOPEPQ8N6M6 819 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 PPHLN1Q8NEY8 458 aaKnown RBP4.55□□□□□ -1.68
TDP1-207ENST00000553617 ADAMTS17Q8TE56 1095 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 SNX27Q96L92 541 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 PWWP2AQ96N64 755 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 KLHL32Q96NJ5 620 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 KATNAL1Q9BW62 490 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 LSM14BQ9BX40 385 aaKnown RBP4.55□□□□□ -1.68
TDP1-207ENST00000553617 DHX36Q9H2U1 1008 aaKnown RBP4.55□□□□□ -1.68
TDP1-207ENST00000553617 GSTO2Q9H4Y5 243 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 AGO3Q9H9G7 860 aaKnown RBP4.55□□□□□ -1.68
TDP1-207ENST00000553617 XPNPEP3Q9NQH7 507 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 TBC1D23Q9NUY8 699 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 USP40Q9NVE5 1235 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 SWAP70Q9UH65 585 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 SCAF8Q9UPN6 1271 aaKnown RBP4.55□□□□□ -1.68
TDP1-207ENST00000553617 TMX2Q9Y320 296 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 NR2E1Q9Y466 385 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 SLC4A7Q9Y6M7 1214 aa4.55□□□□□ -1.68
TDP1-207ENST00000553617 UBE2QL1A1L167 161 aa4.54□□□□□ -1.68
TDP1-207ENST00000553617 RRN3P2A6NIE6 340 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms