RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	CEP350	Q5VT06	3117 aa		13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	FAM170A	A1A519	330 aa		13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	ARL5C	A6NH57	179 aa		13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	KPNA7	A9QM74	516 aa		13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	ATMIN	O43313	823 aa	Predicted RBP	13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	BUB1B	O60566	1050 aa	Predicted RBP	13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	TADA3	O75528	432 aa		13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	MYC	P01106	439 aa	Predicted RBP	13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	TH	P07101	528 aa		13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	NDST1	P52848	882 aa		13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	CKAP4	Q07065	602 aa	Known RBP	13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	PEX26	Q7Z412	305 aa		13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	LIMS2	Q7Z4I7	341 aa		13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	CTU1	Q7Z7A3	348 aa	Known RBP	13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	DAAM2	Q86T65	1068 aa		13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	UNC93A	Q86WB7	457 aa		13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	ECHDC2	Q86YB7	292 aa		13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	GSTCD	Q8NEC7	633 aa		13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	ZNF564	Q8TBZ8	553 aa	Predicted RBP	13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	OSBPL9	Q96SU4	736 aa		13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	NUP85	Q9BW27	656 aa		13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	NT5C1A	Q9BXI3	368 aa		13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	CRISPLD2	Q9H0B8	497 aa		13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	LHX5	Q9H2C1	402 aa		13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	ABCB6	Q9NP58	842 aa		13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	RGS18	Q9NS28	235 aa		13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	ADAM22	Q9P0K1	906 aa		13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	STXBP5L	Q9Y2K9	1186 aa		13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	CEP83	Q9Y592	693 aa		13.5	□□□□□ -0.25
CACNB3-223	ENST00000552480	EFCAB8	A8MWE9	144 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	PITPNM1	O00562	1244 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	DYNC1I1	O14576	645 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	SPTLC1	O15269	473 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	INPPL1	O15357	1258 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	SRGAP2	O75044	1071 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	KIF4A	O95239	1232 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	CALB1	P05937	261 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	FAM163B	P0C2L3	166 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	SSTR3	P32745	418 aa	Predicted RBP	13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	SCNN1G	P51170	649 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	PTP4A2	Q12974	167 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	ORC1	Q13415	861 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	RPS6KA1	Q15418	735 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	STIL	Q15468	1287 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	CNGA2	Q16280	664 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	SOWAHA	Q2M3V2	549 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	SGO2	Q562F6	1265 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	ZNF598	Q86UK7	904 aa	Known RBP	13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	NT5DC3	Q86UY8	548 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	TOP6BL	Q8N6T0	577 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	LRRN4CL	Q8ND94	238 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	C1orf131	Q8NDD1	294 aa	Known RBP	13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	UBE2Q2	Q8WVN8	375 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	HEXIM2	Q96MH2	286 aa	Known RBP	13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	MRPL45	Q9BRJ2	306 aa	Known RBP	13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	C11orf70	Q9BRQ4	267 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	FTHL17	Q9BXU8	183 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	DNAI2	Q9GZS0	605 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	MIOS	Q9NXC5	875 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	AMFR	Q9UKV5	643 aa		13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
CACNB3-223	ENST00000552480		C9IYK1	514 aa		13.48	□□□□□ -0.25
CACNB3-223	ENST00000552480	CES2	O00748	559 aa		13.48	□□□□□ -0.25
CACNB3-223	ENST00000552480	MMP8	P22894	467 aa		13.48	□□□□□ -0.25
CACNB3-223	ENST00000552480	RRM1	P23921	792 aa		13.48	□□□□□ -0.25
CACNB3-223	ENST00000552480	RPL9	P32969	192 aa	Known RBP	13.48	□□□□□ -0.25
CACNB3-223	ENST00000552480	LILRA4	P59901	499 aa		13.48	□□□□□ -0.25
CACNB3-223	ENST00000552480	GRIK3	Q13003	919 aa		13.48	□□□□□ -0.25
CACNB3-223	ENST00000552480	DENND1B	Q6P3S1	775 aa		13.48	□□□□□ -0.25
CACNB3-223	ENST00000552480	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.48	□□□□□ -0.25
CACNB3-223	ENST00000552480	MMS22L	Q6ZRQ5	1243 aa		13.48	□□□□□ -0.25
CACNB3-223	ENST00000552480	DPH6	Q7L8W6	267 aa		13.48	□□□□□ -0.25
CACNB3-223	ENST00000552480	RNF169	Q8NCN4	708 aa		13.48	□□□□□ -0.25
CACNB3-223	ENST00000552480	APPL2	Q8NEU8	664 aa		13.48	□□□□□ -0.25
CACNB3-223	ENST00000552480	LINC01599	Q8WXQ3	324 aa		13.48	□□□□□ -0.25
CACNB3-223	ENST00000552480	ZNF333	Q96JL9	665 aa		13.48	□□□□□ -0.25
CACNB3-223	ENST00000552480	GOLPH3	Q9H4A6	298 aa		13.48	□□□□□ -0.25
CACNB3-223	ENST00000552480	SCIN	Q9Y6U3	715 aa		13.48	□□□□□ -0.25
CACNB3-223	ENST00000552480	SCN1A	P35498	2009 aa		13.47	□□□□□ -0.25
CACNB3-223	ENST00000552480	TANC1	Q9C0D5	1861 aa		13.47	□□□□□ -0.25
CACNB3-223	ENST00000552480	CTAGE15	A4D2H0	777 aa		13.47	□□□□□ -0.25
CACNB3-223	ENST00000552480		O00370	1275 aa		13.47	□□□□□ -0.25
CACNB3-223	ENST00000552480	PODXL	O00592	558 aa		13.47	□□□□□ -0.25
CACNB3-223	ENST00000552480	ZNF185	O15231	689 aa		13.47	□□□□□ -0.25
CACNB3-223	ENST00000552480	HUS1	O60921	280 aa		13.47	□□□□□ -0.25
CACNB3-223	ENST00000552480	MICAL2	O94851	1124 aa		13.47	□□□□□ -0.25
CACNB3-223	ENST00000552480	EOMES	O95936	686 aa		13.47	□□□□□ -0.25
CACNB3-223	ENST00000552480	TFRC	P02786	760 aa	Known RBP	13.47	□□□□□ -0.25
CACNB3-223	ENST00000552480	CTAGE8	P0CG41	777 aa		13.47	□□□□□ -0.25
CACNB3-223	ENST00000552480	HSPA8	P11142	646 aa	Known RBP	13.47	□□□□□ -0.25
CACNB3-223	ENST00000552480	WARS	P23381	471 aa	Known RBP	13.47	□□□□□ -0.25
CACNB3-223	ENST00000552480	MNX1	P50219	401 aa	Predicted RBP	13.47	□□□□□ -0.25
CACNB3-223	ENST00000552480	TUBB4B	P68371	445 aa		13.47	□□□□□ -0.25
CACNB3-223	ENST00000552480	FAM189B	P81408	668 aa		13.47	□□□□□ -0.25
CACNB3-223	ENST00000552480	PLEKHA7	Q6IQ23	1121 aa		13.47	□□□□□ -0.25
CACNB3-223	ENST00000552480	LCLAT1	Q6UWP7	414 aa		13.47	□□□□□ -0.25
CACNB3-223	ENST00000552480	SLC39A5	Q6ZMH5	540 aa		13.47	□□□□□ -0.25
CACNB3-223	ENST00000552480	SLC24A5	Q71RS6	500 aa		13.47	□□□□□ -0.25
CACNB3-223	ENST00000552480	ANKRD33	Q7Z3H0	272 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms