RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 NEUROD6Q96NK8 337 aa4.75□□□□□ -1.65
LSM6P2-201ENST00000552208 GPHA2Q96T91 129 aa4.75□□□□□ -1.65
LSM6P2-201ENST00000552208 FAM167BQ9BTA0 163 aa4.75□□□□□ -1.65
LSM6P2-201ENST00000552208 DDX23Q9BUQ8 820 aaKnown RBP4.75□□□□□ -1.65
LSM6P2-201ENST00000552208 STK31Q9BXU1 1019 aa4.75□□□□□ -1.65
LSM6P2-201ENST00000552208 PACSIN1Q9BY11 444 aa4.75□□□□□ -1.65
LSM6P2-201ENST00000552208 MCOLN1Q9GZU1 580 aa4.75□□□□□ -1.65
LSM6P2-201ENST00000552208 OSBPL5Q9H0X9 879 aaPredicted RBP4.75□□□□□ -1.65
LSM6P2-201ENST00000552208 UNC45AQ9H3U1 944 aa4.75□□□□□ -1.65
LSM6P2-201ENST00000552208 WASH6PQ9NQA3 447 aa4.75□□□□□ -1.65
LSM6P2-201ENST00000552208 JADE2Q9NQC1 790 aa4.75□□□□□ -1.65
LSM6P2-201ENST00000552208 XPNPEP3Q9NQH7 507 aa4.75□□□□□ -1.65
LSM6P2-201ENST00000552208 TBC1D23Q9NUY8 699 aa4.75□□□□□ -1.65
LSM6P2-201ENST00000552208 IFT80Q9P2H3 777 aaPredicted RBP4.75□□□□□ -1.65
LSM6P2-201ENST00000552208 MID2Q9UJV3 735 aa4.75□□□□□ -1.65
LSM6P2-201ENST00000552208 ITGB1BP2Q9UKP3 347 aa4.75□□□□□ -1.65
LSM6P2-201ENST00000552208 AGAP1Q9UPQ3 857 aa4.75□□□□□ -1.65
LSM6P2-201ENST00000552208 PRSS47A8MTI9 375 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 hCG_1984214I3L0E3 225 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 KIAA0391O15091 583 aaKnown RBP4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 PJA2O43164 708 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 RNASEH2AO75792 299 aaKnown RBP4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 CD4P01730 458 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 POLBP06746 335 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 GRPP07492 148 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 ZNF888P0CJ79 500 aaPredicted RBP4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 RAP2AP10114 183 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 PIM1P11309 404 aaPredicted RBP4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 EGR1P18146 543 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 ATP5JP18859 108 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 CAPN3P20807 821 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 CST5P28325 142 aaPredicted RBP4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 LIMS1P48059 325 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 GZMKP49863 264 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 PTTG1IPP53801 180 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 PTH1RQ03431 593 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 NFYCQ13952 458 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 NPY5RQ15761 445 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 TAF12Q16514 161 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 KCNMB1Q16558 191 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 CRB2Q5IJ48 1285 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 TMTC4Q5T4D3 741 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 FCRL6Q6DN72 434 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 SULT6B1Q6IMI4 303 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 KRTAP5-3Q6L8H2 238 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 ZDHHC24Q6UX98 284 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 RSRC2Q7L4I2 434 aaKnown RBP4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 PPP1R32Q7Z5V6 425 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 ADGRE4PQ86SQ3 457 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 USP37Q86T82 979 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 KRT73Q86Y46 540 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 YAF2Q8IY57 180 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 TMEFF1Q8IYR6 380 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 CMTM4Q8IZR5 234 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 ANKRD53Q8N9V6 530 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 DNERQ8NFT8 737 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 NLGN4YQ8NFZ3 816 aaPredicted RBP4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 SCAMP4Q969E2 229 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 SPSB4Q96A44 273 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 SEC62Q99442 399 aaKnown RBP4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 CNPPD1Q9BV87 410 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 SPATA5L1Q9BVQ7 753 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 DHX36Q9H2U1 1008 aaKnown RBP4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 MLXIPQ9HAP2 919 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 VPS45Q9NRW7 570 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 USP40Q9NVE5 1235 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 ADAM29Q9UKF5 820 aa4.74□□□□□ -1.65
LSM6P2-201ENST00000552208 TTBK1Q5TCY1 1321 aaPredicted RBP4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 ITIH6Q6UXX5 1313 aa4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 E9PLN8 166 aa4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 BIN1O00499 593 aa4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 HOXC11O43248 304 aaPredicted RBP4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 ASNA1O43681 348 aa4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 SASH1O94885 1247 aa4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 MBD4O95243 580 aa4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 GNAI2P04899 355 aa4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 SNRPA1P09661 255 aaKnown RBP4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 ACVR2AP27037 513 aa4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 ADD2P35612 726 aa4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 TUBP50607 506 aa4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 GP2P55259 537 aaKnown RBP4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 POLE2P56282 527 aa4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 WNT3P56703 355 aa4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 MXRA7P84157 204 aa4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 KCTD2Q14681 263 aa4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 USP10Q14694 798 aaKnown RBP4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 TIGD6Q17RP2 521 aa4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 TRIM71Q2Q1W2 868 aaKnown RBP4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 NBPF8Q3BBV2 869 aa4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 RAP1GAP2Q684P5 730 aa4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 FAM180BQ6P0A1 224 aa4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 ZNF529Q6P280 563 aa4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 KRBA2Q6ZNG9 492 aa4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 USP30Q70CQ3 517 aa4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 TBC1D1Q86TI0 1168 aaPredicted RBP4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 ESX1Q8N693 406 aa4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 OR5M3Q8NGP4 307 aa4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 FNIP1Q8TF40 1166 aa4.73□□□□□ -1.65
LSM6P2-201ENST00000552208 RILPL2Q969X0 211 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms