RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 CYP3A43Q9HB55 503 aa22.98■■□□□ 1.27
NEK3-202ENST00000550841 TAB2Q9NYJ8 693 aa22.98■■□□□ 1.27
NEK3-202ENST00000550841 L1RE1Q9UN81 338 aa22.98■■□□□ 1.27
NEK3-202ENST00000550841 CNPP09543 421 aaKnown RBP22.97■■□□□ 1.27
NEK3-202ENST00000550841 MRPS5P82675 430 aaKnown RBP22.97■■□□□ 1.27
NEK3-202ENST00000550841 FILIP1LQ4L180 1135 aa22.97■■□□□ 1.27
NEK3-202ENST00000550841 MIIPQ5JXC2 388 aa22.97■■□□□ 1.27
NEK3-202ENST00000550841 FKBP15Q5T1M5 1219 aa22.97■■□□□ 1.27
NEK3-202ENST00000550841 ADGRF2Q8IZF7 708 aa22.97■■□□□ 1.27
NEK3-202ENST00000550841 NT5C1BQ96P26 610 aa22.97■■□□□ 1.27
NEK3-202ENST00000550841 ASB2Q96Q27 587 aa22.97■■□□□ 1.27
NEK3-202ENST00000550841 DNAI2Q9GZS0 605 aa22.97■■□□□ 1.27
NEK3-202ENST00000550841 NIF3L1Q9GZT8 377 aa22.97■■□□□ 1.27
NEK3-202ENST00000550841 VPS16Q9H269 839 aa22.97■■□□□ 1.27
NEK3-202ENST00000550841 SNX25Q9H3E2 840 aa22.97■■□□□ 1.27
NEK3-202ENST00000550841 FAM124BQ9H5Z6 455 aaPredicted RBP22.97■■□□□ 1.27
NEK3-202ENST00000550841 CDH23Q9H251 3354 aa22.97■■□□□ 1.27
NEK3-202ENST00000550841 VWA8A3KMH1 1905 aa22.96■■□□□ 1.27
NEK3-202ENST00000550841 MYO7AQ13402 2215 aa22.96■■□□□ 1.27
NEK3-202ENST00000550841 TNFRSF10AO00220 468 aa22.96■■□□□ 1.27
NEK3-202ENST00000550841 TEX28O15482 410 aa22.96■■□□□ 1.27
NEK3-202ENST00000550841 TBC1D4O60343 1298 aa22.96■■□□□ 1.27
NEK3-202ENST00000550841 WARSP23381 471 aaKnown RBP22.96■■□□□ 1.27
NEK3-202ENST00000550841 GNL1P36915 607 aaPredicted RBP22.96■■□□□ 1.27
NEK3-202ENST00000550841 COPB1P53618 953 aaKnown RBP22.96■■□□□ 1.27
NEK3-202ENST00000550841 EXOC3L4Q17RC7 722 aa22.96■■□□□ 1.27
NEK3-202ENST00000550841 TCEAL5Q5H9L2 206 aa22.96■■□□□ 1.27
NEK3-202ENST00000550841 SPOPLQ6IQ16 392 aa22.96■■□□□ 1.27
NEK3-202ENST00000550841 TTC39CQ8N584 583 aa22.96■■□□□ 1.27
NEK3-202ENST00000550841 FAM81BQ96LP2 452 aa22.96■■□□□ 1.27
NEK3-202ENST00000550841 CLSTN3Q9BQT9 956 aa22.96■■□□□ 1.27
NEK3-202ENST00000550841 FBXL5Q9UKA1 691 aa22.96■■□□□ 1.27
NEK3-202ENST00000550841 PCDHGC5Q9Y5F6 944 aa22.96■■□□□ 1.27
NEK3-202ENST00000550841 GABRDO14764 452 aa22.95■■□□□ 1.26
NEK3-202ENST00000550841 TBXAS1P24557 533 aaPredicted RBP22.95■■□□□ 1.26
NEK3-202ENST00000550841 PCSK1P29120 753 aa22.95■■□□□ 1.26
NEK3-202ENST00000550841 NRIP1P48552 1158 aa22.95■■□□□ 1.26
NEK3-202ENST00000550841 DUSP6Q16828 381 aa22.95■■□□□ 1.26
NEK3-202ENST00000550841 SLC8B1Q6J4K2 584 aa22.95■■□□□ 1.26
NEK3-202ENST00000550841 RBM23Q86U06 439 aaKnown RBP22.95■■□□□ 1.26
NEK3-202ENST00000550841 MICALL1Q8N3F8 863 aa22.95■■□□□ 1.26
NEK3-202ENST00000550841 LMO3Q8TAP4 145 aa22.95■■□□□ 1.26
NEK3-202ENST00000550841 ACBD6Q9BR61 282 aa22.95■■□□□ 1.26
NEK3-202ENST00000550841 APOBEC3GQ9HC16 384 aaKnown RBP22.95■■□□□ 1.26
NEK3-202ENST00000550841 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.95■■□□□ 1.26
NEK3-202ENST00000550841 DDX43Q9NXZ2 648 aaKnown RBP22.95■■□□□ 1.26
NEK3-202ENST00000550841 GCNT4Q9P109 453 aa22.95■■□□□ 1.26
NEK3-202ENST00000550841 DPP7Q9UHL4 492 aa22.95■■□□□ 1.26
NEK3-202ENST00000550841 POLIQ9UNA4 740 aa22.95■■□□□ 1.26
NEK3-202ENST00000550841 PRUNE2Q8WUY3 3088 aa22.94■■□□□ 1.26
NEK3-202ENST00000550841 CHD9Q3L8U1 2897 aa22.94■■□□□ 1.26
NEK3-202ENST00000550841 CLASP2O75122 1294 aaKnown RBP22.94■■□□□ 1.26
NEK3-202ENST00000550841 ATP1A3P13637 1013 aa22.94■■□□□ 1.26
NEK3-202ENST00000550841 OR1D2P34982 312 aa22.94■■□□□ 1.26
NEK3-202ENST00000550841 YWHAEP62258 255 aaKnown RBP22.94■■□□□ 1.26
NEK3-202ENST00000550841 RAB33AQ14088 237 aa22.94■■□□□ 1.26
NEK3-202ENST00000550841 ELMSAN1Q6PJG2 1045 aa22.94■■□□□ 1.26
NEK3-202ENST00000550841 ADGRD2Q7Z7M1 963 aa22.94■■□□□ 1.26
NEK3-202ENST00000550841 OR6B3Q8NGW1 331 aa22.94■■□□□ 1.26
NEK3-202ENST00000550841 TATDN2Q93075 761 aa22.94■■□□□ 1.26
NEK3-202ENST00000550841 CRACR2AQ9BSW2 395 aa22.94■■□□□ 1.26
NEK3-202ENST00000550841 BCO2Q9BYV7 579 aa22.94■■□□□ 1.26
NEK3-202ENST00000550841 INTS2Q9H0H0 1204 aaKnown RBP22.94■■□□□ 1.26
NEK3-202ENST00000550841 MAFFQ9ULX9 164 aa22.94■■□□□ 1.26
NEK3-202ENST00000550841 CDY1Q9Y6F8 540 aa22.94■■□□□ 1.26
NEK3-202ENST00000550841 PRRC2BQ5JSZ5 2229 aaKnown RBP22.94■■□□□ 1.26
NEK3-202ENST00000550841 PER2O15055 1255 aa22.93■■□□□ 1.26
NEK3-202ENST00000550841 SERPINC1P01008 464 aa22.93■■□□□ 1.26
NEK3-202ENST00000550841 SRGAP2BP0DMP2 458 aa22.93■■□□□ 1.26
NEK3-202ENST00000550841 RPL17P18621 184 aaKnown RBP22.93■■□□□ 1.26
NEK3-202ENST00000550841 TRIM21P19474 475 aaKnown RBP22.93■■□□□ 1.26
NEK3-202ENST00000550841 ASPAP45381 313 aa22.93■■□□□ 1.26
NEK3-202ENST00000550841 TSPY1Q01534 308 aa22.93■■□□□ 1.26
NEK3-202ENST00000550841 SMARCB1Q12824 385 aa22.93■■□□□ 1.26
NEK3-202ENST00000550841 DCP1BQ8IZD4 617 aaKnown RBP22.93■■□□□ 1.26
NEK3-202ENST00000550841 IGFLR1Q9H665 355 aa22.93■■□□□ 1.26
NEK3-202ENST00000550841 CDH9Q9ULB4 789 aa22.93■■□□□ 1.26
NEK3-202ENST00000550841 LGALS16A8MUM7 142 aa22.92■■□□□ 1.26
NEK3-202ENST00000550841 LRRN2O75325 713 aa22.92■■□□□ 1.26
NEK3-202ENST00000550841 CDH8P55286 799 aa22.92■■□□□ 1.26
NEK3-202ENST00000550841 HYAL1Q12794 435 aa22.92■■□□□ 1.26
NEK3-202ENST00000550841 LRMPQ12912 555 aa22.92■■□□□ 1.26
NEK3-202ENST00000550841 TPGS2Q68CL5 300 aa22.92■■□□□ 1.26
NEK3-202ENST00000550841 SCARA5Q6ZMJ2 495 aa22.92■■□□□ 1.26
NEK3-202ENST00000550841 UNC93AQ86WB7 457 aa22.92■■□□□ 1.26
NEK3-202ENST00000550841 EFHBQ8N7U6 833 aa22.92■■□□□ 1.26
NEK3-202ENST00000550841 ZNF461Q8TAF7 563 aa22.92■■□□□ 1.26
NEK3-202ENST00000550841 KBTBD7Q8WVZ9 684 aa22.92■■□□□ 1.26
NEK3-202ENST00000550841 MRPL45Q9BRJ2 306 aaKnown RBP22.92■■□□□ 1.26
NEK3-202ENST00000550841 SMYD3Q9H7B4 428 aa22.92■■□□□ 1.26
NEK3-202ENST00000550841 A8MXQ7 604 aa22.91■■□□□ 1.26
NEK3-202ENST00000550841 GLUD1P00367 558 aa22.91■■□□□ 1.26
NEK3-202ENST00000550841 WEE2P0C1S8 567 aa22.91■■□□□ 1.26
NEK3-202ENST00000550841 CPB1P15086 417 aa22.91■■□□□ 1.26
NEK3-202ENST00000550841 PON1P27169 355 aa22.91■■□□□ 1.26
NEK3-202ENST00000550841 ARPP19P56211 112 aa22.91■■□□□ 1.26
NEK3-202ENST00000550841 UBXN1Q04323 297 aa22.91■■□□□ 1.26
NEK3-202ENST00000550841 CUL2Q13617 745 aa22.91■■□□□ 1.26
NEK3-202ENST00000550841 SKIV2LQ15477 1246 aaKnown RBP22.91■■□□□ 1.26
NEK3-202ENST00000550841 MAPRE1Q15691 268 aaKnown RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms