RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 CAMK4Q16566 473 aa14.5□□□□□ -0.09
NUP188-211ENST00000550219 SPATA1Q5VX52 437 aa14.5□□□□□ -0.09
NUP188-211ENST00000550219 UNC13DQ70J99 1090 aa14.5□□□□□ -0.09
NUP188-211ENST00000550219 SYAP1Q96A49 352 aaPredicted RBP14.5□□□□□ -0.09
NUP188-211ENST00000550219 ZSWIM3Q96MP5 696 aa14.5□□□□□ -0.09
NUP188-211ENST00000550219 ASB16Q96NS5 453 aa14.5□□□□□ -0.09
NUP188-211ENST00000550219 TMEM209Q96SK2 561 aa14.5□□□□□ -0.09
NUP188-211ENST00000550219 BLZF1Q9H2G9 400 aa14.5□□□□□ -0.09
NUP188-211ENST00000550219 IKZF4Q9H2S9 585 aa14.5□□□□□ -0.09
NUP188-211ENST00000550219 CRISPLD1Q9H336 500 aa14.5□□□□□ -0.09
NUP188-211ENST00000550219 KIAA1468Q9P260 1216 aa14.5□□□□□ -0.09
NUP188-211ENST00000550219 CPSF3Q9UKF6 684 aaKnown RBP14.5□□□□□ -0.09
NUP188-211ENST00000550219 PCDHA5Q9Y5H7 936 aa14.5□□□□□ -0.09
NUP188-211ENST00000550219 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.5□□□□□ -0.09
NUP188-211ENST00000550219 PATJQ8NI35 1801 aa14.5□□□□□ -0.09
NUP188-211ENST00000550219 A0A1W2PRU2 124 aa14.49□□□□□ -0.09
NUP188-211ENST00000550219 OR6C75A6NL08 312 aa14.49□□□□□ -0.09
NUP188-211ENST00000550219 SOAT2O75908 522 aa14.49□□□□□ -0.09
NUP188-211ENST00000550219 OAZ2O95190 189 aa14.49□□□□□ -0.09
NUP188-211ENST00000550219 VNN2O95498 520 aa14.49□□□□□ -0.09
NUP188-211ENST00000550219 SCP2P22307 547 aa14.49□□□□□ -0.09
NUP188-211ENST00000550219 GDI1P31150 447 aa14.49□□□□□ -0.09
NUP188-211ENST00000550219 VIPR2P41587 438 aa14.49□□□□□ -0.09
NUP188-211ENST00000550219 DUSP4Q13115 394 aa14.49□□□□□ -0.09
NUP188-211ENST00000550219 PLD1Q13393 1074 aa14.49□□□□□ -0.09
NUP188-211ENST00000550219 CAVIN1Q6NZI2 390 aaKnown RBP14.49□□□□□ -0.09
NUP188-211ENST00000550219 VITQ6UXI7 678 aa14.49□□□□□ -0.09
NUP188-211ENST00000550219 TTC9BQ8N6N2 239 aa14.49□□□□□ -0.09
NUP188-211ENST00000550219 SHKBP1Q8TBC3 707 aa14.49□□□□□ -0.09
NUP188-211ENST00000550219 ZSCAN18Q8TBC5 510 aaPredicted RBP14.49□□□□□ -0.09
NUP188-211ENST00000550219 DNASE1L2Q92874 299 aa14.49□□□□□ -0.09
NUP188-211ENST00000550219 SMARCD2Q92925 531 aa14.49□□□□□ -0.09
NUP188-211ENST00000550219 SENP8Q96LD8 212 aa14.49□□□□□ -0.09
NUP188-211ENST00000550219 GSDMAQ96QA5 445 aa14.49□□□□□ -0.09
NUP188-211ENST00000550219 FIZ1Q96SL8 496 aa14.49□□□□□ -0.09
NUP188-211ENST00000550219 TRMT61BQ9BVS5 477 aaKnown RBP14.49□□□□□ -0.09
NUP188-211ENST00000550219 SLC27A5Q9Y2P5 690 aa14.49□□□□□ -0.09
NUP188-211ENST00000550219 ZFHX2Q9C0A1 2572 aaPredicted RBP14.49□□□□□ -0.09
NUP188-211ENST00000550219 NCANO14594 1321 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.48□□□□□ -0.09
NUP188-211ENST00000550219 MTMR11A4FU01 709 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 SPTLC1O15269 473 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 MOSPD3O75425 235 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 SMC2O95347 1197 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 RPN1P04843 607 aaKnown RBP14.48□□□□□ -0.09
NUP188-211ENST00000550219 GAP43P17677 238 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 TYMPP19971 482 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 ALDH1A3P47895 512 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 EPHB3P54753 998 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 ASIC1P78348 528 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 GTF2BQ00403 316 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 CSTF1Q05048 431 aaKnown RBP14.48□□□□□ -0.09
NUP188-211ENST00000550219 KCNB1Q14721 858 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 C9orf57Q5W0N0 161 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 ARMCX5Q6P1M9 558 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 ZNF852Q6ZMS4 543 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 CCDC65Q8IXS2 484 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 MAML2Q8IZL2 1156 aaPredicted RBP14.48□□□□□ -0.09
NUP188-211ENST00000550219 ATAD1Q8NBU5 361 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 LEMD2Q8NC56 503 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 FAM200AQ8TCP9 573 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 POMGNT1Q8WZA1 660 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 ERCC4Q92889 916 aaPredicted RBP14.48□□□□□ -0.09
NUP188-211ENST00000550219 KCNN1Q92952 543 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 SEPT5Q99719 369 aaPredicted RBP14.48□□□□□ -0.09
NUP188-211ENST00000550219 OXCT2Q9BYC2 517 aaPredicted RBP14.48□□□□□ -0.09
NUP188-211ENST00000550219 DNAJC25Q9H1X3 360 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 PANK4Q9NVE7 773 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 TBC1D7Q9P0N9 293 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 SEL1LQ9UBV2 794 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 AGO2Q9UKV8 859 aaKnown RBP14.48□□□□□ -0.09
NUP188-211ENST00000550219 MAFFQ9ULX9 164 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 MRPS17Q9Y2R5 130 aaKnown RBP14.48□□□□□ -0.09
NUP188-211ENST00000550219 COL4A2P08572 1712 aa14.48□□□□□ -0.09
NUP188-211ENST00000550219 TICRRQ7Z2Z1 1910 aa14.47□□□□□ -0.09
NUP188-211ENST00000550219 MYO15AQ9UKN7 3530 aa14.47□□□□□ -0.09
NUP188-211ENST00000550219 NCAM2O15394 837 aa14.47□□□□□ -0.09
NUP188-211ENST00000550219 MICAL2O94851 1124 aa14.47□□□□□ -0.09
NUP188-211ENST00000550219 RHOBTB3O94955 611 aa14.47□□□□□ -0.09
NUP188-211ENST00000550219 PSMC3P17980 439 aa14.47□□□□□ -0.09
NUP188-211ENST00000550219 ABCD1P33897 745 aa14.47□□□□□ -0.09
NUP188-211ENST00000550219 EPHA5P54756 1037 aa14.47□□□□□ -0.09
NUP188-211ENST00000550219 LILRA4P59901 499 aa14.47□□□□□ -0.09
NUP188-211ENST00000550219 GPR17Q13304 367 aa14.47□□□□□ -0.09
NUP188-211ENST00000550219 KMT5BQ4FZB7 885 aa14.47□□□□□ -0.09
NUP188-211ENST00000550219 STXBP5Q5T5C0 1151 aa14.47□□□□□ -0.09
NUP188-211ENST00000550219 TSSK4Q6SA08 328 aa14.47□□□□□ -0.09
NUP188-211ENST00000550219 TMC8Q8IU68 726 aa14.47□□□□□ -0.09
NUP188-211ENST00000550219 GPIHBP1Q8IV16 184 aa14.47□□□□□ -0.09
NUP188-211ENST00000550219 CD302Q8IX05 232 aa14.47□□□□□ -0.09
NUP188-211ENST00000550219 OR10T2Q8NGX3 314 aa14.47□□□□□ -0.09
NUP188-211ENST00000550219 NOC3LQ8WTT2 800 aaKnown RBP14.47□□□□□ -0.09
NUP188-211ENST00000550219 DEPDC1BQ8WUY9 529 aa14.47□□□□□ -0.09
NUP188-211ENST00000550219 IRF7Q92985 503 aa14.47□□□□□ -0.09
NUP188-211ENST00000550219 SMARCE1Q969G3 411 aa14.47□□□□□ -0.09
NUP188-211ENST00000550219 TSPAN18Q96SJ8 248 aa14.47□□□□□ -0.09
NUP188-211ENST00000550219 OSBPL6Q9BZF3 934 aa14.47□□□□□ -0.09
NUP188-211ENST00000550219 SEMA4AQ9H3S1 761 aa14.47□□□□□ -0.09
NUP188-211ENST00000550219 MRPL44Q9H9J2 332 aaKnown RBP14.47□□□□□ -0.09
NUP188-211ENST00000550219 OLFML3Q9NRN5 406 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms